Access and use of the GUDMAP Database of genitourinary development

Davies, Jamie A., Little, Melissa H., Aronow, Bruce, Armstrong, Jane, Brennan, Jane, Lloyd-MacGilp, Sue, Armit, Chris, Harding, Simon, Piu, Xinjun, Roochun, Yogmatee, Haggarty, Bernard, Houghton, Derek, Davidson, Duncan and Baldock, Richard (2012). Access and use of the GUDMAP Database of genitourinary development. In Odysse Michos (Ed.), Kidney development: Methods and protocols (pp. 185-201) New York , NY, United States: Humana Press. doi:10.1007/978-1-61779-851-1_17

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Author Davies, Jamie A.
Little, Melissa H.
Aronow, Bruce
Armstrong, Jane
Brennan, Jane
Lloyd-MacGilp, Sue
Armit, Chris
Harding, Simon
Piu, Xinjun
Roochun, Yogmatee
Haggarty, Bernard
Houghton, Derek
Davidson, Duncan
Baldock, Richard
Title of chapter Access and use of the GUDMAP Database of genitourinary development
Title of book Kidney development: Methods and protocols
Place of Publication New York , NY, United States
Publisher Humana Press
Publication Year 2012
Sub-type Chapter in textbook
DOI 10.1007/978-1-61779-851-1_17
Series Methods in Molecular Biology
ISBN 9781617798511
1617798517
9781617798504
1617798509
Editor Odysse Michos
Volume number 886
Chapter number 17
Start page 185
End page 201
Total pages 17
Total chapters 35
Collection year 2013
Language eng
Formatted Abstract/Summary The Genitourinary Development Molecular Atlas Project (GUDMAP) aims to document gene expression across time and space in the developing urogenital system of the mouse, and to provide access to a variety of relevant practical and educational resources. Data come from microarray gene expression pro fi ling (from laser-dissected and FACS-sorted samples) and in situ hybridization at both low (whole-mount) and high (section) resolutions. Data are annotated to a published, high-resolution anatomical ontology and can be accessed using a variety of search interfaces. Here, we explain how to run typical queries on the database, by gene or anatomical location, how to view data, how to perform complex queries, and how to submit data.
Keyword Organogenesis
Development
Bioinformatics
Seminal vesicle
Mesonephros
Q-Index Code BX
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Book Chapter
Collections: Non HERDC
Institute for Molecular Bioscience - Publications
 
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Created: Thu, 23 Aug 2012, 09:46:47 EST by Susan Allen on behalf of Institute for Molecular Bioscience