Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))

Anderson, Iain, Goker, Markus, Nolan, Matt, Lucas, Susan, Hammon, Nancy, Deshpande, Shweta, Cheng, Jan-Fang, Tapia, Roxanne, Han, Cliff, Goodwin, Lynne, Pitluck, Sam, Huntemann, Marcel, Liolios, Konstantinos, Ivanova, Natalia, Pagani, Ioanna, Mavromatis, Konstantinos, Ovchinikova, Galina, Pati, Amrita, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Brambilla, Evelyne-Marie, Huber, Harald, Yasawong, Montri, Rohde, Manfred, Spring, Stefan, Abt, Birte, Sikorski, Johannes, Wirth, Reinhard, Detter, John C., Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C., Klenk, Hans-Peter and Lapidus, Alla (2011) Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T)). Standards in Genomic Sciences, 4 3: 381-392. doi:10.4056/sigs.2014648

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Author Anderson, Iain
Goker, Markus
Nolan, Matt
Lucas, Susan
Hammon, Nancy
Deshpande, Shweta
Cheng, Jan-Fang
Tapia, Roxanne
Han, Cliff
Goodwin, Lynne
Pitluck, Sam
Huntemann, Marcel
Liolios, Konstantinos
Ivanova, Natalia
Pagani, Ioanna
Mavromatis, Konstantinos
Ovchinikova, Galina
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Brambilla, Evelyne-Marie
Huber, Harald
Yasawong, Montri
Rohde, Manfred
Spring, Stefan
Abt, Birte
Sikorski, Johannes
Wirth, Reinhard
Detter, John C.
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Lapidus, Alla
Title Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))
Formatted title
Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A(T))
Journal name Standards in Genomic Sciences   Check publisher's open access policy
ISSN 1944-3277
Publication date 2011-01-01
Sub-type Article (original research)
DOI 10.4056/sigs.2014648
Open Access Status DOI
Volume 4
Issue 3
Start page 381
End page 392
Total pages 12
Place of publication East lansing, MI, United States
Publisher Michigan State University * Genomic Standards Consortium
Collection year 2012
Language eng
Formatted abstract
Pyrolobus fumarii Blöchl et al. 1997 is the type species of the genus Pyrolobus, which belongs to the crenarchaeal family Pyrodictiaceae. The species is a facultatively microaerophilic non-motile crenarchaeon. It is of interest because of its isolated phylogenetic location in the tree of life and because it is a hyperthermophilic chemolithoautotroph known as the primary producer of organic matter at deep-sea hydrothermal vents. P. fumarii exhibits currently the highest optimal growth temperature of all life forms on earth (106°C). This is the first completed genome sequence of a member of the genus Pyrolobus to be published and only the second genome sequence from a member of the family Pyrodictiaceae. Although Diversa Corporation announced the completion of sequencing of the P. fumarii genome on September 25, 2001, this sequence was never released to the public. The 1,843,267 bp long genome with its 1,986 protein-coding and 52 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keyword Hyperthermophile
Chemolithoautotroph
Facultative microaerophilic
Non-motile
Hydrothermal solfataric vents
Black smoker
Pyrodictiaceae
GEBA
Q-Index Code C1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Official 2012 Collection
Australian Centre for Ecogenomics
School of Chemistry and Molecular Biosciences
 
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