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Tallack, Michael R., Whitington, Tom, Yuen, Wai Shan, Wainwright, Elanor N., Keys, Janelle R., Gardiner, Brooke B., Nourbakhsh, Ehsan, Cloonan, Nicole, Grimmond, Sean M., Bailey, Timothy L. and Perkins, Andrew C. (2010) A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells. Genome Research, 20 8: 1052-1063. doi:10.1101/gr.106575.110 83 74 83 Cited 86 times in Scopus86 1
Sparrow, Duncan B., McInerney-Leo, Aideen, Gucev, Zoran S., Gardiner, Brooke, Marshall, Mhairi, Leo, Paul J., Chapman, Deborah L., Tasic, Velibor, Shishko, Abduhadi, Brown, Matthew A., Duncan, Emma L. and Dunwoodie, Sally L. (2013) Autosomal dominant spondylocostal dysostosis is caused by mutation in TBX6. Human Molecular Genetics, 22 8: 1625-1631. doi:10.1093/hmg/ddt012 64   10 Cited 10 times in Scopus10 0
Costello M.-E., Ciccia F., Willner D., Warrington N., Robinson P.C., Gardiner B., Marshall M., Kenna T.J., Triolo G. and Brown M.A. (2015) Brief Report: Intestinal dysbiosis in ankylosing spondylitis. Arthritis and Rheumatology, 67 3: 686-691. doi:10.1002/art.38967 10   0 Cited 0 times in Scopus0 32
McInerney-Leo, A. M., Duncan, E. L., Leo, P. J., Gardiner, B., Bradbury, L. A., Harris, J. E., Clark, G. R., Brown, M. A. and Zankl, A. (2014) COL1A1 C-propeptide cleavage site mutation causes high bone mass, bone fragility and jaw lesions: a new cause of gnathodiaphyseal dysplasia?. Clinical Genetics, 1-7. doi:10.1111/cge.12440 26   Cited 0 times in Scopus0 0
McInerney-Leo, Aideen, Sparrow, Duncan B., Harris, Jessica, Gardiner, Brooke, Marshall, Mhairi, O'Reilly, Victoria C., Shi, Hongjun, Brown, Matthew A., Leo, Paul, Zankl, Andreas, Dunwoodie, Sally L. and Duncan, Emma (2015) Compound heterozygous mutations in RIPPLY2 associated with vertebral segmentation defects. Human Molecular Genetics, 24 5: 1234-1242. doi:10.1093/hmg/ddu534 22   0 Cited 0 times in Scopus0 3
Kolle, Gabriel, Shepherd, Jill L., Gardiner, Brooke, Kassahn, Karin S., Cloonan, Nicole, Wood, David L. A., Nourbakhsh, Ehsan, Taylor, Darrin F., Wani, Shivangi, Chy, Hun S., Zhou, Qi, McKernan, Kevin, Kuersten, Scott, Laslett, Andrew L. and Grimmond, Sean M. (2011) Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells. Genome Research, 21 12: 2014-2025. doi:10.1101/gr.119321.110 72   13 Cited 13 times in Scopus13 2
Halbritter, Jan, Bizet, Albane A., Schmidts, Miriam, Porath, Jonathan D., Braun, Daniela A., Gee, Heon Yung, McInerney-Leo, Aideen M., Krug, Pauline, Filhol, Emilie, Davis, Erica E., Airik, Rannar, Czarnecki, Peter G., Lehman, Anna M., Trnka, Peter, Nitschke, Patrick, Bole-Feysot, Christine, Schueler, Markus, Knebelmann, Bertrand, Burtey, Stephane, Szabo, Attila J., Tory, Kalman, Leo, Paul J., Gardiner, Brooke, McKenzie, Fiona A., Zankl, Andreas, Brown, Matthew A., Hartley, Jane L., Maher, Eamonn R., Li, Chunmei, Leroux, Michel R., Scambler, Peter J., Zhan, Shing H., Jones, Steven J., Kayserili, Hulya, Tuysuz, Beyhan, Moorani, Khemchand N., Constantinescu, Alexandru, Krantz, Ian D., Kaplan, Bernard S., Shah, Jagesh V., Hurd, Toby W., Doherty, Dan, Katsanis, Nicholas, Duncan, Emma L., Otto, Edgar A., Beales, Philip L., Mitchison, Hannah M., Saunier, Sophie and Hildebrandt, Friedhelm (2013) Defects in the IFT-B Component IFT172 Cause Jeune and Mainzer-Saldino Syndromes in Humans. American Journal of Human Genetics, 93 5: 915-925. doi:10.1016/j.ajhg.2013.09.012 38   14 Cited 15 times in Scopus15 6
Bruce, Stephen J., Gardiner, Brooke B., Burke, Les J., Gongora, Milena, Grimmond, Sean M. and Perkins, Andrew C. (2007) Dynamic transcription programs during ES cell differentiation towards mesoderm in serum versus serum-free (BMP4) culture. BMC Genomics, 8 1-26. doi:10.1186/1471-2164-8-365 72   43 Cited 43 times in Scopus43 0
Costello, Mary-Ellen, Ciccia, Francesco, Gardiner, Brooke, Marshall, Mhairi, Willner, Dana, Kenna, Tony, Triolo, Giovanni and Brown, Matthew A. (2013). Evidence Of a Microbial Signature In The Intestinal Microbiome In Ankylosing Spondylitis.. In: 77th Annual Meeting of the American-College-of-Rheumatology / 48th Annual Meeting of the Association-of-Rheumatology-Health-Professionals, San Diego Ca, (S1066-S1067). Oct 25-30, 2013. doi:10.1002/art.38216 65   0 0
Qiu, L., Zhang, M., Sturm, R. A., Gardiner, B, Tonks, I, Kay, G and Parsons, P. G. (2000) Inhibition of melanin synthesis by cystamine in human melanoma cells. Journal of Investigative Dermatology, 114 1: 21-27. doi:10.1046/j.1523-1747.2000.00826.x 117   14 Cited 15 times in Scopus15 0
Hudson, T. J., Anderson, W., Aretz, A., Barker, A. D., Grimmond, S. M., Pearson, J. V., Cloonan, N., Gardiner, B. A., Waddell, N. J., Wilson, P. J., Wainwright, B. J. and The International Cancer Genome Consortium (2010) International network of cancer genome projects. Nature, 464 7291: 993-998. doi:10.1038/nature08987 94   462 Cited 515 times in Scopus515 19
Dawson, Paul Anthony, Gardiner, Brooke, Lee, Soohyun, Grimmond, Sean and Markovich, Daniel (2008) Kidney transcriptome reveals altered steroid homeostasis in NaS1 sulfate transporter null mice. Journal of Steroid Biochemistry And Molecular Biology, 112 1-3: 55-62. doi:10.1016/j.jsbmb.2008.08.003 77   12 Cited 12 times in Scopus12 0
Tallack, M, Whitington, T, Gardiner, B, Wainwright, E, Keys, J, Monet, M, Nourbakhsh, E, Cloonan, N, Grimmond, S, Bailey, T and Perkins, AC (2009). Klf1 regulatory networks in primary erythroid cells. In: Blood. 51st Annual Meeting of the American-Society-of-Hematology, New Orleans, LA, U.S.A., (591-591). 5-8 December 2009. 60   0
Dinger, Marcel E., Amaral, Paulo P., Mercer, Tim R, Pang, Ken C., Bruce, Stephen J., Gardiner, Brooke B., Askarian-Amiri, Marjan E., Ru, Kelin, Solda, Giulia, Simons, Cas, Sunkin, Susan M., Crowe, Mark L., Grimmond, Sean M, Perkins, Andrew C. and Mattick, John S. (2008) Long Noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Research, 18 9: 1433-1445. doi:10.1101/gr.078378.108 87   274 Cited 281 times in Scopus281 4
Cloonan, Nicole, Wani, Shivangi, Xu, Qinying, Gu, Jian, Lea, Kristi, Heater, Sheila, Barbacioru, Catalin, Steptoe, Anita L., Martin, Hilary C., Nourbakhsh, Ehsan, Krishnan, Keerthana, Gardiner, Brooke, Wang, Xiaohui, Nones, Katia, Steen, Jason A., Matigan, Nicholas A., Wood, David L., Kassahn, Karin S., Waddell, Nic, Shepherd, Jill, Lee, Clarence, Ichikawa, Jeff, McKernan, Kevin, Bramlett, Kelli, Kuersten, Scott and Grimmond, Sean M. (2011) MicroRNAs and their isomiRs function cooperatively to target common biological pathways. Genome Biology: biology for the post-genomic era, 12 R126: 1-20. doi:10.1186/gb-2011-12-12-r126 55 1 76 Cited 82 times in Scopus82 12
Gardiner, B. (2005). Molecular changes defining the transition from radial to vertical growth phase in melanoma PhD Thesis, Institute for Molecular Bioscience, The University of Queensland. 105  
Schmidts, Miriam, Vodopiutz, Julia, Christou-Savina, Sonia, Cortés, Claudio R., McInerney-Leo, Aideen M., Emes, Richard D., Arts, Heleen H., Tüysüz, Beyhan, D'Silva, Jason, Leo, Paul J., Giles, Tom C., Oud, Machteld M., Harris, Jessica A., Koopmans, Marije, Marshall, Mhairi, Elçioglu, Nursel, Kuechler, Alma, Bockenhauer, Detlef, Moore, Anthony T., Wilson, Louise C., Janecke, Andreas R., Hurles, Matthew E., Emmet, Warren, Gardiner, Brooke, Streubel, Berthold, Dopita, Belinda, Zankl, Andreas, Kayserili, Hülya, Scambler, Peter J., Brown, Matthew A., Beales, Philip L., Wicking, Carol, UK10K, Duncan, Emma L. and Mitchison, Hannah M. (2013) Mutations in the gene encoding IFT dynein complex component WDR34 cause Jeune asphyxiating thoracic dystrophy. American Journal of Human Genetics, 93 5: 932-944. doi:10.1016/j.ajhg.2013.10.003 58 1 9 Cited 10 times in Scopus10 2
Smit, Darren J., Gardiner, Brooke B. and Sturm, Richard A. (2007) Osteonectin downregulates E-cadherin, induces Osteopontin and Focal adhesion kinase activity stimulating an invasive melanoma phenotype. International Journal of Cancer, 121 12: 2653-2660. doi:10.1002/ijc.23039 64   24 Cited 29 times in Scopus29 0
Sturm, Richard A., Satyamoorthy, Kapaeth, Meier, Freidegund, Gardiner, Brooke B., Smit, Darren J., Vaidya, Bhavesh and Herlyn, Meenhard (2002) Osteonectin/SPARC induction by ectopic beta(3) integrin in human radial growth phase primary melanoma cells. Cancer Research, 62 1: 226-232. 98   44 Cited 47 times in Scopus47
Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Gingras, Marie-Claude, Muthuswamy, Lakshmi B., Johns, Amber L., Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Wu, Jianmin, Chang, David K., Cowley, Mark J., Gardiner, Brooke B., Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Pajic, Marina, Scarlett, Christopher J., Gill, Anthony J., Pinho, Andreia V., Rooman, Ilse, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Christina, Nones, Katia, Fink, J. Lynn, Christ, Angelika, Bruxner, Tim, Cloonan, Nicole, Kolle, Gabriel, Newell, Felicity, Pinese, Mark, Mead, R. Scott, Humphris, Jeremy L., Kaplan, Warren, Jones, Marc D., Colvin, Emily K., Nagrial, Adnan M., Humphrey, Emily S., Chou, Angela, Chin, Venessa T., Chantrill, Lorraine A., Mawson, Amanda, Samra, Jaswinder S., Kench, James G., Lovell, Jessica A., Daly, Roger J., Merrett, Neil D., Toon, Christopher, Epari, Krishna, Nguyen, Nam Q., Barbour, Andrew, Zeps, Nikolajs, Australian Pancreatic Cancer Genome Initiative, Pearson, John V. and Grimmond, Sean M. (2012) Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature, 491 7424: 399-405. doi:10.1038/nature11547 211   247 Cited 241 times in Scopus241 101
Suen, JY, Gardiner, B, Grimmond, S and Fairlie, DP (2010) Profiling gene expression induced by protease-activated receptor 2 (PAR2) activation in human kidney cells. PLoS One, 5 11: e13809-1-e13809-14. doi:10.1371/journal.pone.0013809 39   22 Cited 23 times in Scopus23 0
Dawson, Paul A., Huxley, S., Gardiner, B., Tran, T., McAuley, J. L., Grimmond, S. M., McGuckin, M. A. and Markovich, D. (2009) Reduced mucin sulfonation and impaired intestinal barrier function in the hyposulfataemic NaS1 null mouse. Gut, 58 7: 910-919. doi:10.1136/gut.2007.147595 85   32 Cited 32 times in Scopus32 0
Thiagarajan, Rathi D., Cloonan, Nicole, Gardiner, Brooke B., Mercer, Tim R., Kolle, Gabriel, Nourbaksh, Ehsan, Wani, Shivangi, Tang, Dave, Krishnan, Keerthana, Georgas, Kylie M., Rumballe, Bree A., Chiu, Han S., Steen, Jason A., Mattick, John S., Little, Melissa H. and Grimmond, Sean M. (2011) Refining transcriptional programs in kidney development by integration of deep RNA-sequencing and array-based spatial profiling. BMC Genomics, 12 441-1-441-16. doi:10.1186/1471-2164-12-441 52   11 Cited 11 times in Scopus11 1
Mercer, Tim R., Dinger, Marcel E., Bracken, Cameron P., Kolle, Gabriel, Szubert, Jan M., Korbie, Darren J., Askarian-Amiri, Marjan E., Gardiner, Brooke B., Goodall, Gregory J., Grimmond, Sean M. and Mattick, John S. (2010) Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome. Genome Research, 20 12: 1639-1650. doi:10.1101/gr.112128.110 80   30 Cited 34 times in Scopus34 0
McInerney-Leo, Aideen M., Schmidts, Miriam, Cortés, Claudio R., Leo, Paul J., Gener, Blanca, Courtney, Andrew D., Gardiner, Brooke, Harris, Jessica A., Lu, Yeping, Marshall, Mhairi, Scrambler, Peter J., Beales, Philip L., Brown, Matthew A., Zankl, Andreas, Mitchison, Hannah M., Duncan, Emma L., Wicking, Carol and UK10K Consortium (2013) Short-rib polydactyly and Jeune Syndromes are caused by mutations in WDR60. American Journal of Human Genetics, 93 3: 515-523. doi:10.1016/j.ajhg.2013.06.022 63   9 Cited 12 times in Scopus12 4
Caruana, Georgina, Cullen-McEwen, Luise, Nelson, Amy L., Kostoulias, Xenia, Woods, Kyra, Gardiner, Brooke, Davis, Melissa J., Taylor, Darrin F., Teasdale, Rohan D., Grimmond, Sean M., Little, Melissa H. and Bertram, John F. (2006) Spatial gene expression in the T-stage mouse metanephros. Gene Expression Patterns, 6 8: 807-825. doi:10.1016/j.modgep.2006.02.001 112   19 Cited 22 times in Scopus22 0
Cloonan, Nicole, Forrest, Alistair R. R., Kolle, Gabriel, Gardiner, Brooke B. A., Faulkner, Geoffrey J., Brown, Mellissa K., Taylor, Darrin F ., Steptoe, Anita L., Wani, Shivangi, Bethel, Graeme, Robertson, Alan J., Perkins, Andrew C., Bruce, Stephen J., Clarence, C. Lee, Ranade, Swati S., Peckham, Heather E, Manning, Jonathan M, McKernan, Kevin J and Grimmond, Sean M (2008) Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nature Methods, 5 7: 613-619. doi:10.1038/nmeth.1223 210   485 Cited 508 times in Scopus508 25
Dawson, P. A., Gardiner, B., Lee, S., Ku, and Markovich, D. (2005). Sulphate ions in mammalian physiology: lessons from sulphate transporter knock-out mice. In: S. Broer, Proceedings of the Australian Physiological Society. AuPS/ASB Canberra 2005 Meeting, Canberra Rydges Lakeside Hotel, (20-20). 27-30 September. 47  
Challen, G., Gardiner, B., Caruana, G., Kostoulias, X., Martinez, G., Crowe, M., Taylor, D. F., Bertram, J., Little, M. and Grimmond, S. M. (2005) Temporal and spatial transcriptional programs in murine kidney development. Physiological Genomics, 23 2: 159-171. doi:10.1152/physiolgenomics.00043.2005 102   42 Cited 48 times in Scopus48 0
Laslett, Andrew L., Grimmond, Sean, Gardiner, Brooke, Stamp, Lincon, Lin, Adelia, Hawes, Susan M, Wormald, Sam, Nikolic-Paterson, David, Haylock, David and Pera, Martin F. (2007) Transcriptional analysis of early lineage commitment in human embryonic stem cells. BMC Developmental Biology, 7 12: 1-18. doi:10.1186/1471-213X-7-12 66   57 Cited 60 times in Scopus60 0
Dawson, P. A., Gardiner, B., Grimmond, S. and Markovich, D. (2006) Transcriptional profile reveals altered hepatic lipid and cholesterol metabolism in hyposulfatemic NaS1 null mice. Physiological Genomics, 26 2: 116-124. doi:10.1152/physiolgenomics.00300.2005 46   16 Cited 16 times in Scopus16 0
Perkins, A. C., Bruce, S., Dinger, M., Gardiner, B., Steptoe, A., Burke, L., Mattick, J. S. and Grimmond, S. M. (2006). Transcription factors, non-coding RNAs and ES cell differentiation in vitro and in vivo. In: Transgenic Research. 7th Transgenic Technology Meeting (TT2007), Brisbane, Australia, (778-778). 12-14 February, 2007. doi:10.1007/s11248-006-9047-x 94   0 0
McInerney-Leo, Aideen M., Marshall, Mhairi S., Gardiner, Brooke, Benn, Diana E., McFarlane, Janelle, Robinson, Bruce G., Brown, Matthew A., Leo, Paul J., Clifton-Bligh, Roderick J. and Duncan, Emma L. (2014) Whole exome sequencing is an efficient and sensitive method for detection of germline mutations in patients with phaeochromcytomas and paragangliomas. Clinical Endocrinology, 80 1: 25-33. doi:10.1111/cen.12331 38   7 Cited 8 times in Scopus8 0
McInerney-Leo, Aideen, Harris, Jessica E., Leo, Paul, Marshall, Mhairi, Gardiner, Brooke, Kinning, Esther, Leong, Huey Yin, McKenzie, Fiona, Ong, PeiTee, Vodopiutz, Julia, Wicking, Carol A., Brown, Matthew A., Zanki, Andreas and Duncan, Emma (2014) Whole exome sequencing is an efficient, sensitive and specific method for determining the genetic cause of short-rib thoracic dystrophies. Clinical Genetics, . doi:10.1111/cge.12550 25   Cited 0 times in Scopus0 2
McInerney-Leo, Aideen M., Marshall, Mhairi S., Gardiner, Brooke, Coucke, Paul J., Van Laer, Lut, Loeys, Bart L., Summers, Kim M., Symoens, Sofie, West, Jennifer A., West, Malcolm J., Wordsworth, B. Paul, Zankl, Andreas, Leo, Paul J., Brown, Matthew A. and Duncan, Emma L. (2013) Whole exome sequencing is an efficient, sensitive and specific method of mutation detection in osteogenesis imperfecta and Marfan syndrome. BoneKEy Reports, 2 456: 1-9. doi:10.1038/bonekey.2013.190 45 2 0
Gardiner, M. R., Gongora, M., Gardiner, B., Grimmond, S. and Perkins, A. C. (2007). Zebrafish klf4 plays a global role in primitive erythropoiesis. In: Blood Cells, Molecules, and Diseases. 15th Conference on Hemoglobin Switching, Oxford, England, (169-169). 14-18 September 2006. doi:10.1016/j.bcmd.2006.10.113 106   0 0