Expressed sequence tag analysis of genes expressed during development of the tropical abalone Haliotis asinina

Jackson, Daniel J. and Degnan, Bernard M. (2006) Expressed sequence tag analysis of genes expressed during development of the tropical abalone Haliotis asinina. Journal of Shellfish Research, 25 1: 225-231. doi:10.2983/0730-8000(2006)25[225:ESTAOG]2.0.CO;2

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Author Jackson, Daniel J.
Degnan, Bernard M.
Title Expressed sequence tag analysis of genes expressed during development of the tropical abalone Haliotis asinina
Journal name Journal of Shellfish Research   Check publisher's open access policy
ISSN 0730-8000
1943-6319
Publication date 2006-01-01
Year available 2006
Sub-type Article (original research)
DOI 10.2983/0730-8000(2006)25[225:ESTAOG]2.0.CO;2
Volume 25
Issue 1
Start page 225
End page 231
Total pages 7
Place of publication Hanover, PA, United States
Publisher National Shellfisheries Association
Collection year 2006
Language eng
Subject C1
270201 Gene Expression
630303 Aquaculture
Abstract The tropical abalone. Haliotis asinina. is,in ideal species to investigate the molecular mechanisms that control development. growth, reproduction and shell formation in all cultured haliotids. Here we describe the analysis of 232 expressed sequence tags (EST) obtained front a developmental H. asinina cDNA library intended for future microarray studies. From this data set we identified 183 unique gene Clusters. Of these, 90 clusters showed significant homology with sequences lodged in GenBank, ranging in function from general housekeeping to signal transduction, gene regulation and cell-cell communication. Seventy-one clusters possessed completely novel ORFs greater than 50 codons in length, highlighting the paucity of sequence data from molluscs and other lophotrochozoans. This study of developmental gene expression in H. asinina provides the foundation for further detailed analyses of abalone growth, development and reproduction.
Keyword Abalone
Est
Lophotrochozoan
Development
Haliotis Asinine
Fisheries
Marine & Freshwater Biology
Gastropod Haliotis
Conserved Role
Heron Reef
Metamorphosis
Patterns
Aquaculture
Rufescens
Parentage
Culture
Growth
Q-Index Code C1
Institutional Status UQ

 
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Created: Wed, 15 Aug 2007, 18:44:43 EST