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Dalton-Morgan, Jessica, Hayward, Alice, Alamery, Salman, Tollenaere, Reece, Mason, Annaliese S., Campbell, Emma, Patel, Dhwani, Lorenc, Michał T., Yi, Bin, Long, Yan, Meng, Jinling, Raman, Rosy, Raman, Harsh, Lawley, Cindy, Edwards, David and Batley, Jacqueline (2014) A high-throughput SNP array in the amphidiploid species Brassica napus shows diversity in resistance genes. Functional and Integrative Genomics, 14 4: 643-655. doi:10.1007/s10142-014-0391-2 31   1 Cited 0 times in Scopus0 2
Xia, Wei, Mason, Annaliese S., Xiao, Yong, Liu, Zheng, Yang, Yaodong, Lei, Xintao, Wu, Xiaoming, Ma, Zilong and Peng, Ming (2014) Analysis of multiple transcriptomes of the African oil palm (Elaeis guineensis) to identify reference genes for RT-qPCR. Journal of Biotechnology, 184 63-73. doi:10.1016/j.jbiotec.2014.05.008 28   1 Cited 1 times in Scopus1 1
Mason, Annaliese S., Yan, Guijun, Cowling, Wallace A. and Nelson, Matthew N. (2012) A new method for producing allohexaploid Brassica through unreduced gametes. Euphytica, 186 2: 277-287. doi:10.1007/s10681-011-0537-4 64   3 Cited 4 times in Scopus4 0
Mason, Annaliese S. (2015). Challenges of genotyping polyploid species. In Jacqueline Batley (Ed.), Plant genotyping: methods and protocols (pp. 161-168) New York, NY, United States: Springer Science and Business Publishing. doi:10.1007/978-1-4939-1966-6_12 20   0
Ma, Bi, Wei, Lijuan, Mason, Annaliese S., An, Zeshan, Xiao, Meili, Banga, S.S., Zhang, Junjun, Zhou, Qinghong and Fu, Donghui (2013) Characterization and comparison of key genes involved with flowering time regulation from Arabidopsis thaliana, Oryza sativa, and Zea mays. African Journal of Biotechnology, 12 4: 353-363. doi:10.5897/AJB12.1778 71   0
Wei, Lijuan, Xiao, Meili, Mason, Annaliese S., Ma, Bi, Lu, Kun, Li, Jiana, Katrin, Link and Fu, Donghui (2013) Characterization and evolutionary analysis of Brassica species-diverged sequences containing simple repeat units. Genes and Genomics, 35 2: 167-175. doi:10.1007/s13258-013-0076-6 31 1 1 Cited 1 times in Scopus1 0
Liu, Honglei, Yin, Jiaming, Xiao, Meili, Gao, Caihua, Mason, Annaliese S., Zhao, Zunkang, Liu, Yingchun, Li, Jiana and Fu, Donghui (2012) Characterization and evolution of 5′ and 3′ untranslated regions in eukaryotes. Gene, 507 2: 106-111. doi:10.1016/j.gene.2012.07.034 98   2 Cited 3 times in Scopus3 0
Xiao, Yong, Xia, Wei, Yang, Yaodong, Mason, Annaliese S., Lei, Xintao and Ma, Zilong (2013) Characterization and Evolution of Conserved MicroRNA through Duplication Events in Date Palm (Phoenix dactylifera). PLoS ONE, 8 8: e71435.1-e71435.9. doi:10.1371/journal.pone.0071435 29   1 Cited 2 times in Scopus2 1
Liu, Yingchun, Yin, Jiaming, Xiao, Meili, Mason, Annaliese S., Gao, Caihua, Liu, Honglei, Li, Jiana and Fu, Donghui (2013) Characterization of structure, divergence and regulation patterns of plant promoters. Journal of Molecular Biology Research, 3 1: 23-36. doi:10.5539/jmbr.v3n1p23 33   0
Zou, Jun, Fu, Donghui, Gong, Huihui, Qian, Wei, Xia, Wei, Pires, J. Chris, Li, RuiYuan, Long, Yan, Mason, Annaliese S., Yang, Tae-Jin, Lim, Yong P., Park, Beom S. and Meng, Jinling (2011) De novo genetic variation associated with retrotransposon activation, genomic rearrangements and trait variation in a recombinant inbred line population of Brassica napus derived from interspecific hybridization with Brassica rapa. The Plant Journal, 68 2: 212-224. doi:10.1111/j.1365-313X.2011.04679.x 70   18 Cited 21 times in Scopus21 0
Xia, Wei, Xiao, Yong, Liu, Zheng, Luo, Yi, Mason, Annaliese S., Fan, Haikuo, Yang, Yaodong, Zhao, Songlin and Peng, Ming (2014) Development of gene-based simple sequence repeat markers for association analysis in Cocos nucifera. Molecular Breeding, 34 2: 525-535. doi:development 19   Cited 0 times in Scopus0 0
Xiao, Yong, Luo, Yi, Yang, Yaodong, Fan, Haikuo, Xia, Wei, Mason, Annaliese S., Zhao, Songlin, Sager, Ross and Qiao, Fei (2013) Development of microsatellite markers in Cocos nucifera and their application in evaluating the level of genetic diversity of Cocos nucifera. Plant Omics journal, 6 3: 193-200. 69   2 Cited 1 times in Scopus1
Geng, X. X., Chen, S., Astarini, I. A., Yan, G. J., Tian, E., Meng, J., Li, Z. Y., Ge, X. H, Nelson, M. N., Mason, A. S., Pradhan, A., Zhou, W. J. and Cowling, W. A. (2013) Doubled haploids of novel trigenomic Brassica derived from various interspecific crosses. Plant Cell, Tissue and Organ Culture, 113 3: 501-511. doi:10.1007/s11240-013-0292-4 38   5 Cited 3 times in Scopus3 0
Xiao, Yong, Yang, Yaodong, Cao, Hongxing, Fan, Haikuo, Ma, Zilong, Lei, Xintao, Mason, Annaliese S., Xia, Zhihui and Huang, Xi (2012) Efficient isolation of high quality RNA from tropical palms for RNA-seq analysis. Plant Omics, 5 6: 584-589. 69 2 5 Cited 5 times in Scopus5
Xiao, Yong, Zhou, Lixia, Xia, Wei, Mason, Annaliese S., Yang, Yaodong, Ma, Zilong and Peng, Ming (2014) Exploiting transcriptome data for the development and characterization of gene-based SSR markers related to cold tolerance in oil palm (Elaeis guineensis). BMC Plant Biology, 14 384.1-384.13. doi:10.1186/s12870-014-0384-2 32   1 0
Wei, Lijuan, An, Zeshan, Mason, Annaliese S., Xiao, Meili, Chen, Fuyou, Guo, Ying, Li, Jiana and Fu, Donghui (2014) Extensive tRNA gene changes in synthetic Brassica napus. Journal of Molecular Evolution, 78 1: 38-49. doi:10.1007/s00239-013-9598-4 27 10 0 Cited 0 times in Scopus0 0
Mason, Annaliese S., Huteau, Virginie, Eber, Frédérique, Coriton, Olivier, Yan, Guijun, Nelson, Matthew N., Cowling, Wallace A. and Chèvre, Anne-Marie (2010) Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC and CCAB Brassica interspecific hybrids. Chromosome Research, 18 6: 655-666. doi:10.1007/s10577-010-9140-0 38   23 Cited 23 times in Scopus23 0
Mason, Annaliese S., Nelson, Matthew N., Castello, Marie-Claire, Yan, Guijun and Cowling, Wallace A. (2011) Genotypic effects on the frequency of homoeologous and homologous recombination in Brassica napus x B. carinata hybrids. Theoretical and Applied Genetics, 122 3: 543-553. doi:10.1007/s00122-010-1468-5 23   12 Cited 14 times in Scopus14 0
Mason, Annaliese S., Batley, Jacqueline, Bayer, Philipp Emanuel, Hayward, Alice, Cowling, Wallace A. and Nelson, Matthew N. (2014) High-resolution molecular karyotyping uncovers pairing between ancestrally related Brassica chromosomes. New Phytologist, 202 3: 964-974. doi:10.1111/nph.12706 28   1 Cited 2 times in Scopus2 2
Gao, Caihua, Ren, Xiaodong, Mason, Annaliese S., Liu, Honglei, Xiao, Meil, Li, Jiana and Fu, Donghui (2014) Horizontal gene transfer in plants. Functional and Integrative Genomics, 14 1: 23-29. doi:10.1007/s10142-013-0345-0 39 24 1 Cited 2 times in Scopus2 1
Huang, Shunmou, Deng, Linbin, Guan, Mei, Li, Jiana, Lu, Kun, Wang, Hanzhong, Fu, Donghui, Mason, Annaliese S., Liu, Shengyi and Hua, Wei (2013) Identification of genome-wide single nucleotide polymorphisms in allopolyploid crop Brassica napus. BMC Genomics, 14 717: 1-21. doi:10.1186/1471-2164-14-717 22   6 Cited 5 times in Scopus5 6
Zhou, Qing-Hong, Fu, • Dong-Hui, Mason, Annaliese S., Zeng, Yong-Jun, Zhao, Chao-Xian and Huang, Ying-Jin (2014) In silico integration of quantitative trait loci for seed yield and yield-related traits in Brassica napus. Molecular Breeding, 33 4: 881-894. doi:10.1007/s11032-013-0002-2 35   1 Cited 1 times in Scopus1 0
Fu, Donghui, Ma, Bi, Mason, Annaliese S., Xiao, Meili, Wei, Lijuan and An, Zeshan (2013) MicroRNA-based molecular markers: a novel PCR-based genotyping technique in Brassica species. Plant Breeding, 132 4: 375-381. doi:10.1111/pbr.12069 37   1 Cited 1 times in Scopus1 0
Nelson, Matthew N., Mason, Annaliese S., Castello, Marie-Claire, Thomson, Linda, Yan, Guijun and Cowling, Wallace A. (2009) Microspore culture preferentially selects unreduced (2n) gametes from an interspecific hybrid of Brassica napus L. × Brassica carinata Braun. Theoretical and Applied Genetics, 119 3: 497-505. doi:10.1007/s00122-009-1056-8 28   27 Cited 29 times in Scopus29 0
Mason, Annaliese S. (2013). Molecular cytogenetics. In Biotechnology of Crucifers (pp. 13-22) New York, United States: Springer. doi:10.1007/978-1-4614-7795-2_2 28   0
Wei, Lijuan, Xiao, Meili, An, Zeshan, Ma, Bi, Mason, Annaliese S., Qian, Wei, Li, Jiana and Fu, Donghui (2013) New insights into nested long terminal repeat retrotransposons in Brassica species. Molecular Plant, 6 2: 470-482. doi:10.1093/mp/sss081 44   3 Cited 4 times in Scopus4 1
Mason, Annaliese S., Nelson, Matthew N., Yan, Guijin and Cowling, Wallace A. (2011) Production of viable male unreduced gametes in Brassica interspecific hybrids is genotype specific and stimulated by cold temperatures. BMC Plant Biology, 11 103.1-103.13. doi:10.1186/1471-2229-11-103 33   18 Cited 21 times in Scopus21 0
Yan, G., Nelson, M. N., Pradhan, A., Mason, A. S., Weerakoon, S. R., Si, P., Plummer, J. and Cowling, W. A. (2009) Progress towards the creation of trigenomic Brassica hexaploid populations. SABRAO Journal of Breeding and Genetics, 41 Special Supplement 00274: . 39  
Gao, Caihua, Yin, Jiaming, Mason, Annaliese S., Tang, Zhanglin, Ren, Xiaodong, Li, Chao, An, Zeshan, Fu, Donghui and Li, Jiana (2014) Regularities in simple sequence repeat variations induced by a cross of resynthesized Brassica napus and natural Brassica napus. Plant OMICS, 7 1: 35-46. 46 6 Cited 0 times in Scopus0
Gao, Caihua, Ren, Xiaodong, Mason, Annaliese S., Li, Jiana, Wang, Wei, Xiao, Meili and Fu, Donghui (2013) Revisiting an important component of plant genomes: microsatellites. Functional Plant Biology, 40 7: 645-661. doi:10.1071/FP12325 111   0 Cited 0 times in Scopus0 0
Fan, Haikuo, Xiao, Yong, Yang, Yaodong, Xia, Wei, Mason, Annaliese S., Xia, Zhihui, Qiao, Fei, Zhao, Songlin and Tang, Haoru (2013) RNA-Seq Analysis of Cocos nucifera: Transcriptome Sequencing and De Novo for Subsequent Functional Genomics Approaches. PLoS One, 8 3: e59997.1-e59997.10. doi:10.1371/journal.pone.0059997 25   12 Cited 10 times in Scopus10 1
Lei, Xintao, Xiao, Yong, Xia, Wei, Mason, Annaliese S., Yang, Yaodong, Ma, Zilong and Peng, Ming (2014) RNA-seq analysis of oil palm under cold stress reveals a different C-repeat binding factor (CBF) mediated gene expression pattern in Elaeis guineensis compared to other species. PLoS ONE, 9 12: . doi:10.1371/journal.pone.0114482 16   1 Cited 1 times in Scopus1 3
Xia, Wei, Liu, Zheng, Yang, Yaodong, Xiao, Yong, Mason, Annaliese S., Zhao, Songlin and Ma, Zilong (2014) Selection of reference genes for quantitative real-time PCR in Cocos nucifera during abiotic stress. Botany, 92 3: 179-186. doi:10.1139/cjb-2013-0212 30   1 Cited 1 times in Scopus1 1
Lai, Kaitao, Duran, Chris, Berkman, Paul J., Lorenc, Michał T., Stiller, Jiri, Manoli, Sahana, Hayden, Matthew J., Forrest, Kerrie L., Fleury, Delphine, Baumann, Ute, Zander, Manuel, Mason, Annaliese S., Batley, Jacqueline and Edwards, David (2012) Single nucleotide polymorphism discovery from wheat next-generation sequence data. Plant Biotechnology Journal, 10 6: 743-749. doi:10.1111/j.1467-7652.2012.00718.x 101   33 Cited 41 times in Scopus41 0
Hayward, Alice, Mason, Annaliese S., Dalton-Morgan, Jessica, Zander, Manuel, Edwards, David and Batley, Jacqueline (2012) SNP discovery and applications in Brassica napus. Journal of Plant Biotechnology, 39 1: 49-61. doi:10.5010/JPB.2012.39.1.049 312 4 Cited 13 times in Scopus13 0
Mason, Annaliese S. (2015). SSR genotyping. In Jacqueline Batley (Ed.), Plant genotyping: methods and protocols (pp. 77-89) New York, NY, United States: Springer Science and Business Publishing. doi:10.1007/978-1-4939-1966-6_6 23   0
Mason, Annaliese S., Nelson, Matthew N., Takahira, Junko, Cowling, Wallace A., Moreira Alves, Gustavo, Chaudhuri, Arkaprava, Chen, Ning, Ragu, Mohana E., Dalton-Morgan, Jessica, Coriton, Olivier, Huteau, Virginie, Eber, Frédérique, Chèvre, Anne-Marie and Batley, Jacqueline (2014) The fate of chromosomes and alleles in an allohexaploid Brassica population. Genetics, 197 1: 273-283. doi:10.1534/genetics.113.159574 41   0 Cited 1 times in Scopus1 4
Parkin, Isobel A. P., Koh, Chushin, Tang, Haibao, Robinson, Stephen J., Kagale, Sateesh, Clarke, Wayne E., Town, Chris D., Nixon, John, Krishnakumar, Vivek, Bidwell, Shelby L., Denoeud, France, Belcram, Harry, Links, Matthew G., Just, Jérémy, Clarke, Carling, Bender, Tricia, Huebert, Terry, Mason, Annaliese S., Pires, Chris J., Barker, Guy, Moore, Jonathan, Walley, Peter G., Manoli, Sahana, Batley, Jacqueline, Edwards, Dave, Nelson, Matthew N., Wang, Xiyin, Paterson, Andrew H., King, Graham, Bancroft, Ian, Chalhoub, Boulos and Sharpe, Andrew G. (2014) Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea. Genome Biology, 15 6: R77.1-R77.35. doi:10.1186/gb-2014-15-6-r77 49   6 Cited 7 times in Scopus7 5
An, Z., Tang, Z., Ma, B., Mason, A. S., Guo, Y., Yin, J., Gao, C., Wei, L., Li, J. and Fu, D. (2014) Transposon variation by order during allopolyploidisation between Brassica oleracea and Brassica rapa. Plant Biology, 16 4: 825-835. doi:10.1111/plb.12121 16   1 Cited 1 times in Scopus1 1
Chen, Sheng, Nelson, Matthew N., Chèvre, Anne-Marie, Jenczewski, Eric, Li, Zaiyun, Mason, Annaliese S., Meng, Jinling, Plummer, Julie A., Pradhan, Aneeta, Siddique, Kadambot H. M., Snowdon, Rod J., Yan, Guijun, Zhou, Weijun and Cowling, Wallace A. (2011) Trigenomic bridges for Brassica improvement. Critical Reviews In Plant Sciences, 30 6: 525-547. doi:10.1080/07352689.2011.615700 65   12 Cited 13 times in Scopus13 3