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Burrage, Kevin, Mac, Shev and Tian, Tianhai (2006). Accelerated leap methods for simulating discrete stochastic chemical kinetics. In: Christian Commault and Nicholas Marchand, Lecture Notes in Control and Information Sciences: 2nd Multidisciplinary International Symposium on Positive Sys. 2nd Multidisciplinary International Symposium on Positive Sys, Grenoble, France, (359-366). 30 August -1 September, 2006. doi:10.1007/11757344_46 204   3 Cited 3 times in Scopus3 0
MacNamara, S., Burrage, K. and Sidje, R. B. (2006). An improved Finite State Projection Algorithm for the numerical solution of the chemical master equation with applications. In: Wayne Read, Jay W. Larson and A. J. Roberts, Proceedings of the 13th Biennial Computational Techniques and Applications Conference : CTAC-2006 in ANZIAM Journal. CTAC'06 : The 13th Biennial Computational Techniques and Applications Conference, James Cook University, Townsville, (C413-C435). 2-5 July 2006. 78   Cited 0 times in Scopus0
MacNamara, Shev, Burrage, Kevin and Sidje, Roger B. (2008) Application of the strang splitting to the chemical master equation for simulating biochemical kinetics. International Journal of Computational Science, 2 3: 402-421. 181  
Hegland, M, Burden, C, Santoso, L, MacNamara, S and Booth, H (2007) A solver for the stochastic master equation applied to gene regulatory networks. Journal of Computational And Applied Mathematics, 205 2: 708-724. doi:10.1016/j.cam.2006.02.053 130   42 Cited 52 times in Scopus52 0
Sidje, R. B., Burrage, K. and Macnamara, S. (2007) Inexact uniformization method for computing transient distributions of Markov chains. Siam Journal On Scientific Computing, 29 6: 2562-2580. doi:10.1137/060662629 93   17 Cited 21 times in Scopus21 0
MacNamara, Shev and Burrage, Kevin (2009) Krylov and steady-state techniques for the solution of the chemical master equation for the mitogen-activated protein kinase cascade. Numerical Algorithms, 51 3: 281-307. doi:10.1007/s11075-008-9239-y 127   1 Cited 1 times in Scopus1 0
Macnamara, Shev, Burrage, Kevin and Sidje, Roger B. (2007) Multiscale modeling of chemical kinetics via the master equation. Multiscale Modeling And Simulation, 6 4: 1146-1168. doi:10.1137/060678154 79   0 Cited 35 times in Scopus35 0
MacNamara, S., Burrage, K. and Sidje, R. B. (2007). Stochastic analysis of the VEGF receptor response curve. In: Computational Models For Life Sciences (CMLS '07): Proceedings of International Symposium on Computational Models for Life Sciences. International Symposium on Computational Models for Life Sciences, Queensland, Australia, (238-247). 17-19 December, 2007. doi:10.1063/1.2816628 54   0 Cited 0 times in Scopus0 0
MacNamara, Shev, Bersani, Alberto M., Burrage, Kevin and Sidje, Roger B. (2008) Stochastic chemical kinetics and the total quasi-steady-state assumption: Application to the stochastic simulation algorithm and chemical master equation. Journal of Chemical Physics, 129 9: 095105-1-095105-13. doi:10.1063/1.2971036 38   22 Cited 30 times in Scopus30 0
Macnamara, S and Burrage, K (2010) Stochastic modeling of naïve T cell homeostasis for competing clonotypes VIA the master equation. Multiscale Modeling and Simulation, 8 4: 1325-1347. doi:10.1137/09077182X 39   1 Cited 2 times in Scopus2 0
Burrage, Kevin, Estivill-Castro, Vladimir, Fellows, Michael R., Langston, Michael A., Mac, Shev and Rosamond, Frances A. (2006). The Undirected Feedback Vertex set Problem has a Poly(k) Kernel. In: Lecture Notes in Computer Science. IWPEC 2006, Zürich, Switzerland, (192-202). 13 - 15 September 2006. 56   18 Cited 24 times in Scopus24