Wheatgenome.info: a resource for wheat genomics resource

Lai, Kaitao (2016). Wheatgenome.info: a resource for wheat genomics resource. In Plant bioinformatics: methods and protocols Second edition ed. (pp. 203-213) New York, NY, United States: Humana Press. doi:10.1007/978-1-4939-3167-5_10

Author Lai, Kaitao
Title of chapter Wheatgenome.info: a resource for wheat genomics resource
Title of book Plant bioinformatics: methods and protocols
Place of Publication New York, NY, United States
Publisher Humana Press
Publication Year 2016
Sub-type Research book chapter (original research)
DOI 10.1007/978-1-4939-3167-5_10
Open Access Status Not yet assessed
Year available 2016
Series Methods in molecular biology
Edition Second edition
ISBN 9781493931668
ISSN 1064-3745
Volume number 1374
Chapter number 10
Start page 203
End page 213
Total pages 11
Total chapters 18
Collection year 2017
Language eng
Abstract/Summary An integrated database with a variety of Web-based systems named WheatGenome.info hosting wheat genome and genomic data has been developed to support wheat research and crop improvement. The resource includes multiple Web-based applications, which are implemented as a variety of Web-based systems. These include a GBrowse2-based wheat genome viewer with BLAST search portal, TAGdb for searching wheat second generation genome sequence data, wheat autoSNPdb, links to wheat genetic maps using CMap and CMap3D, and a wheat genome Wiki to allow interaction between diverse wheat genome sequencing activities. This portal provides links to a variety of wheat genome resources hosted at other research organizations. This integrated database aims to accelerate wheat genome research and is freely accessible via the web interface at http://www.wheatgenome.info/.
Keyword Comparative map
Genetic map
Genome viewer
Integrated database
Second-generation DNA sequencing
Triticum aestivum
Q-Index Code B1
Q-Index Status Provisional Code
Institutional Status UQ

Document type: Book Chapter
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School of Agriculture and Food Sciences
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