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MammoSapiens: eResearch of the lactation program. Building online facilities for collaborative molecular and evolutionary analysis of lactation and other biological systems from gene sequences and gene expression data.
Kevin R Nicholas, Amit Kumar, Yvan Strahm, David Powell, Torsten Seemann, Kerry A. Daly, Amelia Brennan, Karensa Menzies, Julie Sharp, Matthew Digby and Christophe Lefèvre (2008). MammoSapiens: eResearch of the lactation program. Building online facilities for collaborative molecular and evolutionary analysis of lactation and other biological systems from gene sequences and gene expression data.. In: , Proceedings of eResearch Australasia 2008. eResearch Australasia 2008, Melbourne, Australia, (). 28 September - 3 October 2008.
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| Attached Files (Some files may be inaccessible until you login with your UQ eSpace credentials) |
| Name |
Description |
MIMEType |
Size |
Downloads |
era08_submission_36.pdf
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Conference paper |
application/pdf |
275.03KB |
75 |
| Author(s) |
Kevin R Nicholas
Amit Kumar
Yvan Strahm
David Powell
Torsten Seemann
Kerry A. Daly
Amelia Brennan
Karensa Menzies
Julie Sharp
Matthew Digby
Christophe Lefèvre
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| Title of paper |
MammoSapiens: eResearch of the lactation program. Building online facilities for collaborative molecular and evolutionary analysis of lactation and other biological systems from gene sequences and gene expression data.
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| Conference name |
eResearch Australasia 2008
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| Conference location |
Melbourne, Australia
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| Conference dates |
28 September - 3 October 2008
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| Convener |
Australian Department of Innovation, Industry, Science and Research
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| Proceedings title |
Proceedings of eResearch Australasia 2008
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| Publication date |
2008
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| Abstract/Summary |
Delivering bioinformatics power to life science researchers inevitably runs into problems of limited computing resources in the context of exponentially increasing data sources, access time, costs, lack of skills and, rapidly evolving technology and software tools with poorly defined standards. In this context the development of online facilities to best enable collaborative research often needs to be customized to specific project applications in close cooperation with the experimentalist users and, to be concerned with the storage and management of results to allow more consistency and traceability of results on a broad access data mining platform. Here we showcase an Internet based research platform using the PHP/MySQL paradigm for the collaborative, integrative and comparative analysis of lactation related gene sequences and gene expression experiments to support lactation research. We also illustrate how these resources are used, how they enable research by allowing meta-analysis of data and results and, how the bottom-up development of customized eResearch components can lead to the production of more generic functional software tools and eResearch environments for deployment to a larger number of biological researchers working on other bio-systems.
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| Subjects |
280000 Information, Computing and Communication Sciences
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