Ribosomal RNA and rDNA sequence analyses

Stackebrandt, Erko, Liesack, Werner and Witt, Dagmar (1992) Ribosomal RNA and rDNA sequence analyses. Gene, 115 1-2: 255-260. doi:10.1016/0378-1119(92)90567-9


Author Stackebrandt, Erko
Liesack, Werner
Witt, Dagmar
Title Ribosomal RNA and rDNA sequence analyses
Journal name Gene   Check publisher's open access policy
ISSN 0378-1119
Publication date 1992-06-15
Sub-type Article (original research)
DOI 10.1016/0378-1119(92)90567-9
Open Access Status Not yet assessed
Volume 115
Issue 1-2
Start page 255
End page 260
Total pages 6
Language eng
Subject 1311 Genetics
Abstract The potential of ribosomal (r) RNA and the encoding genes (rDNA) to elucidate natural relationship has been dramatically extended by improved sequencing approaches and the application of polymerase chain reaction. Sequence information on 16S and 23S rRNA/DNA from 69 strains of 53 Streptomyces species allows determination of regions that can be used as target sites for diagnostic probes, and for amplification and sequencing primers. To generate phylogenetic trees, sequence similarities are converted into distance values. The topologies of the trees based on different parts of the molecule are compared among each other and to the numerical phenotypic clustering of the strains.
Keyword diagnostic probes
PCR
phenetic clusters
phylogeny
sequence data analysis
Streptomyces
tree topology
Q-Index Code C1
Q-Index Status Provisional Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
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Created: Fri, 29 Dec 2017, 06:59:27 EST