Complete genome sequence of Oceanithermus profundus type strain (506(T))

Pati, Amrita, Zhang, Xiaojing, Lapidus, Alla, Nolan, Matt, Lucas, Susan, Del Rio, Tijana Glavina, Tice, Hope, Cheng, Jan-Fang, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Ivanova, Natalia, Mavromatis, Konstantinos, Chen, Amy, Palaniappan, Krishna, Hauser, Loren, Jeffries, Cynthia D., Brambilla, Evelyne-Marie, Röhl, Alina, Mwirichia, Romano, Rohde, Manfred, Tindall, Brian J., Sikorski, Johannes, Wirth, Reinhard, Göker, Markus, Woyke, Tanja, Detter, John C., Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter and Land, Miriam (2011) Complete genome sequence of Oceanithermus profundus type strain (506(T)). Standards in Genomic Sciences, 4 2: 210-220. doi:10.4056/sigs.1734292

Attached Files (Some files may be inaccessible until you login with your UQ eSpace credentials)
Name Description MIMEType Size Downloads
UQ245501_peer_review.pdf UQ245501_peer_review.pdf application/pdf 68.95KB 0

Author Pati, Amrita
Zhang, Xiaojing
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Del Rio, Tijana Glavina
Tice, Hope
Cheng, Jan-Fang
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mavromatis, Konstantinos
Chen, Amy
Palaniappan, Krishna
Hauser, Loren
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Röhl, Alina
Mwirichia, Romano
Rohde, Manfred
Tindall, Brian J.
Sikorski, Johannes
Wirth, Reinhard
Göker, Markus
Woyke, Tanja
Detter, John C.
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Land, Miriam
Title Complete genome sequence of Oceanithermus profundus type strain (506(T))
Formatted title
Complete genome sequence of Oceanithermus profundus type strain (506T)
Journal name Standards in Genomic Sciences   Check publisher's open access policy
ISSN 1944-3277
Publication date 2011-04-29
Sub-type Article (original research)
DOI 10.4056/sigs.1734292
Open Access Status DOI
Volume 4
Issue 2
Start page 210
End page 220
Total pages 11
Place of publication East Lansing, MI, U.S.A.
Publisher Genomic Standards Consortium, Michigan State University
Language eng
Formatted abstract
Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keyword Microaerophilic
Non-motile
Gram-negative
Nitrate-reducing
Moderate thermophilic
Neutrophilic
Chemolithoheterotrophic
Hydrothermal vent
Thermaceae
GEBA
Extremely radiation-resistant
Fatty-acid-composition
Sea hydrothermal vent
Sp-nov.
Gen. nov.
Thermophilic bacterium
Thermus-aquaticus
Sp. nov.
Meiothermus
Deinococcus
Q-Index Code C1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Official 2012 Collection
School of Chemistry and Molecular Biosciences
 
Versions
Version Filter Type
Citation counts: TR Web of Science Citation Count  Cited 3 times in Thomson Reuters Web of Science Article | Citations
Scopus Citation Count Cited 3 times in Scopus Article | Citations
Google Scholar Search Google Scholar
Created: Sun, 14 Aug 2011, 10:44:35 EST by System User on behalf of School of Chemistry & Molecular Biosciences