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Tallack, Michael R., Whitington, Tom, Yuen, Wai Shan, Wainwright, Elanor N., Keys, Janelle R., Gardiner, Brooke B., Nourbakhsh, Ehsan, Cloonan, Nicole, Grimmond, Sean M., Bailey, Timothy L. and Perkins, Andrew C. (2010) A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells. Genome Research, 20 8: 1052-1063. doi:10.1101/gr.106575.110 80 68 78 Cited 81 times in Scopus81 1
Sparrow, Duncan B., McInerney-Leo, Aideen, Gucev, Zoran S., Gardiner, Brooke, Marshall, Mhairi, Leo, Paul J., Chapman, Deborah L., Tasic, Velibor, Shishko, Abduhadi, Brown, Matthew A., Duncan, Emma L. and Dunwoodie, Sally L. (2013) Autosomal dominant spondylocostal dysostosis is caused by mutation in TBX6. Human Molecular Genetics, 22 8: 1625-1631. doi:10.1093/hmg/ddt012 54   6 Cited 7 times in Scopus7 0
McInerney-Leo, A. M., Duncan, E. L., Leo, P. J., Gardiner, B., Bradbury, L. A., Harris, J. E., Clark, G. R., Brown, M. A. and Zankl, A. (2014) COL1A1 C-propeptide cleavage site mutation causes high bone mass, bone fragility and jaw lesions: a new cause of gnathodiaphyseal dysplasia?. Clinical Genetics, 1-7. doi:10.1111/cge.12440 16   Cited 0 times in Scopus0 0
Kolle, Gabriel, Shepherd, Jill L., Gardiner, Brooke, Kassahn, Karin S., Cloonan, Nicole, Wood, David L. A., Nourbakhsh, Ehsan, Taylor, Darrin F., Wani, Shivangi, Chy, Hun S., Zhou, Qi, McKernan, Kevin, Kuersten, Scott, Laslett, Andrew L. and Grimmond, Sean M. (2011) Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells. Genome Research, 21 12: 2014-2025. doi:10.1101/gr.119321.110 66   12 Cited 11 times in Scopus11 2
Halbritter, Jan, Bizet, Albane A., Schmidts, Miriam, Porath, Jonathan D., Braun, Daniela A., Gee, Heon Yung, McInerney-Leo, Aideen M., Krug, Pauline, Filhol, Emilie, Davis, Erica E., Airik, Rannar, Czarnecki, Peter G., Lehman, Anna M., Trnka, Peter, Nitschke, Patrick, Bole-Feysot, Christine, Schueler, Markus, Knebelmann, Bertrand, Burtey, Stephane, Szabo, Attila J., Tory, Kalman, Leo, Paul J., Gardiner, Brooke, McKenzie, Fiona A., Zankl, Andreas, Brown, Matthew A., Hartley, Jane L., Maher, Eamonn R., Li, Chunmei, Leroux, Michel R., Scambler, Peter J., Zhan, Shing H., Jones, Steven J., Kayserili, Hulya, Tuysuz, Beyhan, Moorani, Khemchand N., Constantinescu, Alexandru, Krantz, Ian D., Kaplan, Bernard S., Shah, Jagesh V., Hurd, Toby W., Doherty, Dan, Katsanis, Nicholas, Duncan, Emma L., Otto, Edgar A., Beales, Philip L., Mitchison, Hannah M., Saunier, Sophie and Hildebrandt, Friedhelm (2013) Defects in the IFT-B Component IFT172 Cause Jeune and Mainzer-Saldino Syndromes in Humans. American Journal of Human Genetics, 93 5: 915-925. doi:10.1016/j.ajhg.2013.09.012 34   9 Cited 9 times in Scopus9 3
Bruce, Stephen J., Gardiner, Brooke B., Burke, Les J., Gongora, Milena, Grimmond, Sean M. and Perkins, Andrew C. (2007) Dynamic transcription programs during ES cell differentiation towards mesoderm in serum versus serum-free (BMP4) culture. BMC Genomics, 8 1-26. doi:10.1186/1471-2164-8-365 69   42 Cited 41 times in Scopus41 0
Costello, Mary-Ellen, Ciccia, Francesco, Gardiner, Brooke, Marshall, Mhairi, Willner, Dana, Kenna, Tony, Triolo, Giovanni and Brown, Matthew A. (2013). Evidence Of a Microbial Signature In The Intestinal Microbiome In Ankylosing Spondylitis.. In: 77th Annual Meeting of the American-College-of-Rheumatology / 48th Annual Meeting of the Association-of-Rheumatology-Health-Professionals, San Diego Ca, (S1066-S1067). Oct 25-30, 2013. doi:10.1002/art.38216 55   0 0
Qiu, L., Zhang, M., Sturm, R. A., Gardiner, B, Tonks, I, Kay, G and Parsons, P. G. (2000) Inhibition of melanin synthesis by cystamine in human melanoma cells. Journal of Investigative Dermatology, 114 1: 21-27. doi:10.1046/j.1523-1747.2000.00826.x 111   13 0
Hudson, T. J., Anderson, W., Aretz, A., Barker, A. D., Grimmond, S. M., Pearson, J. V., Cloonan, N., Gardiner, B. A., Waddell, N. J., Wilson, P. J., Wainwright, B. J. and The International Cancer Genome Consortium (2010) International network of cancer genome projects. Nature, 464 7291: 993-998. doi:10.1038/nature08987 88   423 Cited 463 times in Scopus463 17
Dawson, Paul Anthony, Gardiner, Brooke, Lee, Soohyun, Grimmond, Sean and Markovich, Daniel (2008) Kidney transcriptome reveals altered steroid homeostasis in NaS1 sulfate transporter null mice. Journal of Steroid Biochemistry And Molecular Biology, 112 1-3: 55-62. doi:10.1016/j.jsbmb.2008.08.003 70   11 Cited 12 times in Scopus12 0
Tallack, M, Whitington, T, Gardiner, B, Wainwright, E, Keys, J, Monet, M, Nourbakhsh, E, Cloonan, N, Grimmond, S, Bailey, T and Perkins, AC (2009). Klf1 regulatory networks in primary erythroid cells. In: Blood. 51st Annual Meeting of the American-Society-of-Hematology, New Orleans, LA, U.S.A., (591-591). 5-8 December 2009. 58   0
Dinger, Marcel E., Amaral, Paulo P., Mercer, Tim R, Pang, Ken C., Bruce, Stephen J., Gardiner, Brooke B., Askarian-Amiri, Marjan E., Ru, Kelin, Solda, Giulia, Simons, Cas, Sunkin, Susan M., Crowe, Mark L., Grimmond, Sean M, Perkins, Andrew C. and Mattick, John S. (2008) Long Noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation. Genome Research, 18 9: 1433-1445. doi:10.1101/gr.078378.108 86   253 Cited 260 times in Scopus260 1
Cloonan, Nicole, Wani, Shivangi, Xu, Qinying, Gu, Jian, Lea, Kristi, Heater, Sheila, Barbacioru, Catalin, Steptoe, Anita L., Martin, Hilary C., Nourbakhsh, Ehsan, Krishnan, Keerthana, Gardiner, Brooke, Wang, Xiaohui, Nones, Katia, Steen, Jason A., Matigan, Nicholas A., Wood, David L., Kassahn, Karin S., Waddell, Nic, Shepherd, Jill, Lee, Clarence, Ichikawa, Jeff, McKernan, Kevin, Bramlett, Kelli, Kuersten, Scott and Grimmond, Sean M. (2011) MicroRNAs and their isomiRs function cooperatively to target common biological pathways. Genome Biology: biology for the post-genomic era, 12 R126: 1-20. doi:10.1186/gb-2011-12-12-r126 50 1 66 Cited 73 times in Scopus73 9
Gardiner, B. (2005). Molecular changes defining the transition from radial to vertical growth phase in melanoma PhD Thesis, Institute for Molecular Bioscience, The University of Queensland. 91  
Schmidts, Miriam, Vodopiutz, Julia, Christou-Savina, Sonia, Cortés, Claudio R., McInerney-Leo, Aideen M., Emes, Richard D., Arts, Heleen H., Tüysüz, Beyhan, D'Silva, Jason, Leo, Paul J., Giles, Tom C., Oud, Machteld M., Harris, Jessica A., Koopmans, Marije, Marshall, Mhairi, Elçioglu, Nursel, Kuechler, Alma, Bockenhauer, Detlef, Moore, Anthony T., Wilson, Louise C., Janecke, Andreas R., Hurles, Matthew E., Emmet, Warren, Gardiner, Brooke, Streubel, Berthold, Dopita, Belinda, Zankl, Andreas, Kayserili, Hülya, Scambler, Peter J., Brown, Matthew A., Beales, Philip L., Wicking, Carol, UK10K, Duncan, Emma L. and Mitchison, Hannah M. (2013) Mutations in the gene encoding IFT dynein complex component WDR34 cause Jeune asphyxiating thoracic dystrophy. American Journal of Human Genetics, 93 5: 932-944. doi:10.1016/j.ajhg.2013.10.003 51 1 6 Cited 6 times in Scopus6 2
Smit, Darren J., Gardiner, Brooke B. and Sturm, Richard A. (2007) Osteonectin downregulates E-cadherin, induces Osteopontin and Focal adhesion kinase activity stimulating an invasive melanoma phenotype. International Journal of Cancer, 121 12: 2653-2660. doi:10.1002/ijc.23039 61   24 Cited 29 times in Scopus29 0
Sturm, Richard A., Satyamoorthy, Kapaeth, Meier, Freidegund, Gardiner, Brooke B., Smit, Darren J., Vaidya, Bhavesh and Herlyn, Meenhard (2002) Osteonectin/SPARC induction by ectopic beta(3) integrin in human radial growth phase primary melanoma cells. Cancer Research, 62 1: 226-232. 96   44 Cited 47 times in Scopus47
Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Gingras, Marie-Claude, Muthuswamy, Lakshmi B., Johns, Amber L., Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Wu, Jianmin, Chang, David K., Cowley, Mark J., Gardiner, Brooke B., Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Pajic, Marina, Scarlett, Christopher J., Gill, Anthony J., Pinho, Andreia V., Rooman, Ilse, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Christina, Nones, Katia, Fink, J. Lynn, Christ, Angelika, Bruxner, Tim, Cloonan, Nicole, Kolle, Gabriel, Newell, Felicity, Pinese, Mark, Mead, R. Scott, Humphris, Jeremy L., Kaplan, Warren, Jones, Marc D., Colvin, Emily K., Nagrial, Adnan M., Humphrey, Emily S., Chou, Angela, Chin, Venessa T., Chantrill, Lorraine A., Mawson, Amanda, Samra, Jaswinder S., Kench, James G., Lovell, Jessica A., Daly, Roger J., Merrett, Neil D., Toon, Christopher, Epari, Krishna, Nguyen, Nam Q., Barbour, Andrew, Zeps, Nikolajs, Australian Pancreatic Cancer Genome Initiative, Pearson, John V. and Grimmond, Sean M. (2012) Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes. Nature, 491 7424: 399-405. doi:10.1038/nature11547 198   207 Cited 202 times in Scopus202 100
Suen, JY, Gardiner, B, Grimmond, S and Fairlie, DP (2010) Profiling gene expression induced by protease-activated receptor 2 (PAR2) activation in human kidney cells. PLoS One, 5 11: e13809-1-e13809-14. doi:10.1371/journal.pone.0013809 37   22 Cited 23 times in Scopus23 0
Dawson, Paul A., Huxley, S., Gardiner, B., Tran, T., McAuley, J. L., Grimmond, S. M., McGuckin, M. A. and Markovich, D. (2009) Reduced mucin sulfonation and impaired intestinal barrier function in the hyposulfataemic NaS1 null mouse. Gut, 58 7: 910-919. doi:10.1136/gut.2007.147595 82   31 Cited 32 times in Scopus32 0
Thiagarajan, Rathi D., Cloonan, Nicole, Gardiner, Brooke B., Mercer, Tim R., Kolle, Gabriel, Nourbaksh, Ehsan, Wani, Shivangi, Tang, Dave, Krishnan, Keerthana, Georgas, Kylie M., Rumballe, Bree A., Chiu, Han S., Steen, Jason A., Mattick, John S., Little, Melissa H. and Grimmond, Sean M. (2011) Refining transcriptional programs in kidney development by integration of deep RNA-sequencing and array-based spatial profiling. BMC Genomics, 12 441-1-441-16. doi:10.1186/1471-2164-12-441 50   11 Cited 9 times in Scopus9 1
Mercer, Tim R., Dinger, Marcel E., Bracken, Cameron P., Kolle, Gabriel, Szubert, Jan M., Korbie, Darren J., Askarian-Amiri, Marjan E., Gardiner, Brooke B., Goodall, Gregory J., Grimmond, Sean M. and Mattick, John S. (2010) Regulated post-transcriptional RNA cleavage diversifies the eukaryotic transcriptome. Genome Research, 20 12: 1639-1650. doi:10.1101/gr.112128.110 78   29 Cited 33 times in Scopus33 0
McInerney-Leo, Aideen M., Schmidts, Miriam, Cortés, Claudio R., Leo, Paul J., Gener, Blanca, Courtney, Andrew D., Gardiner, Brooke, Harris, Jessica A., Lu, Yeping, Marshall, Mhairi, Scrambler, Peter J., Beales, Philip L., Brown, Matthew A., Zankl, Andreas, Mitchison, Hannah M., Duncan, Emma L., Wicking, Carol and UK10K Consortium (2013) Short-rib polydactyly and Jeune Syndromes are caused by mutations in WDR60. American Journal of Human Genetics, 93 3: 515-523. doi:10.1016/j.ajhg.2013.06.022 58   6 Cited 6 times in Scopus6 4
Caruana, Georgina, Cullen-McEwen, Luise, Nelson, Amy L., Kostoulias, Xenia, Woods, Kyra, Gardiner, Brooke, Davis, Melissa J., Taylor, Darrin F., Teasdale, Rohan D., Grimmond, Sean M., Little, Melissa H. and Bertram, John F. (2006) Spatial gene expression in the T-stage mouse metanephros. Gene Expression Patterns, 6 8: 807-825. doi:10.1016/j.modgep.2006.02.001 109   19 Cited 22 times in Scopus22 0
Cloonan, Nicole, Forrest, Alistair R. R., Kolle, Gabriel, Gardiner, Brooke B. A., Faulkner, Geoffrey J., Brown, Mellissa K., Taylor, Darrin F ., Steptoe, Anita L., Wani, Shivangi, Bethel, Graeme, Robertson, Alan J., Perkins, Andrew C., Bruce, Stephen J., Clarence, C. Lee, Ranade, Swati S., Peckham, Heather E, Manning, Jonathan M, McKernan, Kevin J and Grimmond, Sean M (2008) Stem cell transcriptome profiling via massive-scale mRNA sequencing. Nature Methods, 5 7: 613-619. doi:10.1038/nmeth.1223 207   467 Cited 495 times in Scopus495 17
Dawson, P. A., Gardiner, B., Lee, S., Ku, and Markovich, D. (2005). Sulphate ions in mammalian physiology: lessons from sulphate transporter knock-out mice. In: S. Broer, Proceedings of the Australian Physiological Society. AuPS/ASB Canberra 2005 Meeting, Canberra Rydges Lakeside Hotel, (20-20). 27-30 September. 46  
Challen, G., Gardiner, B., Caruana, G., Kostoulias, X., Martinez, G., Crowe, M., Taylor, D. F., Bertram, J., Little, M. and Grimmond, S. M. (2005) Temporal and spatial transcriptional programs in murine kidney development. Physiological Genomics, 23 2: 159-171. doi:10.1152/physiolgenomics.00043.2005 101   42 Cited 47 times in Scopus47 0
Laslett, Andrew L., Grimmond, Sean, Gardiner, Brooke, Stamp, Lincon, Lin, Adelia, Hawes, Susan M, Wormald, Sam, Nikolic-Paterson, David, Haylock, David and Pera, Martin F. (2007) Transcriptional analysis of early lineage commitment in human embryonic stem cells. BMC Developmental Biology, 7 12: 1-18. doi:10.1186/1471-213X-7-12 65   55 Cited 60 times in Scopus60 0
Dawson, P. A., Gardiner, B., Grimmond, S. and Markovich, D. (2006) Transcriptional profile reveals altered hepatic lipid and cholesterol metabolism in hyposulfatemic NaS1 null mice. Physiological Genomics, 26 2: 116-124. doi:10.1152/physiolgenomics.00300.2005 45   14 Cited 15 times in Scopus15 0
Perkins, A. C., Bruce, S., Dinger, M., Gardiner, B., Steptoe, A., Burke, L., Mattick, J. S. and Grimmond, S. M. (2006). Transcription factors, non-coding RNAs and ES cell differentiation in vitro and in vivo. In: Transgenic Research. 7th Transgenic Technology Meeting (TT2007), Brisbane, Australia, (778-778). 12-14 February, 2007. doi:10.1007/s11248-006-9047-x 93   0 0
McInerney-Leo, Aideen M., Marshall, Mhairi S., Gardiner, Brooke, Benn, Diana E., McFarlane, Janelle, Robinson, Bruce G., Brown, Matthew A., Leo, Paul J., Clifton-Bligh, Roderick J. and Duncan, Emma L. (2014) Whole exome sequencing is an efficient and sensitive method for detection of germline mutations in patients with phaeochromcytomas and paragangliomas. Clinical Endocrinology, 80 1: 25-33. doi:10.1111/cen.12331 35   5 Cited 6 times in Scopus6 0
McInerney-Leo, Aideen, Harris, Jessica E., Leo, Paul, Marshall, Mhairi, Gardiner, Brooke, Kinning, Esther, Leong, Huey Yin, McKenzie, Fiona, Ong, PeiTee, Vodopiutz, Julia, Wicking, Carol A., Brown, Matthew A., Zanki, Andreas and Duncan, Emma (2014) Whole exome sequencing is an efficient, sensitive and specific method for determining the genetic cause of short-rib thoracic dystrophies. Clinical Genetics, . doi:10.1111/cge.12550 8   2
McInerney-Leo, Aideen M., Marshall, Mhairi S., Gardiner, Brooke, Coucke, Paul J., Van Laer, Lut, Loeys, Bart L., Summers, Kim M., Symoens, Sofie, West, Jennifer A., West, Malcolm J., Wordsworth, B. Paul, Zankl, Andreas, Leo, Paul J., Brown, Matthew A. and Duncan, Emma L. (2013) Whole exome sequencing is an efficient, sensitive and specific method of mutation detection in osteogenesis imperfecta and Marfan syndrome. BoneKEy Reports, 2 456: 1-9. doi:10.1038/bonekey.2013.190 42 2 0
Gardiner, M. R., Gongora, M., Gardiner, B., Grimmond, S. and Perkins, A. C. (2007). Zebrafish klf4 plays a global role in primitive erythropoiesis. In: Blood Cells, Molecules, and Diseases. 15th Conference on Hemoglobin Switching, Oxford, England, (169-169). 14-18 September 2006. doi:10.1016/j.bcmd.2006.10.113 99   0 0