Role of bioinformatics as a tool for vegetable Brassica species

Duran, Chris, Boskovic, Zoran, Batley, Jacqueline and Edwards, David (2011). Role of bioinformatics as a tool for vegetable Brassica species. In Jan Sadowski and Chittaranjan Kole (Ed.), Genetics, genomics and breeding of vegetable Brassicas (pp. 406-418) Enfield, NH, United States: Science Publishers.

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Name Description MIMEType Size Downloads
Author Duran, Chris
Boskovic, Zoran
Batley, Jacqueline
Edwards, David
Title of chapter Role of bioinformatics as a tool for vegetable Brassica species
Formatted title
Role of bioinformatics as a tool for vegetable Brassica species
Title of book Genetics, genomics and breeding of vegetable Brassicas
Place of Publication Enfield, NH, United States
Publisher Science Publishers
Publication Year 2011
Sub-type Research book chapter (original research)
Series Genetics, Genomics and Breeding of Crop Plants
ISBN 9781578087068
Editor Jan Sadowski
Chittaranjan Kole
Chapter number 11
Start page 406
End page 418
Total pages 13
Total chapters 11
Collection year 2012
Language eng
Formatted Abstract/Summary
With the rapidly increasing volumes and complexity of genetic and
genomic data available for Brassica crops, there is an increasing
need for bioinformatics tools to analyze and organize this data.
This chapter reviews a selection of tools and databases available for
Brassica bioinformatics, describing their purpose and utility for Brassica
researchers. The majority of Brassica · bioinformatics tools have been
developed for the discovery and analysis of molecular genetic markers.
These include autoSNPdb, SSRPrimer CMAP3D and Brassica.info.
With the growth of gene and genome sequence data, as well as gene
expression and phenotypic information, there will be an increasing
requirement to integrate and merge this information using current and
future bioinformatics applications.
Keyword AutoSNPdb
SRRPrimer
CMap
ENsEMBL
Brassica.info
Q-Index Code BX
Q-Index Status Confirmed Code
Institutional Status UQ

 
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Created: Sat, 15 Oct 2011, 19:14:35 EST by Dr Dave Edwards on behalf of Qld Alliance for Agriculture and Food Innovation