Simulation of gel phase formation and melting in lipid bilayers using a coarse grained model

Marrink, S. J., Risselada, J. and Mark, A. E. (2005) Simulation of gel phase formation and melting in lipid bilayers using a coarse grained model. Chemistry And Physics of Lipids, 135 2: 223-244. doi:10.1016/j.chemphyslip.2005.03.001

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Author Marrink, S. J.
Risselada, J.
Mark, A. E.
Title Simulation of gel phase formation and melting in lipid bilayers using a coarse grained model
Journal name Chemistry And Physics of Lipids   Check publisher's open access policy
ISSN 0009-3084
Publication date 2005
Sub-type Article (original research)
DOI 10.1016/j.chemphyslip.2005.03.001
Volume 135
Issue 2
Start page 223
End page 244
Total pages 22
Place of publication Clare
Publisher Elsevier Ireland Ltd
Language eng
Abstract The transformation between a gel and a fluid phase in dipalmitoyl-phosphatidylcholine (DPPC) bilayers has been simulated using a coarse grained (CG) model by cooling bilayer patches composed of up to 8000 lipids. The critical step in the transformation process is the nucleation of a gel cluster consisting of 20-80 lipids, spanning both monolayers. After the formation of the critical cluster, a fast growth regime is entered. Growth slows when multiple gel domains start interacting, forming a percolating network. Long-lived fluid domains remain trapped and can be metastable on a microsecond time scale. From the temperature dependence of the rate of cluster growth, the line tension of the fluid-gel interface was estimated to be 3 +/- 2 pN. The reverse process is observed when heating the gel phase. No evidence is found for a hexatic phase as an intermediate stage of melting. The hysteresis observed in the freezing and melting transformation is found to depend both on the system size and on the time scale of the simulation. Extrapolating to macroscopic length and time scales, the transition temperature for heating and cooling converges to 295 +/- 5 K, in semi-quantitative agreement with the experimental value for DPPC (315 K). The phase transformation is associated with a drop in lateral mobility of the lipids by two orders of magnitude, and an increase in the rotational correlation time of the same order of magnitude. The lipid headgroups, however, remain fluid. These observations are in agreement with experimental findings, and show that the nature of the ordered phase obtained with the CG model is indeed a gel rather than a crystalline phase. Simulations performed at different levels of hydration furthermore show that the gel phase is stabilized at low hydration. A simulation of a small DPPC vesicle reveals that curvature has the opposite effect. (c) 2005 Elsevier Ireland Ltd. All rights reserved.
Keyword Biochemistry & Molecular Biology
main phase transition
molecular dynamics
nucleation and growth
heterophase fluctuations
hexatic phase
Lateral Diffusion
Q-Index Code C1

Document type: Journal Article
Sub-type: Article (original research)
Collections: Excellence in Research Australia (ERA) - Collection
School of Chemistry and Molecular Biosciences
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Citation counts: TR Web of Science Citation Count  Cited 182 times in Thomson Reuters Web of Science Article | Citations
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Created: Wed, 19 Sep 2007, 17:36:36 EST