The YH database: the first Asian diploid genome database

Li, Guoqing, Ma, Lijia, Song, Chao, Yang, Zhentao, Wang, Xiulan, Huang, Hui, Li, Yingrui, Li, Ruiqiang, Zhang, Xiuqing, Yang, Huanming, Wang, Jian and Wang, Jun (2009) The YH database: the first Asian diploid genome database. Nucleic Acids Research, 37 SUPPL. 1: D1025-D1028. doi:10.1093/nar/gkn966


Author Li, Guoqing
Ma, Lijia
Song, Chao
Yang, Zhentao
Wang, Xiulan
Huang, Hui
Li, Yingrui
Li, Ruiqiang
Zhang, Xiuqing
Yang, Huanming
Wang, Jian
Wang, Jun
Title The YH database: the first Asian diploid genome database
Journal name Nucleic Acids Research   Check publisher's open access policy
ISSN 0305-1048
1362-4962
Publication date 2009
Sub-type Article (original research)
DOI 10.1093/nar/gkn966
Open Access Status DOI
Volume 37
Issue SUPPL. 1
Start page D1025
End page D1028
Total pages 4
Place of publication Oxford, United Kingdom
Publisher Oxford University Press
Language eng
Abstract The YH database is a server that allows the user to easily browse and download data from the first Asian diploid genome. The aim of this platform is to facilitate the study of this Asian genome and to enable improved organization and presentation large-scale personal genome data. Powered by GBrowse, we illustrate here the genome sequences, SNPs, and sequencing reads in the MapView. The relationships between phenotype and genotype can be searched by location, dbSNP ID, HGMD ID, gene symbol and disease name. A BLAST web service is also provided for the purpose of aligning query sequence against YH genome consensus. The YH database is currently one of the three personal genome database, organizing the original data and analysis results in a user-friendly interface, which is an endeavor to achieve fundamental goals for establishing personal medicine. The database is available at http://yh.genomics.org.
Keyword Diploid genome
Asian
YH database
Q-Index Code C1
Q-Index Status Provisional Code
Institutional Status Non-UQ

Document type: Journal Article
Sub-type: Article (original research)
Collection: School of Chemistry and Molecular Biosciences
 
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