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Krömer, Jens, Quek, Lake-Ee and Nielsen, Lars (2009) 13C-fluxomics: A tool for measuring metabolic phenotypes. Australian Biochemist, 40 3: 17-20. 172  
Kromer, Jens Olaf, Heinzle, Elmar, Schroder, Hartwig and Wittmann, Christoph (2006) Accumulation of homolanthionine and activation of a novel pathway for isoleucine biosynthesis in corynebacterium glutamicum McbR deletion strains. Journal of Bacteriology, 188 2: 609-618. doi:10.1128/JB.188.2.609-618.2006 108   20 Cited 24 times in Scopus24 0
Brennan, Timothy C. R., Turner, Christopher D., Kroemer, Jens O. and Nielsen, Lars K. (2012) Alleviating monoterpene toxicity using a two-phase extractive fermentation for the bioproduction of jet fuel mixtures in Saccharomyces cerevisiae. Biotechnology and Bioengineering, 109 10: 2513-2522. doi:10.1002/bit.24536 77   19 Cited 21 times in Scopus21 1
Watson, Jabin R., Brennan, Timothy C. R., Degnan, Bernard M., Degnan, Sandie M. and Kromer, Jens O. (2014) Analysis of the biomass composition of the demosponge Amphimedon queenslandica on Heron Island Reef, Australia. Marine Drugs, 12 6: 3733-3753. doi:10.3390/md12063733 17   0 Cited 0 times in Scopus0 1
Vickers, Claudia E., Blank, Lars M. and Kromer, Jens O. (2010) Chassis cells for industrial biochemical production. Nature Chemical Biology, 6 12: 875-877. doi:10.1038/nchembio.484 105   10 Cited 10 times in Scopus10 0
Arifin, Yalun, Sabri, Suriana, Sugiarto, Haryadi, Krömer, Jens O., Vickers, Claudia E. and Nielsen, Lars K. (2011) Deletion of cscR in Escherichia coli W improves growth and poly-3-hydroxybutyrate (PHB) production from sucrose in fed batch culture. Journal of Biotechnology, 156 4: 275-278. doi:10.1016/j.jbiotec.2011.07.003 67   7 Cited 9 times in Scopus9 0
Watson, Jabin, Degnan, Bernard, Degnan, Sandie and Krömer, Jens O. (2014). Determining the biomass composition of a sponge holobiont for flux analysis. In Jens O. Krömer, Lars K. Nielsen and Lars M. Blank (Ed.), Metabolic flux analysis: methods and protocols (pp. 107-125) New York, NY, United States: Humana Press. doi:10.1007/978-1-4939-1170-7_7 18   0
Harnisch, Falk, Rosa, Luis F. M., Kracke, Frauke, Virdis, Benardino and Krömer, Jens O. (2014) Electrifying white biotechnology: engineering and economic potential of electricity-driven bio-production. ChemSusChem, 8 5: 758-766. doi:10.1002/cssc.201402736 24   1 Cited 0 times in Scopus0 74
Arifin, Yalun, Archer, Colin, Lim, SooA, Quek, Lake-Ee, Sugiarto, Haryadi, Marcellin, Esteban, Vickers, Claudia E., Kromer, Jens O. and Nielsen, Lars K. (2014) Escherichia coli W shows fast, highly oxidative sucrose metabolism and low acetate formation. Applied Microbiology and Biotechnology, 98 21: 9033-9044. doi:10.1007/s00253-014-5956-4 27   0 Cited 0 times in Scopus0 0
Vickers, Claudia E., Klein-Marcuschamer, Daniel and Kromer, Jens O. (2012) Examining the feasibility of bulk commodity production in Escherichia coli. Biotechnology Letters, 34 4: 585-596. doi:10.1007/s10529-011-0821-3 139   16 Cited 18 times in Scopus18 0
Winter, Gal and Krömer, Jens (2013) Fluxomics - connecting 'omics analysis and phenotypes. Environmental Microbiology, 15 7: 1901-1916. doi:10.1111/1462-2920.12064 34   10 Cited 15 times in Scopus15 5
Kracke, Frauke and Kromer, Jens O. (2014) Identifying target processes for microbial electrosynthesis by elementary mode analysis. Bmc Bioinformatics, 15 1: 410-410. doi:10.1186/s12859-014-0410-2 9   Cited 0 times in Scopus0 4
Wittmann, Christoph, Kroemer, Jens O., Kiefer, Patrick, Binz, Tina and Heinzle, Elmar (2004) Impact of the cold shock phenomenon on quantification of intracellular metabolites in bacteria. Analytical Biochemistry, 327 1: 135-139. doi:10.1016/j.ab.2004.01.002 75   132 Cited 138 times in Scopus138 0
Kromer, Jens Olaf, Sorgenfrei, Oliver, Klopprogge, Kai, Heinzle, Elmar and Wittman, Christoph (2004) In-depth profiling of lysine-producing Corynebacterium glutamicum by combined analysis of the transcriptome, metabolome, and fluxome. Journal of Bacteriology, 186 6: 1769-1784. doi:10.1128/JB.186.6.1769-1784.2004 83   105 Cited 117 times in Scopus117 0
Winter, Gal, Averesch, Nils J. H., Nunez-Bernal, Dariela and Kromer, Jens O. (2014) In vivo instability of chorismate causes substrate loss during fermentative production of aromatics. Yeast, 31 9: 333-341. doi:10.1002/yea.3025 25   1 Cited 2 times in Scopus2 0
Kromer, Jens Olaf, Fritz, Michel, Heinzle, Elmar and Wittman, Christoph (2005) In vivo quantification of intracellular amino acids and intermediates of the methionine pathway in Corynebacterium glutamicum. Analytical Biochemistry, 340 1: 171-173. doi:10.1016/j.ab.2005.01.027 141 2 51 Cited 56 times in Scopus56 0
Saunders, Eleanor C., Ng, William W., Chambers, Jennifer M., Ng, Milica, Naderer, Thomas, Kromer, Jens O., Likic, Vladimir A. and McConville, Malcolm J. (2011) Isotopomer profiling of leishmania mexicana promastigotes reveals important roles for succinate fermentation and aspartate uptake in tricarboxylic acid cycle (TCA) anaplerosis, glutamate synthesis, and growth. Journal of Biological Chemistry, 286 31: 27706-27717. doi:10.1074/jbc.M110.213553 47   23 Cited 28 times in Scopus28 0
Arifin, Y., Sugiarto, H., Sabri, S., Kromer, J. O., Vickers, C. E. and Nielsen, L. K. (2010). Metabolic engineering of sucrose utilizing Escherichia coli for polyhydroxybutyrate production. In: 14th International Biotechnology Symposium and Exhibition (IBS-2008), Rimini, Italy, (S72-S73). 14-18 September 2010. doi:10.1016/j.jbiotec.2010.08.189 64   1 0
Quek, Lake-Ee, Dietmair, Stefanie, Kromer, Jens O. and Nielsen, Lars K. (2010) Metabolic flux analysis in mammalian cell culture. Metabolic Engineering, 12 2: 161-171. doi:10.1016/j.ymben.2009.09.002 139   61 Cited 74 times in Scopus74 0
Kromer, Jens Olaf, Wittman, Christoph, Schroder, Hartwig and Heinzle, Elmar (2006) Metabolic pathway analysis for rational design of L-methionine production by Escherichia coli and Corynebacterium glutamicum. Metabolic Engineering, 8 4: 353-369. doi:10.1016/j.ymben.2006.02.001 87   51 Cited 60 times in Scopus60 0
Turner, Jennifer, Quek,Lake-Ee, Titmarsh, Drew, Kromer, Jens O., Kao, Li-Pin, Nielsen, Lars, Wolvetang, Ernst and Cooper-White, Justin (2014) Metabolic profiling and flux analysis of MEL-2 human embryonic stem cells during exponential growth at physiological and atmospheric oxygen concentrations. PLoS One, 9 11: e112757-e112757. doi:10.1371/journal.pone.0112757 31   0 Cited 0 times in Scopus0 8
Schneider, Konstantin, Kromer, Jens Olaf, Wittmann, Christoph, Alves-Rodrigues, Isabel, Meyerhans, Andreas, Diez, Juana and Heinzle, Elmar (2009) Metabolite profiling studies in Saccharomyces cerevisiae: An assisting tool to prioritize host targets for antiviral drug screening. Microbial Cell Factories, 8 Article number 12: 12-1-12-14. doi:10.1186/1475-2859-8-12 73   10 Cited 9 times in Scopus9 0
Schneider, K., Kromer, J.O., Christoph, W., Alves-Rodrigues, I., Meyerhans, A., Diez, J. and Heinzle, E. (2009). Metabolite profiling studies in Saccharomyces cerevisiae: an assisting tool to prioritize host targets for antiviral drug screening. In: Abstracts of the 14th European Congress on Biotechnology. 14th European Congress on Biotechnology, Barcelona, Spain, (S4-S4). 13–16 September 2009. doi:10.1016/j.nbt.2009.06.012 25   0 0
Dietmair, Stefanie, Timmins, Nicholas E., Chrysanthopoulos, Panagiotis, Gray, Peter P., Krömer, Jens O. and Nielsen, Lars K. (2012). Metabolomic analysis of CHO cultures with different growth characteristics – development of a metabolite extraction protocol for suspension adapted mammalian cells. In Nigel Jenkins, Niall Barron and Paula Alves (Ed.), Proceedings of the 21st Annual Meeting of the European Society for Animal Cell Technology (ESACT), Dublin, Ireland, June 7-10, 2009 (pp. 37-41) Dordrecht, Netherlands: Springer. 131  
Quek, Lake-Ee, Wittmann, Christoph, Nielsen, Lars K. and Kromer, Jens O. (2009) OpenFLUX: Efficient modelling software for 13C-based metabolic flux analysis. Microbial Cell Factories, 8 25.1-25.15. doi:10.1186/1475-2859-8-25 150   65 Cited 79 times in Scopus79 0
Brennan, Timothy C. R., Kroemer, Jens O. and Nielsen, Lars K. (2013) Physiological and transcriptional responses of saccharomyces cerevisiae to d-limonene show changes to the cell wall but not to the plasma membrane. Applied and Environmental Microbiology, 79 12: 3590-3600. doi:10.1128/AEM.00463-13 41   6 Cited 6 times in Scopus6 0
Kromer, Jens O., Bolten, Christoph J., Heinzle, Elmar, Schröder, Hartwig and Christoph, Wittmann (2008) Physiological response of Corynebacterium glutamicum to oxidative stress induced by deletion of the transcriptional repressor McbR. Microbiology, 154 12: 3917-3930. doi:10.1099/mic.0.2008/021204-0 57   24 Cited 23 times in Scopus23 0
Kroemer, Jens O., Nunez-Bernal, Dariela, Averesch, Nils J. H., Hampe, Jennifer, Varela, Javier and Varela, Cristian (2013) Production of aromatics in Saccharomyces cerevisiae-a feasibility study. Journal of Biotechnology, 163 2: 184-193. doi:10.1016/j.jbiotec.2012.04.014 79   4 Cited 4 times in Scopus4 0
Bruschi, Michele, Kroemer, Jens O., Steen, Jennifer A. and Nielsen, Lars K. (2014) Production of the short peptide surfactant DAMP4 from glucose or sucrose in high cell density cultures of Escherichia coli BL21(DE3). Microbial Cell Factories, 13 1: 1-9. doi:10.1186/s12934-014-0099-y 19   0 Cited 0 times in Scopus0 0
Kromer, Jens O., Dietmair, Stefanie, Jacob, Shana S. and Nielsen, Lars K. (2011) Quantification of L-alanyl-L-glutamine in mammalian cell culture broth: Evaluation of different detectors. Analytical Biochemistry, 416 1: 129-131. doi:10.1016/j.ab.2011.05.019 55   2 Cited 2 times in Scopus2 0
Krömer, Jens O. (2011) Quantification of microbial phenotypes using 13C-fluxomics. Microbiology Australia, 2011 4: 163-165. 23  
Kroemer, Jens, Heinzle, Elmar and Wittmann, Christoph (2006) Quantification of S-adenosyl methionine in microbial cell extracts. Biotechnology Letters, 28 2: 69-71. doi:10.1007/s10529-005-4947-z 68   0 Cited 1 times in Scopus1 0
Marcellin, Esteban, Nielsen, Lars K., Abeydeera, Peter and Kromer, Jens O. (2009) Quantitative analysis of intracellular sugar phosphates and sugar nucleotides in encapsulated streptococci using HPAEC-PAD. Biotechnology Journal, 4 1: 58-63. doi:10.1002/biot.200800197 86   Cited 9 times in Scopus9 0
Wittmann, Christoph, Weber, Jan, Betiku, Eriola, Kromer, Jens, Böhm, Daniela and Rinas, Ursula (2007) Response of fluxome and metabolome to temperature-induced recombinant protein synthesis in Escherichia coli. Journal of Biotechnology, 132 4: 375-384. doi:10.1016/j.jbiotec.2007.07.495 90   38 Cited 41 times in Scopus41 0
Nicolas, Cécile, Kiefer, Patrick, Letisse, Fabien, Kromer, Jens, Massou, Stéphane, Soucaille, Philippe, Wittmann, Christoph, Lindley, Nic D. and Portais, Jean-Charles (2007) Response of the central metabolism of Escherichia coli to modified expression of the gene encoding the glucose-6-phosphate dehydrogenase. FEBS Letters, 581 20: 3771-3776. doi:10.1016/j.febslet.2007.06.066 73   27 Cited 30 times in Scopus30 0
Varela, Cristian, Schmidt, Simon A., Borneman, Anthony R., Krömer, Jens O., Khan, Alamgir, Chambers, Paul J. and The Australian Wine Yeast Systems Biology Consortium (2011) Systems biology: a new paradigm for industrial yeast strain development. Microbiology Australia, 2011 4: 151-155. 19  
Averesch, Nils J. H. and Kromer, Jens O. (2014) Tailoring strain construction strategies for muconic acid production in S. cerevisiae and E. coli. Metabolic Engineering Communications, 1 1: 19-28. doi:10.1016/j.meteno.2014.09.001 26   Cited 1 times in Scopus1 1
Dietmair, Stefanie, Timmins, Nicholas E., Gray, Peter P., Nielsen, Lars K. and Kromer, Jens O. (2010) Towards quantitative metabolomics of mammalian cells: Development of a metabolite extraction protocol. Analytical Biochemistry, 404 2: 155-164. doi:10.1016/j.ab.2010.04.031 90   82 Cited 83 times in Scopus83 0
Schmidt, Simon A., Jacob, Shana S., Ahn, Seong Beom, Rupasinghe, Thusitha, Kroemer, Jens O., Khan, Alamgir and Varela, Cristian (2013) Two strings to the systems biology bow: co-extracting the metabolome and proteome of yeast. Metabolomics, 9 1: 173-188. doi:10.1007/s11306-012-0437-1 42   4 Cited 5 times in Scopus5 1