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Whiley, David M. and Sloots, Theo P. (2005) A 5 '-nuclease real-time reverse transcriptase-polymerase chain reaction assay for the detection of a broad range of influenza A subtypes, including H5N1. Diagnostic Microbiology and Infectious Disease, 53 4: 335-337. doi:10.1016/j.diagmicrobio.2005.08.002 154   36 Cited 35 times in Scopus35 0
Chang, Anne B., Clark , Ronald, Sloots, Theo P., Stone, David G., Petsky, Helen L., Thearle, Donna, Champion, Anita A., Wheeler, Coralie and Acworth, Jason P. (2008) A 5- verus 3- day course of oral corticosteroids for children with asthma exacerbations who are not hospitalised: a randomized control trial. Medical Journal of Australia, 189 6: 306-310. 85   14 Cited 16 times in Scopus16
Lum, G., Freeman, K., Nguyen, N. L., Limnios, E. A., Tabrizi, S. M., Carter, I., Chambers, I. W., Sloots, T. P., Whiley, D. M., Garland, S. M. and Tapsall, J. (2005) A cluster of culture positive gonococcal infections but with false negative cppB gene based PCR. Sexually Transmitted Infections, 81 5: 400-402. doi:10.1136/sti.2004.013805 121   25 Cited 24 times in Scopus24 0
Syrmis, Melanie W., Kidd, Timothy J., Moser, Ralf J., Ramsay, Kay A., Gibson, Kristen M., Anuj, Snehal, Bell, Scott C., Wainwright, Claire E., Grimwood, Keith, Nissen, Michael, Sloots, Theo P. and Whiley, David M. (2014) A comparison of two informative SNP-based strategies for typing Pseudomonas aeruginosa isolates from patients with cystic fibrosis. BMC Infectious Diseases, 14 1: 307.1-307.8. doi:10.1186/1471-2334-14-307 33   0 Cited 0 times in Scopus0 0
Nissen, M., McEniery, J., Delbridge, G., Pearn, John H., Sloots, T. and Whight, C. (1995) Acute hypertrophic cardiomyopathy possibly associated with Mycoplasma pneumoniae infection. Pediatric Infectious Disease Journal, 14 1: 74-76. 180   4
Goire, Namraj, Nissen, Michael D., LeCornec, Genevera M., Sloots, Theo P. and Whiley, David, M. (2008) A duplex Neisseria gonorrhoeae real-time polymerase chain reaction assay targeting the gonoccoccal porA pseudogene and multicopy opa genes. Diagnostic Microbiology and Infectious Disease, 61 1: 6-12. doi:10.1016/j.diagmicrobio.2007.12.007 37   25 Cited 25 times in Scopus25 0
Sloots, T. P., Mackay, I. M., Jacob, K.C., Bialasiewicz, S. and Nissen, M. D. (2006). A four year study of human metapneumovirus in Australia. In: Australian Society for Microbiology Annual Scientific Meeting, Gold Coast, Australia,, (). 2-6 July 2006. 54  
Whiley, David M., Jacobsson, Susanne, Tapsall, John W., Nissen, Michael D., Sloots, Theo P. and Unemo, Magnus (2010) Alterations of the pilQ gene in Neisseria gonorrhoeae are unlikely contributors to decreased susceptibility to ceftriaxone and cefixime in clinical gonococcal strains. Journal of Antimicrobial Chemotherapy, 65 12: 2543-2547. doi:10.1093/jac/dkq377 60   17 Cited 16 times in Scopus16 0
Trembizki, E., Lahra, M., Stevens, K., Freeman, K., Hogan, T., Hogg, G., Lawrence, A., Limnios, A., Pearson, J., Smith, H., Nissen, M., Sloots, T. and Whiley, D.M. (2013) A national quality assurance survey of Neisseria gonorrhoeae testing. Journal of Medical Microbiology, 63 PART 1: 45-49. doi:10.1099/jmm.0.065094-0 31   3 Cited 5 times in Scopus5 0
Whiley, D. M., Buda, P. J., Bayliss, J., Cover, L., Bates, J. and Sloots, T. P. (2004) A new confirmatory Neisseria gonorrhoeae real-time PCR assay targeting the porA pseudogene. European Journal of Clinical Microbiology & Infectious Diseases, 23 9: 705-710. doi:10.1007/s10096-004-1170-0 227   34 Cited 36 times in Scopus36 0
Wang, C. Y. T., Greer, R. M., Delwart, E., Sloots, T. P. and Mackay, I. M. (2012) A newly designed real-time RT-PCR for SAFV detects SAFV-2 and SAFV-3 in the respiratory tracts of ill children during 2011. Journal of Clinical Virology, 55 2: 173-176. doi:10.1016/j.jcv.2012.06.023 57   2 Cited 2 times in Scopus2 0
McErlean P., Shackelton L., Nissen, M. D., Sloots, T. P. and Mackay, Ian M. (2006). A newly identified human rhinovirus present in young children with bronchiolitis. In: Proceedings : IX International Symposium on Respiratory Viral Infections. IX International Symposium on Respiratory Viral Infections, Causeway Bay, Hong Kong, (). 3-6 March 2007. 121  
Bialasiewicz, Seweryn, Whiley, David M., Lambert, Stephen B., Wang, David, Nissen, Michael D. and Sloots, Theo P. (2007) A newly reported human polyomavirus, KI virus, is present in the respiratory tract of Australian children. Journal of Clinical Virology, 40 1: 15-18. doi:10.1016/j.jcv.2007.07.001 169   36 Cited 39 times in Scopus39 0
Barnard, R., Lai, R., Pearson, D., Phua, Z. Y., Whiley, D., Sloots, T. and Barnett, G. (2009). A new multiplexable, quantitative, real-time system for detection of nucleic acids. In: Mike L. Taussig, New Biotechnology. Abstracts of the 14th European Congress on Biotechnology. 14th European Congress on Biotechnology, Barcelona, Spain, (S17-S18). 13-16 September 2009. doi:10.1016/j.nbt.2009.06.044 77   0 0
Liang, Fang, Arora, Neetika, Zhang, Kang Liang, Yeh, David Che Cheng, Lai, Richard, Pearson, Darnley, Barnett, Graeme, Whiley, David, Sloots, Theo, Corrie, Simon R. and Barnard, Ross T. (2013). A new, multiplex, quantitative real-time polymerase chain reaction system for nucleic acid detection and quantification. In Dmitry M. Kolpashchikov and Yulia V. Gerasimova (Ed.), Nucleic acid detection: methods and protocols (pp. 51-68) New York, NY, United States: Humana Press. doi:10.1007/978-1-62703-535-4_4 112   1 Cited 1 times in Scopus1 0
Goire, Namraj, Kattenbelt, Jacqueline A., Gould, Allan R., Nissen, Michael D., Sloots, Theo P. and Whiley, David (2009) An example of competitive inhibition in a monoplex real-time PCR as a cause of reduced fluorescent signal response. Pathology, 41 6: 607-609. doi:10.1080/00313020903071488 148   0 Cited 0 times in Scopus0 0
Wang, C. Y. T., Arden, K. E., Greer, R., Sloots, T. P. and Mackay, I. M. (2012) A novel duplex real-time PCR for HPIV-4 detects co-circulation of both viral subtypes among ill children during 2008. Journal of Clinical Virology, 54 1: 83-85. doi:10.1016/j.jcv.2012.01.013 74   5 Cited 5 times in Scopus5 0
Rockett, Rebecca J., Bialasiewicz, Seweryn, Whiley, David M., Bletchly, Cheryl, Faux, Cassandra E., Lambert, Stephen B., Nimmo, Graeme R., Nissen, Michael D. and Sloots, Theodorus P. (2009) A novel duplex real-time reverse transcription PCR Assay for the detection of influenza A and the novel influenza A(H1N1)strain.. Viruses, 1 3: 1204-1208. doi:10.3390/v1031204 92   2 Cited 2 times in Scopus2 0
Bialasiewicz, S., Whiley, D. M., Buhrer-Skinner, M., Bautista, C., Barker, K., Aitken, S., Gordon, R., Muller, R., Lambert, S. B., Debattista, J., Nissen, M. D. and Sloots, T. P. (2009) A novel gel-based method for self collection and ambient temperature postal transport of urine for PCR detection of Chlamydia trachomatis.. Sexually Transmitted Infections, 85 2: 102-105. doi:10.1136/sti.2008.032607 88   18 Cited 17 times in Scopus17 0
Chang, Anne B., Grimwood, Keith, Robertson, Colin F., Wilson, Andrew C., van Asperen, Peter P., O'Grady, Kerry-Ann F., Sloots, Theo P., Torzillo, Paul J., Bailey, Emily J., Mccallum, Gabrielle B., Masters, Ian B., Byrnes, Catherine .A, Buntain, Helen M., Morris, Peter S., Mackay, Ian M. and Chatfield, Mark D. (2012) Antibiotics for bronchiectasis exacerbations in children: Rationale and study protocol for a randomised placebo-controlled trial. Trials, 13 156: 156-1-156-9. doi:10.1186/1745-6215-13-156 95   3 Cited 4 times in Scopus4 1
Tapsall, John, David Whiley and Sloots, Theodorus P. (2006) Applications of molecular testing in clinical laboratories for the diagnosis and control of gonorrhea. Future Microbiology, 1 3: 317-324. doi:10.2217/17460913.1.3.317 113   10 Cited 12 times in Scopus12 0
Whiley, David M., LeCornec, Genevera M., Mackay, Ian M., Siebert, David J. and Sloots, Theo P. (2002) A real-time PCR assay for the detection of Neisseria gonorrhoeae by LightCycler. Diagnostic Microbiology And Infectious Disease, 42 2: 85-89. doi:10.1016/S0732-8893(01)00326-1 132   22 Cited 24 times in Scopus24 0
Whiley, David M., Buda, Philip P., Freeman, Kevin, Prattle, Neville I., Bates, John and Sloots, Theo P. (2005) A real-time PCR assay for the detection of Neisseria gonorrhoeae in genital and extragenital specimens. Diagnostic Microbiology and Infectious Disease, 52 1: 1-5. doi:10.1016/j.diagmicrobio.2004.12.011 73   20 Cited 25 times in Scopus25 0
Rockett, Rebecca J., Tozer, Sarah J., Peatey, Chris, Bialasiewicz, Seweryn, Whiley, David M., Nissen, Michael D., Trenholme, Katharine, Mc Carthy, James S. and Sloots, Theo P. (2011) A real-time, quantitative PCR method using hydrolysis probes for the monitoring of Plasmodium falciparum load in experimentally infected human volunteers. Malaria Journal, 10 48: 48-1-48-6. doi:10.1186/1475-2875-10-48 132   8 Cited 10 times in Scopus10 0
Alsaleh, A.N., Grimwood, K., Sloots, T.P. and Whiley, D.M. (2014) A retrospective performance evaluation of an adenovirus real-time PCR assay. Journal of Medical Virology, 86 5: 795-801. doi:10.1002/jmv.23844 22   0 Cited 0 times in Scopus0 0
Syrmis, Melanie W., Whiley, David M., Thomas, Marion, Mackay, Ian M., Williamson, Jeanette, Siebert, David J., Nissen, Michael D. and Sloots, Theo P. (2004) A sensitive, specific, and cost-effective multiplex reverse transcriptase-PCR assay for the detection of seven common respiratory viruses in respiratory samples. Journal of Molecular Diagnostics, 6 2: 125-131. doi:10.1016/S1525-1578(10)60500-4 112   113 Cited 123 times in Scopus123 0
Whiley, David M., Faux, Cassandra E., Bialasiewicz, Seweryn, Gould, Allan R., Lambert, Stephen B., Nissen, Michael D. and Sloots, Theo P. (2010) A simple approach for preparing real-time PCR positive reaction controls for rare or emerging viruses. Journal of Clinical Virology, 48 3: 193-197. doi:10.1016/j.jcv.2010.03.022 72   5 Cited 5 times in Scopus5 0
McCallum G.B., Morris P.S., Chatfield M.D., Maclennan C., White A.V., Sloots T.P., Mackay I.M. and Chang A.B. (2013) A Single Dose of Azithromycin Does Not Improve Clinical Outcomes of Children Hospitalised with Bronchiolitis: A Randomised, Placebo-Controlled Trial. PLoS ONE, 8 9: 1-9. doi:10.1371/journal.pone.0074316 31   2 Cited 2 times in Scopus2 2
Bialasiewicz, S., Cho, Y., Rockett, R., Preston, J., Wood, S., Fleming, S., Shepherd, B., Barraclough, K., Sloots, T. P. and Isbel, N. (2013) Association of micropapillary urothelial carcinoma of the bladder and BK viruria in kidney transplant recipients. Transplant Infectious Disease, 15 3: 283-289. doi:10.1111/tid.12072 41   4 Cited 4 times in Scopus4 0
Cox, Hannah C., Jacob, Kevin, Whiley, David M., Bletchly, Cheryl, Nimmo, Graeme R., Nissen, Michael D. and Sloots, Theo P. (2013) Bordetella holmesii and pertussis diagnosis: authors' reply. Pathology, 45 5: 532-532. doi:10.1097/PAT.0b013e3283639c0d 29   0 Cited 0 times in Scopus0 1
Chang, Anne B., Grimwood, Keith, Wilson, Andrew C., van Asperen, Peter P., Byrnes, Catherine A., O'Grady, Kerry-Ann F., Sloots, Theo P., Robertson, Colin F., Torzillo, Paul J., McCallum, Gabrielle B., Masters, Ian B., Buntain, Helen M., Mackay, Ian M., Ungerer, Jacobus, Tuppin, Joanne and Morris, Peter S. (2013) Bronchiectasis exacerbation study on azithromycin and amoxycillin-clavulanate for respiratory exacerbations in children (BEST-2): study protocol for a randomized controlled trial. Trials, 14 1-10. doi:10.1186/1745-6215-14-53 64   3 Cited 3 times in Scopus3 1
Mackay, I. M., Arden, K. E., Nissen, M. D. and Sloots, T. P. (2007). Challenges Facing Real-time PCR Characterization of Acute Respiratory Tract Infections.. In Mackay, I.M. (Ed.), Real-Time PCR in Microbiology from Diagnosis to Characterization. 1 ed. (pp. 269-318) United Kingdom: Horizon Press - Calister Academic Press. 113  
McErlean, P., Shackelton, L. A., Lambert, S. B., Nissen, M. D., Sloots, T. P. and Mackay, I. M. (2007) Characterisation of a newly identified human rhinovirus, HRV-QPM, discovered in infants with bronchiolitis. Journal of Clinical Virology, 39 2: 67-75. doi:10.1016/j.jcv.2007.03.012 103   118 Cited 123 times in Scopus123 0
Drescher, B. J., Chang, A. B., Phillips, N., Acworth, J., Marchant, J. M., Sloots, T. and O'Grady, K. F. (2013). Chronic cough following acute respiratory illness in children. In: Abstracts of the Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2013 Annual Scientific Meetings. Thoracic Society of Australia & New Zealand and the Australian & New Zealand Society of Respiratory Science 2013 Annual Scientific Meetings, Darwin, NT, Australia, (76-76). 22-27 March 2013. doi:10.1111/resp.12046 22   0 0
Mackay, I. M., Wang, C. Y. T. and Sloots, T. P. (2013) Circularizing picornavirus genomes to rapidly obtain terminal sequence. Journal of Clinical Virology, 58 1: 286-287. doi:10.1016/j.jcv.2013.04.020 32   0 Cited 0 times in Scopus0 0
Whiley, D. M. and Sloots, T. P. (2006). Clinical Virology. In M. Tevfik Dorak (Ed.), Real-Time PCR 1 ed. (pp. 231-276) UK: Taylor & Francis. 60  
O'Carroll, M. R., Syrmis, M. W., Wainwright, C. E., Greer, R. M., Mitchell, P., Coulter, C., Sloots, T. P., Nissen, M. D. and Bell, S. C. (2004) Clonal strains of Pseudomonas aeruginosa in paediatric and adult cystic fibrosis units. European Respiratory Journal, 24 1: 101-106. doi:10.1183/09031936.04.00122903 94   60 Cited 65 times in Scopus65 0
Mackay, Ian M., Arden, Katherine E., Speicher, David J., O'Neil, Nicholas T., McErlean, Peter K., Greer, Ristan M., Nissen, Michael D. and Sloots, Theo P. (2012) Co-circulation of four human Coronaviruses (HCoVs) in Queensland children with acute respiratory tract illnesses in 2004. Viruses, 4 4: 637-653. doi:10.3390/v4040637 85 1 6 Cited 7 times in Scopus7 0
Mackay, Ian M., Gardam, Tim, Arden, Katherine E., McHardy, Suzi, Whiley, David M., Crisante, Erin and Sloots, Theo P. (2003) Co-detection and discrimination of six human herpesviruses by multiplex PCR-ELAHA. Journal of Clinical Virology, 28 3: 291-302. doi:10.1016/S1386-6532(03)00072-6 122   9 Cited 6 times in Scopus6 0
Lambert, Stephen B., Allen, Kelly M., Druce, Julian D., Birch, Chris J., Mackay, Ian M., Carlin, John B., Carapetis, Jonathan R., Sloots, Theo P., Nissen, Michael D. and Nolan, Terence M. (2007) Community epidemiology of human Metapneumovirus, human Coronavirus NL63, and other respiratory viruses in healthy preshcool-aged children using parent-collected specimens. Pediatrics, 120 4: e929-e937. doi:10.1542/peds.2006-3703 110   45 Cited 51 times in Scopus51 0
Mackay, Ian M., Lambert, Stephen B., Faux, Cassandra E., Arden, Katherine E., Nissen, Michael D., Sloots, Theo P. and Nolan, Terence M. (2013) Community-wide, contemporaneous circulation of a broad spectrum of human rhinoviruses in healthy Australian preschool-aged children during a 12-month period. Journal of Infectious Diseases, 207 9: 1433-1441. doi:10.1093/infdis/jis476 30   6 Cited 9 times in Scopus9 1
Lambert, Stephen B., Whiley, David M., O'Neill, Nicholas T., Andrews, Emily C., Canavan, Fiona M., Bletchly, Cheryl, Siebert, David J., Sloots, Theo P. and Nissen, Michael D. (2008) Comparing nose-throat swabs and nasopharyngeal aspirates collected from children with symptoms for respiratory virus identification using real-time polymerase chain reaction. Pediatrics, 122 3: e615-e620. doi:10.1542/peds.2008-0691 88   52 Cited 57 times in Scopus57 0
Syrmis, M. W., Moser, R. J., Whiley, D. M., Vaska, V., Coombs, G. W., Nissen, M. D., Sloots, T. P. and Nimmo, G. R. (2011) Comparison of a multiplexed MassARRAY system with real-time allele-specific PCR technology for genotyping of methicillin-resistant Staphylococcus aureus. Clinical Microbiology and Infection, 17 12: 1804-1810. doi:10.1111/j.1469-0691.2011.03521.x 89   14 Cited 20 times in Scopus20 1
Ye, S., Lambert, S.B., Grimwood, K., Roczo-Farkas, S., Nimmo, G.R., Sloots, T.P., Kirkwood, C.D. and Whiley, D.M. (2015) Comparison of test specificities of commercial antigen-based assays and in-house PCR methods for detection of rotavirus in stool specimens. Journal of Clinical Microbiology, 53 1: 295-297. doi:10.1128/JCM.02251-14 10   0 Cited 0 times in Scopus0 0
Whiley, David M. and Sloots, Theo P. (2005) Comparison of three in-house multiplex PCR assays for the detection of Neisseria gonorrhoeae and Chlamydia trachomatis using real-time and conventional detection methodologies. Pathology, 37 5: 364-370. doi:10.1080/00313020500254552 204   15 Cited 17 times in Scopus17 0
Wainwright, C. E., France, M. W., O'Rourke, P., Anuj, S., Kidd, T. J., Nissen, M. D., Sloots, T. P., Coulter, C., Ristovski, Z., Hargreaves, M., Rose, B. R., Harbour, C., Bell, SC and Fennelly, KP (2009) Cough-generated aerosols of Pseudomonas aeruginosa and other Gram-negative bacteria from patients with cystic fibrosis.. Thorax, 64 11: 926-931. doi:10.1136/thx.2008.112466 91   33 Cited 34 times in Scopus34 2
Tapsall, J. W., Limnios, E. A., Nguyen, N. L., Carter, I., Lum, G., Freeman, K., Tabrizi, S. N., Garland, S. M., Whiley, D. M., Sloots, T. P. and Chambers, I. W. (2005) Cryptic-plasmid-free gonococci may contribute to failure of cppB gene-based assays to confirm results of BD ProbeTEC PCR for identification of Neisseria gonorrhoeae. Journal of Clinical Microbiology, 43 4: 2036-2037. doi:10.1128/JCM.43.4.2036-2037.2005 60   13 Cited 12 times in Scopus12 0
Herd, KA, Mahalingam, S, Mackay, IM, Nissen, M, Sloots, TP and Tindle, RW (2006) Cytotoxic T-lymphocyte epitope vaccination protects against human metapneumovirus infection and disease in mice. Journal of Virology, 80 4: 2034-2044. doi:10.1128/JVI.80.4.2034-2044.2006 78   31 Cited 33 times in Scopus33 0
Whiley, David M., Mackay, Ian M., Syrmis, Melanie W., Witt, Michael J. and Sloots, Theo P. (2004) Detection and differentiation of herpes simplex virus types 1 and 2 by a duplex LightCycler PCR that incorporates an internal control PCR reaction. Journal of Clinical Virology, 30 1: 32-38. doi:10.1016/j.jcv.2003.08.003 124   19 Cited 24 times in Scopus24 0
Whiley, David M., Mackay, Ian M. and Sloots, Theo P. (2001) Detection and differentiation of human polyomaviruses JC and BK by LightCycler PCR. Journal of Clinical Microbiology, 39 12: 4357-4361. doi:10.1128/JCM.39.12.4357-4361.2001 84   60 Cited 72 times in Scopus72 0

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