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Sharman, M., Thomas, J.E., Skabo, S. and Holton, T.A. (2008) Abaca bunchy top virus, a new member of the genus Babuvirus (family Nanoviridae). Archives of Virology, 153 1: 135-147. doi:10.1007/s00705-007-1077-z 143   16 Cited 21 times in Scopus21 0
Candresse, Thierry, Lot, Herve, German-Retana, Sylvie, Krause-Sakate, Renate, Thomas, John, Souche, Sylvie, Delaunay, Thierry, Lanneau, Maryvonne and Le Gall, Olivier (2007) Analysis of the serological variability of Lettuce mosaic virus using monoclonal antibodies and surface plasmon resonance technology. Journal of General Virology, 88 9: 2605-2610. doi:10.1099/vir.0.82980-0 76   7 Cited 7 times in Scopus7 0
van Brunschot, S. L., Verhoeven, J. Th, J., Persley, D. M., Geering, A. D. W., Drenth, A. and Thomas, J. E. (2014) An outbreak of Potato spindle tuber viroid in tomato is linked to imported seed. European Journal of Plant Pathology, 139 1: 1-7. doi:10.1007/s10658-014-0379-8 111   0 Cited 1 times in Scopus1 0
Kraberger, Simona, Thomas, John E., Geering, Andrew D. W., Dayaram, Anisha, Stainton, Daisy, Hadfield, James, Walters, Matthew, Parmenter, Kathleen S., van Brunschot, Sharon, Collings, David A., Martin, Darren P. and Varsani, Arvind (2012) Australian monocot-infecting mastrevirus diversity rivals that in Africa. Virus Research, 169 1: 127-136. doi:10.1016/j.virusres.2012.07.018 34   10 Cited 8 times in Scopus8 0
Geering, Andrew D. W., Olszewski, Neil E., Harper, Glyn, Lockhart, Benham E. L., Hull, Roger and Thomas, John E. (2005) Banana contains a diverse array of endogenous badnaviruses. Journal of General Virology, 86 2: 511-520. doi:10.1099/vir.0.80261-0 54   53 Cited 61 times in Scopus61 3
Geering, A. D. W. and Thomas, J. E. (1999) Characterisation of a virus from Australia that is closely related to papaya mosaic potexvirus. Archives of Virology, 144 3: 577-592. doi:10.1007/s007050050526 31   19 Cited 20 times in Scopus20 0
Geering, A. D. W., Pooggin, M. M., Olszewski, N. E., Lockhart, B. E. L. and Thomas, J. E. (2005) Characterisation of Banana streak Mysore virus and evidence that its DNA is integrated in the B genome of cultivated Musa. Archives of Virology, 150 4: 787-796. doi:10.1007/s00705-004-0471-z 50   34 Cited 37 times in Scopus37 0
Geering, Andrew D. W., Parry, Judith N. and Thomas, John E. (2011) Complete genome sequence of a novel badnavirus, banana streak IM virus. Archives of Virology, 156 4: 733-737. doi:10.1007/s00705-011-0946-7 54   7 Cited 7 times in Scopus7 0
Fletcher, J. D., Lister, R. A., Clover, G. R. G., Horner, M. B., Thomas, J. E., van der Vlugt, R. A. A. and MacDiarmid, R. M. (2009) Development of a New Zealand database of plant virus and virus-like organisms. Australasian Plant Pathology, 38 6: 571-575. doi:10.1071/AP09041 34   1 Cited 1 times in Scopus1 0
GambleyCF, GeeringADW and ThomasJE (2008) Development of an immunomagnetic capture-reverse transcriptase-PCR assay for three pineapple ampeloviruses. Journal of Virological Methods, 155 2: 187-192. doi:10.1016/j.jviromet.2008.10.006 71   3 Cited 3 times in Scopus3 0
Sharman, Murray, Persley, Denis M. and Thomas, John E. (2009) Distribution in Australia and Seed Transmission of Tobacco streak virus in Parthenium hysterophorus. Plant Disease, 93 7: 708-712. doi:10.1094/PDIS-93-7-0708 115   5 Cited 6 times in Scopus6 0
Stainton, Daisy, Kraberger, Simona, Walters, Matthew, Wiltshire, Elizabeth J., Rosario, Karyna, Halafihi, Mana’ia, Lolohea, Samiuela, Katoa, Ika, Faitua, Tu’amelie H., Aholelei, Waikato, Taufa, Luseane, Thomas, John E., Collings, David A., Martin, Darren P. and Varsani, Arvind (2012) Evidence of inter-component recombination, intra-component recombination and reassortment in banana bunchy top virus. Journal of General Virology, 93 5: 1103-1119. doi:10.1099/vir.0.040337-0 61   12 Cited 14 times in Scopus14 0
Kraberger, Simona, Harkins, Gordon W., Kumari, Safaa G., Thomas, John E., Schwinghamer, Mark W., Sharman, Murray, Collings, David A., Briddon, Rob W., Martin, Darren P. and Varsani, Arvind (2013) Evidence that dicot-infecting mastreviruses are particularly prone to inter-species recombination and have likely been circulating in Australia for longer than in Africa and the Middle East. Virology, 444 1-2: 282-291. doi:10.1016/j.virol.2013.06.024 30   5 Cited 5 times in Scopus5 0
Schwinghamer, M. W., Thomas, J. E., Parry, J. N., Schilg, M. A. and Dann, E. K. (2007) First record of natural infection of chickpea by Turnip mosaic virus. Australasian Plant Disease Notes, 2 1: 41-43. doi:10.1071/DN07020 26   0
Davis, R. I., Mu, L, Maireroa, N, Wigmore, W. J., Grisoni, M, Bateson, M. F. and Thomas, J. E. (2005) First records of the papaya strain of Papaya ringspot virus (PRSV-P) in French Polynesia and the Cook Islands. Australasian Plant Pathology, 34 1: 125-126. doi:10.1071/AP04094 67   3 Cited 3 times in Scopus3 0
Thomas, John E. and Steele, Visnja (2011) First report of Panicum mosaic virus in buffalo grass (Stenotaphrum secundatum) from Australia. Australasian Plant Disease Notes, 6 1: 16-17. doi:10.1007/s13314-011-0005-y 71   Cited 0 times in Scopus0 0
van Brunschot, S. L., Persley, D. M., Roberts, A. and Thomas, J. E. (2014) First report of pospiviroids infecting ornamental plants in Australia: Potato spindle tuber viroid in Solanum laxum (synonym S. jasminoides) and Citrus exocortis viroid in Petunia spp.. New Disease Reports, 29 3: . doi:10.5197/j.2044-0588.2014.029.003 65   0
Sharman, Murray, Constable, Fiona, Perera, Ruvinda and Thomas, John E. (2011) First report of Strawberry necrotic shock virus infecting strawberry (Fragaria vesca) from Australia. Australasian Plant Disease Notes, 6 1: 54-56. doi:10.1007/s13314-011-0018-6 71   Cited 3 times in Scopus3 0
Thomas, JE, Schwinghamer, MW, Parry, JN, Sharman, M, Schilg, MA and Dann, EK (2004) First report of Tomato spotted wilt virus in chickpea (Cicer arietinum) in Australia. Australasian Plant Pathology, 33 4: 597-599. doi:10.1071/AP04065 17   7 Cited 8 times in Scopus8 0
Gambley, C.F., Thomas, J.E., Persley, D.M. and Hall, B.H. (2010) First Report of Tomato torrado virus on Tomato from Australia.. Plant Disease, 94 4: 486-486. doi:10.1094/PDIS-94-4-0486A 53   6 Cited 0 times in Scopus0 0
Sharman, M. and Thomas, J. E. (2013) Genetic diversity of subgroup 1 ilarviruses from eastern Australia. Archives of Virology, 158 8: 1637-1647. doi:10.1007/s00705-013-1628-4 41   0 Cited 1 times in Scopus1 0
Dayaram, Anisha, Potter, Kristen A., Moline, Angela B., Rosenstein, Dana Drake, Marinov, Milen, Thomas, John E., Breitbart, Mya, Rosario, Karyna, Argüello-Astorga, Gerardo R. and Varsani, Arvind (2013) High global diversity of cycloviruses amongst dragonflies. Journal of General Virology, 94 Pt. 8: 1827-1840. doi:10.1099/vir.0.052654-0 17   14 Cited 14 times in Scopus14 2
GambleyCF, GeeringADW, SteeleV and ThomasJE (2008) Identification of viral and non-viral reverse transcribing elements in pineapple ( Ananas comosus ), including members of two new badnavirus species. Archives of Virology, 153 8: 1599-1604. doi:10.1007/s00705-008-0160-4 41   10 Cited 10 times in Scopus10 0
Schwinghamer, M., Thomas, J. and Fletcher, M. J. (2011). Mastreviruses. In Compendium of chickpea and lentil diseases and pests (pp. 86-87) St Paul, MN, USA: APS Press. 85 2
Schwinghamer, M. W., Thomas, J. E., Schilg, M. A., Parry, J. N., Dann, E. K., Moore, K. J. and Kumari, S. G. (2010) Mastreviruses in chickpea (Cicer arietinum) and other dicotyledonous crops and weeds in Queensland and northern New South Wales, Australia. Australasian Plant Pathology, 39 6: 551-561. doi:10.1071/AP10032 78   9 Cited 10 times in Scopus10 0
Gambley, CF and Thomas, JE (2001) Molecular characterisation of Banana mild mosaic virus, a new filamentous virus in Musa spp. - Brief report. Archives of Virology, 146 7: 1369-1379. doi:10.1007/s007050170097 42   10 Cited 14 times in Scopus14 0
Hadfield, James, Thomas, John E., Schwinghamer, Mark W., Kraberger, Simona, Stainton, Daisy, Dayaram, Anisha, Parry, Judith N., Pande, Daniel, Martin, Darren P. and Varsani, Arvind (2012) Molecular characterisation of dicot-infecting mastreviruses from Australia. Virus Research, 166 1-2: 13-22. doi:10.1016/j.virusres.2012.02.024 39   11 Cited 12 times in Scopus12 0
Kraberger, Simona, Kumari, Safaa G., Hamed, Abdelmagid A., Gronenborn, Bruno, Thomas, John E., Sharman, Murray, Harkins, Gordon W., Muhire, Brejnev M., Martin, Darren P. and Varsani, Arvind (2015) Molecular diversity of Chickpea chlorotic dwarf virus in Sudan: high rates of intra-species recombination - a driving force in the emergence of new strains. Infection, Genetics and Evolution, 29 203-215. doi:10.1016/j.meegid.2014.11.024 17   0 Cited 1 times in Scopus1 0
van Brunschot, S. L., Gambley, C. F., De Barro, P. J., Grams, R., Thomas, J. E., Henderson, J., Drenth, A. and Geering, A. D. W. (2013) Panel of real-time PCRs for the multiplexed detection of two tomato-infecting begomoviruses and their cognate whitefly vector species. Plant Pathology, 62 5: 1132-1146. doi:10.1111/ppa.12033 49   1 Cited 3 times in Scopus3 0
Geering, Andrew D. W., Thomas, John E., Holton, Timothy, Hadfield, James and Varsani, Arvind (2012) Paspalum striate mosaic virus: An Australian mastrevirus from Paspalum dilatatum. Archives of Virology, 157 1: 193-197. doi:10.1007/s00705-011-1129-2 46   3 Cited 4 times in Scopus4 0
Yasaka, Ryosuke, Ohba, Kiho, Schwinghame, Mark W., Fletcher, John, Ochoa-Corona, Francisco M., Thomas, John E., Ho, Simon Y. W., Gibbs, Adrian J. and Ohshima, Kazusato (2015) Phylodynamic evidence of the migration of turnip mosaic potyvirus from Europe to Australia and New Zealand. Journal of General Virology, 96 3: 701-713. doi:10.1099/jgv.0.000007 19   Cited 0 times in Scopus0 1
Thomas, JE and Dietzgen, RG (1991) Purification, Characterization and Serological Detection of Virus-Like Particles Associated with Banana Bunchy Top Disease in Australia. Journal of General Virology, 72 217-224. doi:10.1099/0022-1317-72-2-217 20   50 3
Gambley, C. F., Miles, A. K., Ramsden, M., Doogan, V., Thomas, J. E., Parmenter, K. and Whittle, P. J. L. (2009) The distribution and spread of citrus canker in Emerald, Australia. Australasian Plant Pathology, 38 6: 547-557. doi:10.1071/AP09043 43   8 Cited 9 times in Scopus9 0
Harper, G., Hart, D., Moult, S., Hull, R., Geering, A. and Thomas, J. (2005) The diversity of Banana streak virus isolates in Uganda. Archives of Virology, 150 12: 2407-2420. doi:10.1007/s00705-005-0610-1 26   39 Cited 40 times in Scopus40 0
GambleyCF, SteeleV, GeeringADW and ThomasJE (2008) The genetic diversity of ampeloviruses in Australian pineapples and their association with mealybug wilt disease. Australasian Plant Pathology, 37 2: 95-105. doi:10.1071/AP07096 87   14 Cited 13 times in Scopus13 0
Van Brunschot, S. L., Persley, D. M., Geering, A. D. W., Campbell, P. R. and Thomas, J. E. (2010) Tomato yellow leaf curl virus in Australia: distribution, detection and discovery of naturally occurring defective DNA molecules. Australasian Plant Pathology, 39 5: 412-423. doi:10.1071/AP10083 204   6 Cited 6 times in Scopus6 0
Persley, D. M., Thomas, J. E. and Sharman, M. (2006) Tospoviruses - an Australian perspective. Australasian Plant Pathology, 35 2: 161-180. doi:10.1071/AP06015 66   20 Cited 24 times in Scopus24 0
Thomas, J. E., Parry, J. N., Schwinghamer, M. W. and Dann, E. K. (2010) Two novel mastreviruses from chickpea (Cicer arietinum) in Australia. Archives of Virology, 155 11: 1777-1788. doi:10.1007/s00705-010-0763-4 52 1 19 Cited 21 times in Scopus21 0