Nemertean toxin genes revealed through transcriptome sequencing

Whelan, Nathan V., Kocot, Kevin M., Santos, Scott R. and Halanych, Kenneth M. (2014) Nemertean toxin genes revealed through transcriptome sequencing. Genome Biology and Evolution, 6 12: 3314-3325. doi:10.1093/gbe/evu258

Author Whelan, Nathan V.
Kocot, Kevin M.
Santos, Scott R.
Halanych, Kenneth M.
Title Nemertean toxin genes revealed through transcriptome sequencing
Journal name Genome Biology and Evolution   Check publisher's open access policy
ISSN 1759-6653
Publication date 2014-12
Year available 2014
Sub-type Article (original research)
DOI 10.1093/gbe/evu258
Open Access Status DOI
Volume 6
Issue 12
Start page 3314
End page 3325
Total pages 12
Place of publication Oxford, United Kingdom
Publisher Oxford University Press
Collection year 2015
Language eng
Abstract Nemerteans are one of few animal groups that have evolved the ability to utilize toxins for both defense and subduing prey, but little is known about specific nemertean toxins. In particular, no study has identified specific toxin genes even though peptide toxins are known from some nemertean species. Information about toxin genes is needed to better understand evolution of toxins across animals and possibly provide novel targets for pharmaceutical and industrial applications. We sequenced and annotated transcriptomes of two free-living and one commensal nemertean and annotated an additional six publicly available nemertean transcriptomes to identify putative toxin genes. Approximately 63–74% of predicted open reading frames in each transcriptome were annotated with gene names, and all species had similar percentages of transcripts annotated with each higher-level GO term. Every nemertean analyzed possessed genes with high sequence similarities to known animal toxins including those from stonefish, cephalopods, and sea anemones. One toxin-like gene found in all nemerteans analyzed had high sequence similarity to Plancitoxin-1, a DNase II hepatotoxin that may function well at low pH, which suggests that the acidic body walls of some nemerteans could work to enhance the efficacy of protein toxins. The highest number of toxin-like genes found in any one species was seven and the lowest was three. The diversity of toxin-like nemertean genes found here is greater than previously documented, and these animals are likely an ideal system for exploring toxin evolution and industrial applications of toxins.
Keyword Nemertea
Ribbon worm
Starfish Acanthaster planci
Anemone Phyllodiscus semoni
Cerebratulus lacteus
Lethal factor
Cdna cloning
RNA seq
Parborlasia corrugatus
Phylogenetic analysis
Nematocyst venom
Macpf domain
Q-Index Code C1
Q-Index Status Provisional Code
Institutional Status Non-UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Non HERDC
School of Biological Sciences Publications
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Created: Fri, 20 Feb 2015, 16:39:10 EST by Gail Walter on behalf of School of Biological Sciences