Bio2RDF release 2: Improved coverage, interoperability and provenance of life science linked data

Callahan, Alison, Cruz-Toledo, Jose, Ansell, Peter and Dumontier, Michel (2013). Bio2RDF release 2: Improved coverage, interoperability and provenance of life science linked data. In: Philipp Cimiano, Oscar Corcho, Valentina Presutti, Laura Hollink and Sebastian Rudolph, The Semantic Web: Semantics and Big Data - 10th International Conference, ESWC 2013, Proceedings. 10th International Conference on The Semantic Web: Semantics and Big Data, ESWC 2013, Montpellier, France, (200-212). 26 - 30 May 2013. doi:10.1007/978-3-642-38288-8_14


Author Callahan, Alison
Cruz-Toledo, Jose
Ansell, Peter
Dumontier, Michel
Title of paper Bio2RDF release 2: Improved coverage, interoperability and provenance of life science linked data
Conference name 10th International Conference on The Semantic Web: Semantics and Big Data, ESWC 2013
Conference location Montpellier, France
Conference dates 26 - 30 May 2013
Proceedings title The Semantic Web: Semantics and Big Data - 10th International Conference, ESWC 2013, Proceedings   Check publisher's open access policy
Journal name Lecture Notes in Computer Science   Check publisher's open access policy
Place of Publication Heidelberg, Germany
Publisher Springer
Publication Year 2013
Year available 2013
Sub-type Fully published paper
DOI 10.1007/978-3-642-38288-8_14
Open Access Status DOI
ISBN 9783642382871
9783642382888
ISSN 0302-9743
1611-3349
Editor Philipp Cimiano
Oscar Corcho
Valentina Presutti
Laura Hollink
Sebastian Rudolph
Volume 7882
Start page 200
End page 212
Total pages 13
Language eng
Abstract/Summary Bio2RDF currently provides the largest network of Linked Data for the Life Sciences. Here, we describe a significant update to increase the overall quality of RDFized datasets generated from open scripts powered by an API to generate registry-validated IRIs, dataset provenance and metrics, SPARQL endpoints, downloadable RDF and database files. We demonstrate federated SPARQL queries within and across the Bio2RDF network, including semantic integration using the Semanticscience Integrated Ontology (SIO). This work forms a strong foundation for increased coverage and continuous integration of data in the life sciences.
Subjects 1700 Computer Science
2614 Theoretical Computer Science
Keyword Life Sciences
Linked Data
Semantic Web
Q-Index Code E1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Conference Paper
Sub-type: Fully published paper
Collections: Official 2014 Collection
School of Information Technology and Electrical Engineering Publications
 
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