Supervised independent component analysis as an alternative method for genomic selection in pigs

Azevedo, C. F., Silva, F. F., de Resende M. D. V., Lopes. M. S., Duijvesteijn, N., Guimaraes, S. E. F., Lopes, P. S., Kelly, M. J., Viana, J. M. S. and Knol, E. F. (2014) Supervised independent component analysis as an alternative method for genomic selection in pigs. Journal of Animal Breeding and Genetics, 131 6: 452-461. doi:10.1111/jbg.12104


Author Azevedo, C. F.
Silva, F. F.
de Resende M. D. V.
Lopes. M. S.
Duijvesteijn, N.
Guimaraes, S. E. F.
Lopes, P. S.
Kelly, M. J.
Viana, J. M. S.
Knol, E. F.
Title Supervised independent component analysis as an alternative method for genomic selection in pigs
Journal name Journal of Animal Breeding and Genetics   Check publisher's open access policy
ISSN 0931-2668
1439-0388
Publication date 2014-12-01
Year available 2014
Sub-type Article (original research)
DOI 10.1111/jbg.12104
Volume 131
Issue 6
Start page 452
End page 461
Total pages 10
Place of publication Berlin, Germany
Publisher Wiley-Blackwell
Collection year 2015
Language eng
Abstract The objective of this work was to evaluate the efficiency of the supervised independent component regression (SICR) method for the estimation of genomic values and the SNP marker effects for boar taint and carcass traits in pigs. The methods were evaluated via the agreement between the predicted genetic values and the corrected phenotypes observed by cross-validation. These values were also compared with other methods generally used for the same purposes, such as RR-BLUP, SPCR, SPLS, ICR, PCR and PLS. The SICR method was found to have the most accurate prediction values.
Keyword Accuracy
Animal breeding
Genomic selection
SNP
Q-Index Code C1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Queensland Alliance for Agriculture and Food Innovation
Official 2015 Collection
 
Versions
Version Filter Type
Citation counts: TR Web of Science Citation Count  Cited 3 times in Thomson Reuters Web of Science Article | Citations
Scopus Citation Count Cited 4 times in Scopus Article | Citations
Google Scholar Search Google Scholar
Created: Tue, 21 Oct 2014, 11:12:43 EST by System User on behalf of Qld Alliance for Agriculture and Food Innovation