Browse by all authors Browse By Author ID - Song, Sarah

Browse Results (26 results found)

Subscribe to the RSS feed for this result setSubscribe to the RSS feed for this result set

Refine

  Abstract Views File Downloads Thomson Reuters Web of Science Citation Count Scopus Citation Count Altmetric Score
Peters, Amelia A., Simpson, Peter T., Bassett, Johnathon J., Lee, Jane M., Da Silva, Leonard, Reid, Lynne E., Song, Sarah, Parat, Marie-Odile, Lakhani, Sunil R., Kenny, Paraic A., Roberts-Thomson, Sarah J. and Monteith, Gregory R. (2012) Calcium channel TRPV6 as a potential therapeutic target in estrogen receptor negative breast cancer. Molecular Cancer Therapeutics, 11 10: 2158-2168. doi:10.1158/1535-7163.MCT-11-0965 109   10 Cited 7 times in Scopus7 4
Srihari, Sriganesh, Madhamshettiwar, Piyush B., Song, Sarah, Liu, Chao, Simpson, Peter T., Khanna, Kumkum and Ragan, Mark A. (2014) Complex-based analysis of dysregulated cellular processes in cancer. BMC Systems Biology, 8 Supplement 4: . doi:10.1186/1752-0509-8-S4-S1 13   1 1
Naot, Dorit, Bava, Usha, Matthews, Brya, Callon, Karen E, Gamble, Gamble D, Black, Michael, Song, Sarah, Pitto, Rocco P, Cundy, Tim, Cornish, Jill and Reid, Ian R (2006) Differential gene expression in cultured osteoblasts and bone marrow stromal cells from patients with PagetĂ­s disease of bone. Journal of Bone and Mineral Research, 22 2: 298-309. doi:10.1359/JBMR.061108 69   44 Cited 53 times in Scopus53 0
Song, Sarah (2004). Empirical Bayes gene detection in Microarray analysis. The University of Auckland. 98 146
Hosein, Abdel Nasser, Song, Sarah, McCart Reed, Amy E., Jayanthan, Janani, Reid, Lynne E., Kutasovic, Jamie R., Cummings, Margaret C., Waddell, Nic, Lakhani, Sunil R., Chenevix-Trench, Georgia and Simpson, Peter T. (2013) Evaluating the repair of DNA derived from formalin-fixed paraffin-embedded tissues prior to genomic profiling by SNP-CGH analysis. Laboratory Investigation, 93 6: 701-710. doi:10.1038/labinvest.2013.54 52   7 Cited 8 times in Scopus8 1
Smart, Chanel E., Askarian Amiri, Marjan E., Wronski, Ania, Dinger, Marcel E., Crawford, Joanna, Ovchinnikov, Dmitry A., Vargas, Ana Cristina, Reid, Lynne, Simpson, Peter T., Song, Sarah, Wiesner, Christiane, French, Juliet D., Dave, Richa K., da Silva, Leonard, Purdon, Amy, Andrew, Megan, Mattick, John S., Lakhani, Sunil R., Brown, Melissa A. and Kellie, Stuart (2012) Expression and function of the protein tyrosine phosphatase receptor J (PTPRJ) in normal mammary epithelial cells and breast tumors. PLoS One, 7 7: e40742.1-e40742.13. doi:10.1371/journal.pone.0040742 142   1 Cited 2 times in Scopus2 0
Vargas, Ana Cristina, McCart Reed, Amy E., Waddell, Nic, Lane, Annette, Reid, Lynne E., Smart, Chanel E., Cocciardi, Sibylle, da Silva, Leonard, Song, Sarah, Chenevix-Trench, Georgia, Simpson Peter T. and Lakhani, Sunil R. (2012) Gene expression profiling of tumour epithelial and stromal compartments during breast cancer progression. Breast Cancer Research and Treatment, 135 1: 153-165. doi:10.1007/s10549-012-2123-4 107 49 15 Cited 14 times in Scopus14 0
Nones, Katia, Waddell, Nic, Song, Sarah, Patch, Ann-Marie, Miller, David, Johns, Amber, Wu, Jianmin, Kassahn, Karin S., Wood, David, Bailey, Peter, Fink, Lynn, Manning, Suzanne, Christ, Angelika N., Nourse, Craig, Kazakoff, Stephen, Taylor, Darrin, Leonard, Conrad, Chang, David K., Jones, Marc D., Thomas, Michelle, Watson, Clare, Pinese, Mark, Cowley, Mark, Rooman, Ilse, Pajic, Marina, Butturini, Giovanni, Malpaga, Anna, Corbo, Vincenzo, Crippa, Stefano, Falconi, Massimo, Zamboni, Guiseppe, Castelli, Paola, APGI, Lawlor, Rita T., Gill, Anthony J., Scarpa, Aldo, Pearson, John V., Biankin, Andrew V. and Grimmond, Sean M. (2014) Genome-wide DNA methylation patterns in pancreatic ductal adenocarcinoma reveal epigenetic deregulation of SLIT-ROBO, ITGA2 and MET signaling. International Journal of Cancer, 2014 5: 1110-1118. doi:10.1002/ijc.28765 50   1 3
Al-Ejeh, Fares, Miranda, Mariska, Shi,Wei, Simpson, Peter T., Song, Sarah, Vargas, Ana Cristina, Saunus, Jodi M., Smart, Chanel E., Mariasegaram, Mythily, Wiegmans, Adrian P., Chenevix-Trench, Georgia, Lakhani, Sunil R. and Khanna, Kum Kum (2014) Kinome profiling reveals breast cancer heterogeneity and identifies targeted therapeutic opportunities for triple negative breast cancer. Oncotarget, 5 10: 3145-3158. 24 6 0 Cited 0 times in Scopus0
Cummings, Margaret C., Simpson, Peter T., Reid, Lynne E., Jayanthan, Janani, Skerman, Joanna, Song, Sarah, McCart Reed, Amy E., Kutasovic, Jamie R., Morey, Adrienne L., Marquart, Louise, O'Rourke, Peter and Lakhani, Sunil R. (2014) Metastatic progression of breast cancer: Insights from 50 years of autopsies. Journal of Pathology, 232 1: 23-31. doi:10.1002/path.4288 49   3 Cited 7 times in Scopus7 6
Song, Sarah and Black, Michael A (2008) Microarray-based gene set analysis: a comparison of current methods. BMC Bioniformatics, 9 502. doi:10.1186/1471-2105-9-502 82   43 Cited 48 times in Scopus48 0
Dr Sarah Song (2008). Microarray-based gene set analysis in cancer studies PhD Thesis, Department of Statistics, The University of Auckland. 187  
Nasri, Soroush, Anjomshoaa, Ahmad, Song, Sarah, Guilford, Parry, McNoe, Les, Black, Michael, Phillips, Vicky, Reeve, Anthony and Humar, Bostjan (2010) Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples. Cancer Genetics and Cytogenetics, 198 1: 1-6. doi:10.1016/j.cancergencyto.2009.12.002 104   4 Cited 4 times in Scopus4 0
Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Gingras, Marie-Claude, Muthuswamy, Lakshmi B., Johns, Amber L., Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Wu, Jianmin, Chang, David K., Cowley, Mark J., Gardiner, Brooke B., Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Pajic, Marina, Scarlett, Christopher J., Gill, Anthony J., Pinho, Andreia V., Rooman, Ilse, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Christina, Nones, Katia, Fink, J. Lynn, Christ, Angelika, Bruxner, Tim, Cloonan, Nicole, Kolle, Gabriel, Newell, Felicity, Pinese, Mark, Mead, R. Scott, Humphris, Jeremy L., Kaplan, Warren, Jones, Marc D., Colvin, Emily K., Nagrial, Adnan M., Humphrey, Emily S., Chou, Angela, Chin, Venessa T., Chantrill, Lorraine A., Mawson, Amanda, Samra, Jaswinder S., Kench, James G., Lovell, Jessica A., Daly, Roger J., Merrett, Neil D., Toon, Christopher, Epari, Krishna, Nguyen, Nam Q., Barbour, Andrew, Zeps, Nikolajs, Australian Pancreatic Cancer Genome Initiative, Pearson, John V. and Grimmond, Sean M. (2012) Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature, 491 7424: 399-405. doi:10.1038/nature11547 198   207 Cited 202 times in Scopus202 100
Song, Sarah and Black, Michael (2007). PCOT2: Principal Coordinates and Hotelling’s T^2 for the analysis of microarray data. , . 75  
Boyde, Mary, Song, Sarah, Peters, Robyn, Turner, Catherine, Thompson, David R. and Stewart, Simon (2013) Pilot testing of a self-care education intervention for patients with heart failure. European Journal of Cardiovascular Nursing, 12 1: 39-46. doi:10.1177/1474515111430881 97   5 Cited 7 times in Scopus7 4
Song, Sarah, Nones, Katia, Miller, David, Harliwong, Ivon, Kassahn, Karin S., Pinese, Mark, Pajic, Marina, Gill, Anthony J., Johns, Amber L., Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Qinying, Newell, Felicity, Cowley, Mark J., Wu, Jianmin, Wilson, Peter, Fink, Lynn, Biankin, Andrew V., Waddell, Nic, Grimmond, Sean M. and Pearson, John V. (2012) qpure: a tool to estimate tumor cellularity from genome-wide single-nucleotide polymorphism profiles. PLoS One, 7 9: e45835.1-e45835.7. doi:10.1371/journal.pone.0045835 106   15 Cited 14 times in Scopus14 2
Anjomshoaa, Ahmad, Lin, YH, Black, Michael A, McCall, Les, Humar, Bostjan, Song, Sarah, Fukuzawa, Ryuji, Yoon, HS, Holzmann, B and Friederichs, J (2008) Reduced expression of a gene proliferation signature is associated with enhanced malignancy in colon cancer. British Journal of Cancer, 99 6: 966-973. doi:10.1038/sj.bjc.6604560 79   14 Cited 13 times in Scopus13 0
Weeks, J. Robert, Kees, R. Ursula, Song, Sarah and Morison, M. Ian (2010) Silencing of TESTIN by dense biallelic promoter methylation is the most common molecular event in childhood acute lymphoblastic leukaemia. Molecular Cancer, 9 163: 1-37. doi:10.1186/1476-4598-9-163 76   9 Cited 9 times in Scopus9 0
Mann, Karen M., Ward, Jerrold M., Yew, Christopher Chin Kuan, Kovochich, Anne, Dawson, David W., Black, Michael A., Brett, Benjamin T., Sheetz, Benjamin T., Dupuy, Adam J., Chang, David K., Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Grimmond, Sean M., Rust, Alistair G., Adams, David J., Jenkins, Nancy A., Copeland, Neal G., Australian Pancreatic Cancer Genome Initiative, Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Christina, Nones, Katia, Fink, J. Lynn, Christ, Angelika, Bruxner, Tim, Cloonan, Nicole, Newell, Felicity and Pearson, John V. (2012) Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America, 109 16: 5934-5941. doi:10.1073/pnas.1202490109 100   44 Cited 49 times in Scopus49 9
Kassahn, Karin S., Holmes, Oliver, Nones, Katia, Patch, Ann-Marie, Miller, David K., Christ, Angelika K., Harliwong, Ivon, Bruxner, Timothy J., Xu, Qinying, Anderson, Matthew, Wood, Scott, Leonard, Conrad, Taylor, Darrin, Newell, Felicity, Song, Sarah, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Steptoe, Anita, Pajic, Marina, Cowley, Mark J., Pinese, Mark, Chang, David K., Gill, Anthony J., Johns, Amber L., Wu, Jianmin, Wilson, Peter J., Fink, Lynn, Biankin, Andrew V., Waddell, Nicola, Grimmond, Sean M. and Pearson, John V. (2013) Somatic point mutation calling in low cellularity tumors. PloS One, 8 11: e74380.1-e74380.10. doi:10.1371/journal.pone.0074380 66   1 Cited 1 times in Scopus1 2
Zhao, I., Song, Sarah, Bogossian, Fiona E. and Turner, Catherine T. (2010). The association between shift work and overweight/obesity: findings from the Nurses and Midwives' e-cohort study. In: 3rd Passionate about Practice 2010 Conference, Brisbane, QLD, Austalia, (). 1-3 August 2010. 64  
Zhao, Isabella, Bogossian, Fiona, Song, Sarah and Turner, Catherine (2011) The association between shift work and unhealthy weight: A cross-sectional analysis from the Nurses and Midwives' e-Cohort Study. Journal of Occupational and Environmental Medicine, 53 2: 153-158. doi:10.1097/JOM.0b013e318205e1e8 98   16 Cited 20 times in Scopus20 0
McCart Reed, Amy E., Song, Sarah, Kutasovic, Jamie R., Reid, Lynne E., Valle, Jordan M., Vargas, Ana Cristina, Smart, Chanel E. and Simpson, Peter T. (2013) Thrombospondin-4 expression is activated during the stromal response to invasive breast cancer. Virchows Archiv, 463 4: 535-545. doi:10.1007/s00428-013-1468-3 46   0 Cited 3 times in Scopus3 0
Glyn-Jones, Sarah, Song, Sarah, Black, Michael A, Phillips, Anthony R. J., Choong, Soon Yee and Cooper, Garth J. S. (2007) Transcriptomic analysis of the cardiac left ventricle in a rodent model of diabetic cardiomyopathy: Molecular snapshot of a severe myocardial disease. Physiological Genomics, 28 3: 284-293. doi:10.1152/physiolgenomics.00204.2006 45   17 Cited 15 times in Scopus15 0
Al-Ejeh, Fares, Shi, Wei, Miranda, Mariska, Simpson, Peter T., Vargas, Ana Cristina, Song, Sarah, Wiegmans, Adrian P., Swarbrick, Alex, Welm, Alana L., Brown, Michael P., Chenevix-Trench, Georgia, Lakhani, Sunil R. and Khanna, Kum Kum (2013) Treatment of triple-negative breast cancer using anti-EGFR-directed radioimmunotherapy combined with radiosensitizing chemotherapy and PARP inhibitor. Journal of Nuclear Medicine, 54 6: 913-921. doi:10.2967/jnumed.112.111534 78   9 Cited 11 times in Scopus11 12