Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))

Pukall, Rüdiger, Zeytun, Ahmet, Lucas, Susan, Lapidus, Alla, Hammon, Nancy, Deshpande, Shweta, Nolan, Matt, Cheng, Jan-Fang, Pitluck, Sam, Liolios, Konstantinos, Pagani, Ioanna, Mikhailova, Natalia, Ivanova, Natalia, Mavromatis, Konstantinos, Pati, Amrita, Tapia, Roxane, Han, Cliff, Goodwin, Lynne, Chen, Amy, Palaniappan, Krishna, Land, Miriam, Hauser, Loren, Chang, Yun-Juan, Jeffries, Cynthia D., Brambilla, Evelyne-Marie, Rohde, Manfred, Göker, Markus, Detter, J. Chris, Woyke, Tanja, Bristow, James, Eisen, Jonathan A., Markowitz, Victor, Hugenholtz, Philip, Kyrpides, Nikos C. and Klenk, Hans-Peter (2011) Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T)). Standards in Genomic Sciences, 4 2: 163-172. doi:10.4056/sigs.1633949

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Author Pukall, Rüdiger
Zeytun, Ahmet
Lucas, Susan
Lapidus, Alla
Hammon, Nancy
Deshpande, Shweta
Nolan, Matt
Cheng, Jan-Fang
Pitluck, Sam
Liolios, Konstantinos
Pagani, Ioanna
Mikhailova, Natalia
Ivanova, Natalia
Mavromatis, Konstantinos
Pati, Amrita
Tapia, Roxane
Han, Cliff
Goodwin, Lynne
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Hauser, Loren
Chang, Yun-Juan
Jeffries, Cynthia D.
Brambilla, Evelyne-Marie
Rohde, Manfred
Göker, Markus
Detter, J. Chris
Woyke, Tanja
Bristow, James
Eisen, Jonathan A.
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C.
Klenk, Hans-Peter
Title Complete genome sequence of Deinococcus maricopensis type strain (LB-34(T))
Formatted title
Complete genome sequence of Deinococcus maricopensis type strain (LB-34T)
Journal name Standards in Genomic Sciences   Check publisher's open access policy
ISSN 1944-3277
Publication date 2011-04-29
Sub-type Article (original research)
DOI 10.4056/sigs.1633949
Open Access Status DOI
Volume 4
Issue 2
Start page 163
End page 172
Total pages 10
Place of publication East Lansing, MI, U.S.A.
Publisher Genomic Standards Consortium, Michigan State University
Collection year 2012
Language eng
Formatted abstract
Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococcus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum DeinococcusThermus. Strain LB-34T was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geothermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these species adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. maricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Keyword Aerobic
Non-motile
Gram-positive
Radiation-resistant
Mesophilic
Chemoorganotrophic
Deinococcaceae
GEBA
Radiation-resistant bacterium
Sp-nov
Genus deinococcus
Radioactive site
Desert soil
Sp. nov.
Archaea
Geothermalis
Radiodurans
Diversity
Q-Index Code C1
Q-Index Status Confirmed Code
Institutional Status UQ

Document type: Journal Article
Sub-type: Article (original research)
Collections: Official 2012 Collection
School of Chemistry and Molecular Biosciences
 
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