Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T))

Riedel, Thomas, Held, Brittany, Nolan, Matt, Lucas, Susan, Lapidus, Alla, Tice, Hope, Del Rio, Tijana Glavina, Cheng, Jan-Fang, Han, Cliff, Tapia, Roxanne, Goodwin, Lynne A., Pitluck, Sam, Liolios, Konstantinos, Mavromatis, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mikhailova, Natalia, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Rohde, Manfred, Tindall, Brian J., Detter, John C., Goeker, Markus, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter and Woyke, Tanja (2012) Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)). Standards in Genomic Sciences, 7 1: 107-119. doi:10.4056/sigs.3216895

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Author Riedel, Thomas
Held, Brittany
Nolan, Matt
Lucas, Susan
Lapidus, Alla
Tice, Hope
Del Rio, Tijana Glavina
Cheng, Jan-Fang
Han, Cliff
Tapia, Roxanne
Goodwin, Lynne A.
Pitluck, Sam
Liolios, Konstantinos
Mavromatis, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Rohde, Manfred
Tindall, Brian J.
Detter, John C.
Goeker, Markus
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Woyke, Tanja
Title Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T))
Formatted title
Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282T)
Journal name Standards in Genomic Sciences   Check publisher's open access policy
ISSN 1944-3277
Publication date 2012-01-01
Year available 2012
Sub-type Article (original research)
DOI 10.4056/sigs.3216895
Open Access Status DOI
Volume 7
Issue 1
Start page 107
End page 119
Total pages 13
Place of publication East Lansing, MI, United States
Publisher Michigan State University Genomic Standards Consortium
Language eng
Formatted abstract
Gillisia limnaea Van Trappen et al. 2004 is the type species of the genus Gillisia, which is a mem-ber of the well characterized family Flavobacteriaceae. The genome of G. limnea R-8282 T is the first sequenced genome (permanent draft) from a type strain of the genus Gillisia. Here we de-scribe the features of this organism, together with the permanent-draft genome sequence and an-notation. The 3,966,857 bp long chromosome (two scaffolds) with its 3,569 protein-coding and 51 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keyword Aerobic
Motile
Rod-shaped
Moderately halotolerant
Psychrophilic
Chemohete-rotrophic
Proteorhodopsin
Microbial mat
Yellow-pigmented
Flavobacteriaceae
GEBA
Q-Index Code C1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Official 2013 Collection
School of Chemistry and Molecular Biosciences
 
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Citation counts: TR Web of Science Citation Count  Cited 6 times in Thomson Reuters Web of Science Article | Citations
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Created: Fri, 01 Mar 2013, 20:39:55 EST by Mrs Louise Nimwegen on behalf of School of Chemistry & Molecular Biosciences