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Renton, M., Hanan, J. S. and Burrage, K. (2004). A canonical toolkit for modelling plant function. In: C. Godin and et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (226-230). 7-11 June, 2004. 209  
Cici, S-Zahra-Hosseini, Adkins, Steve and Hanan, Jim (2008) A canopy architectural model to study the competitive ability of chickpea with sowthistle. Annals of Botany, 101 9: 1311-1318. 228   5 Cited 7 times in Scopus7
Dorr, G. J., Noller, B N, Hewitt, A J, Hanan, J S and Adkins, S W (2006). A decision-making tool to minimise environmental and public health risk of pesticide application. In: , Towards a Healthier Queensland through Research and Innovation. 6th Annual Health and Medical Research conference of Queensland, Hilton Hotel, Brisbane, (59-59). 23-24 November 2006. 87  
Cieslak, M., Seleznyova, A.N. and Hanan, J. (2010). A functional-structural kiwifruit vine model. In: B. Li, M. Jaeger and Y. Guo, The Third International Symposium on Plant Growth Modeling Simulation, Visualization and Applications. Plant Growth Modelling and Applicaitions 2009, Beijing, China, (206-213). 9-13 November, 2009. 86 4 Cited 1 times in Scopus1
Cieslak, Mikolaj, Seleznyova, Alla N. and Hanan, Jim (2011) A functional-structural kiwifruit vine model integrating architecture, carbon dynamics, and effects of the environment. Annals of Botany, 107 5: 747-764. 60   6 Cited 9 times in Scopus9
Han, Liqi, Gresshoff, Peter M. and Hanan, Jim (2011) A functional-structural modelling approach to autoregulation of nodulation. Annals of Botany, 107 5: 855-863. 56   2 Cited 2 times in Scopus2
Duczmal, Katherine, Robinson, Peter and Hanan, Jim (2005). Agent-based virtual insects. In: Robert Bridle, Simon Thornton and Arun Vishwanath, Proceedings of the Australian Undergraduate Students’ Computing Conference 2005. Proceedings of the Australian Undergraduate Students’ Computing Conference 2005, Canberra, Australia, (1-8). 28-29 November, 2005. 46  
Thornby, D. F. and Hanan, J. S. (2004). A modelling exploration of branch extension, defoliation responses, and carbohydrate physiology in cotton (Gossypium hirsutum L.). In: C. Godin and et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (319-322). 7-11 June, 2004. 45  
Song, Youhong, Birch, Colin, Qu, Shanshan, Doherty, Al and Hanan, Jim (2010) Analysis and modelling of the effects of water stress on maize growth and yield in dryland conditions. Plant Production Science, 13 2: 199-208. 34   0 Cited 0 times in Scopus0
Song, Youhong, Birch, Colin J. and Hanan, James S. (2008) Analysis of maize canopy development under water stress and incorporation into the ADEL-Maize model. Functional Plant Biology, 35 9-10: 925-935. 14   5 Cited 5 times in Scopus5
Noller, B. N., Woods, N., Adkins, S. W. and Hanan, J. S. (2004). An experimental wind tunnel facility to study the exposure and effect of aerosols containing pesticides biota. In: , Workshop on Contaminants and Ecological Risk Assessment. Contaminants and Ecological Risk Assessment, Adelaide, Australia, (19-19). 5-7 April, 2004. 70  
Prusinkiewiez, P, Hanan, J and Mech, R (2000) An L-system-based plant modeling language. Applications of Graph Transformations With Industrial Relevance, Proceedings, 1779 : 395-410. 82   21
Noller, B. N., Woods, N., Adkins, S. W. and Hanan, J. S. (2004). Application of an experimental wind tunnel facility to study the exposure and effect of aerosols containing pesticides on biota. In: , Science - a smart state to be in. Interact 2004, Conrad Jupiters Gold Coast, Australia, (157-157). 4-8 July, 2004. 48  
Loch, B.I., Belward, J.A. and Hanan, J.S. (2005). Application of Surface Fitting Techniques for the Representation of Leaf Surfaces. In: Andre Zerger and Robert M. Argent, International Congress on Modelling and Simulation Advances and Applications for Management and Decision Making. MODSIM05, University of Melbourne, (1272-1278). 12-15 December 2005. 96  
Birch, Colin J., Thornby, David, Adkins, Steve, Andrieu, Bruno and Hanan, Jim (2008). Architectural modeling of maize under water stress. In: E. Humpreys and K. O'Keeffe, Maize Association of Australia: 6th Triennial Conference and Proceedings. Maize Association of Australia 6th Triennial Conference, Griffith, NSW, Austrlia, (335-341). 21-23 February 2006. 113   3 Cited 4 times in Scopus4
Kumar, S. K., Hanan, J. S. and Adkins, S. W. (2002). Architectural responses of intra- and inter-species plant-plant interactions. In: H. Spafford Jacob, J. Dodd and J.H. Moore, 13th Australian Weeds Conference Paper & Proceedings. 13th Australian Weeds Conference, Perth, W.A./Sheraton Perth Hotel, (261-261). 8-13 September, 2002. 46  
Kaitaniemi, P, Room, PM and Hanan, JS (1999) Architecture and morphogenesis of grain sorghum, Sorghum bicolor (L.) Moench. Field Crops Research, 61 1: 51-60. 102   28
Bucciarelli, Bruna, Hanan, Jim, Palmquist, Debra and Vance, Carroll P. (2006) A standardized method for analysis of Medicago truncatula phenotypic development. Plant Physiology, 142 1: 207-219. 60   8 Cited 10 times in Scopus10
Morris, S., Ross, T., Cox, M., Renton, M., Hanan, J. and Beveridge, C. A. (2004). Auxin comes too little too late. In: , 18th International Conference on Plant Growth Substances. IPGSA, Canberra, Australia, (102-102). September 2004. 55  
Cao, Hong-xin, Liu, Yan, Liu, Yong-xia, Hanan, Jim Scott, Yue, Yan-bin, Zhu, Da-wei, Lu, Jian-fei, Sun, Jin-ying, Shi, Chun-lin, Ge, Dao-kuo, Wei, Xiu-fang, Yao, An-qing, Tian, Ping-ping and Bao, Tai-lin (2012) Biomass-based rice (Oryza sativa L.) aboveground architectural parameter models. Journal of Integrative Agriculture, 11 10: 1621-1632. 11   0 Cited 1 times in Scopus1
Loch, B. I., Belward, J. A. and Hanan, J. S. (2003). Boundary treatment for virtual leaf surfaces. In: S.N. Spencer, Graphite 2003. 1st International Conference on Computer Graphics & Interacting Techniques in Australasia & South East Asia, Melbourne, (261-262). 11-14 February 2003. 32  
Renton, M., Thornby, D. and Hanan, J. (2007). Canonical modelling. In: J. Vos, L. F. M. Marcelis, P. H. B. DeVisser, P. C. Struik and J. B. Evers, Functional-Structural Plant Modelling in Crop Production. Workshop on Functional-Structural Plant Modelling in Crop Production, Wageningen, Netherlands, (151-164). 5-8 March 2006. 14   5
Renton, M., Thornby, D. and Hanan, J. (2007). Canonical modelling: An approach for intermediate level simulation of carbon allocation in functional structural models. In Vos, J., Marcelis, L. F. M., de Visser, P. H. B., Struik, P. C. and Evers, J. B. (Ed.), Functional-Structural Plant Modelling in Crop Production 1st ed. (pp. 151-164) The Netherlands: Springer. 48  
Hosseini Cici, S. Z., Adkins, S. W., Sindel, M. and Hanan, J. S. (2006). Canopy interference of chickpea with sowthistle - model development. In: C. Preston, J. H. Wats and N. D. Crossman, 15th Australian Weeds Conference: Papers and Proceedings. Managing Weeds in a Changing Climate, Adelaide Convention Centre, SA, (426-427). 24-28 September, 2006. 73  
Pangga, Ireneo B., Hanan, Jim and Chakraborty, Sukumar (2013) Climate change impacts on plant canopy architecture: implications for pest and pathogen management. European Journal of Plant Pathology, 135 3: 595-610. 9   Cited 0 times in Scopus0
Dorr, G. J., Hanan, J., Woods, N., Adkins, S., Kleinmeulman, P., Ricci, P. and Noller, B. (2005). Combining spray drift and plant architecture modeling to minimise environmental and public health risk of pesticide application. In: Andre Zerger and Robert M. Argent, MODSIM 2005 International Congress on Modelling and Simulation. MODSIM05 International Congress on Modelling and Simulation, Melbourne, Australia, (279-285). 12-15 December 2005. 83  
Dorr, G. J., Hanan, J. S., Woods, N., Kleinmeulman, P. A., Adkins, S. W. and Noller, B. N. (2004). Combining spray drift and plant architecture modelling. In: C. Ramsay, A. Hewitt, H. Thistle, C. Hoffman, R. Wolf and T. Wolf, Proceedings of the International Conference on Pesticide Application for Drift Management. Intern'l Conf on Pesticide Application for Drift Management, Hawaii/ Hilton Waikoloa Village, (297-301). 27-29 October 2004. 43  
Kleinmeulman, P. A., Dorr, G. J., Woods, N., Hewitt, A. J., Noller, B. N., Hanan, J. S. and Adkins, S. W. (2004). Comparing droplet size and velocity of different hydraulic nozzle spray plumes. In: C. Ramsay, A. Hewitt, H. Thistle, C. Hoffman, R. Wolf and T. Wolf, Proceedings of the International Conference on Pesticide Application for Drift Management. Intern'l Conf on Pesticide Application for Drift Management, Hawaii/Hilton Waikoloa Village, (282-282). 27-29 October 2004. 129  
Cao, Hong-xin, Hanan, Jim Scott, Liu, Yan, Liu, Yong-xia, Yue, Yan-bin, Zhu, Da-wei, Lu, Jian-fei, Sun, Jin-ying, Shi, Chun-lin, Ge, Dao-kuo, Wei, Xiu-fang, Yao, An-qing, Tian, Ping-ping and Bao, Tai-lin (2012) Comparison of crop model validation methods. Journal of Integrative Agriculture, 11 8: 1274-1285. 10   0 Cited 0 times in Scopus0
Wenden, B, Dun, EA, Hanan, J, Andrieu, B, Weller, JL, Beveridge, CA and Rameau, C (2009) Computational analysis of flowering in pea (Pisum sativum). New Phytologist, 184 1: 153-167. 48   5 Cited 5 times in Scopus5
Han, L., Gresshoff, P. M. and Hanan, J. (2007). Computational approaches for studying signaling mechanisms behind legume autoregulation of nodulation. In: , Proceedings of the Bioinformatics Australia Conference, 2007. Bioinformatics Australia 2007, Brisbane, Australia, (). 23-24 October, 2007. 31  
Han, Liqi, Hanan, Jim and Gresshoff, Peter M. (2010) Computational complementation: a modelling approach to study signalling mechanisms during legume autoregulation of nodulation. PloS Computational Biology, 6 2: e1000685-1-e1000685-8. 50   4 Cited 4 times in Scopus4
Dun, EA, Hanan, J and Beveridge, CA (2009) Computational Modeling and Molecular Physiology Experiments Reveal New Insights into Shoot Branching in Pea. PLANT CELL, 21 11: 3459-3472. 31   17 Cited 19 times in Scopus19
Hanan, J., Beveridge, C. A. and Nichols, K. C. (2007). Computational models for inquiry learning in biology. In: , Proceedings of the CSIRO Transformational Biology Workshop. CSIRO Transformational Biology Workshop, Black Mountain, Australia, (5-6). 18-20 June, 2007. 99  
Han, Liqi, Gresshoff, Peter M. and Hanan, Jim (2007). Computational models for studying signaling control mechanisms behind legume autoregulation of nodulation. In: Array, Abstracts of Complex '07: 8th Asia-Pacific Complex Systems Conference. 8th Asia-Pacific Complex Systems Conference, Gold Coast, Australia, (45-46). 2-7 July, 2007. 48  
Room, P, Hanan, J and Clarke, T (1998). 3D dynamics, scientific visualisation, VR and PPM in enotomology. In: , Pest Management - Future Challenges, Vols 1 and 2, Proceedings. 6th Australisian Applied Entomological Research Conference, Brisbane Australia, (A279-A288). Sep 29-Oct 02, 1998. 7   0
Runqiang, B., Chen, Y., Burrage, K., Hanan, J. S., Room, P. M. and Belward, J. A. (2002). Derivation of L-system models from measurements of biological branching structures using genetic algorithms. In: T. Hendtlass and M. Ali, Developments in Applied Artificial Intelligence, Proceedings. 15th International Conference on Industrial & Engineering Applications of Artificial Intelligence & Expert Systems, IEA/AIE 2002, Cairns, Australia, (514-524). 17-20 June, 2002. 48   1
Dorr, G. J., Noller, B., Hanan, J., Adkins, Stephen W., Woods, N., Hewitt, A. and Ricci, P. (2005). Development of a decision-making tool to minimise environmental and public health risk of pesticide application. In: , Proceedings of the 2005 International Chemical Congress of Pacific Basin. 2005 International Chemical Congress of Pacific Basin, Honolulu, Hawaii, USA, (). 15-20 December, 2005. 24  
Dorr, G., Noller, B. N., Woods, N., Hewitt, A. J., Hanan, J. S., Adkins, S. W. and Ricci, P. F. (2007). Development of a Decision-Making Tool to Minimize Environmental and Public Health Risk of Pesticide Application. In: Ivan R. Kennedy, Keith R. Solomon, Shirley J. Gee, Angus N. Crossan, Shuo Wang and Francisco Sanchez-Bayo, ACS SYMPOSIUM SERIES: Rational Environmental management of Agrochemicals: Risk Assessment, Monitoring, and Remedial Action. International Chemical Congress of Pacific Basin Societies (PACIFICHEM 2005), Honolulu, HI, (53-65). 15-20 Dec 2005. 126   3 Cited 1 times in Scopus1
Stolk, H. and Hanan, J. S. (2007). Discovering genetic regulatory network models in Pisum sativum. In: L. Oxley and D. Kulasiri, Proceedings of the MODSIM 2007 International Congress on Modelling and Simulation. MODSIM 2007: International Congress on Modelling and Simulation, Christchurch, New Zealand, (1999-2005). 10-13 December, 2007. 44 1
Stolk, Henk, Gates, Kevin and Hanan, Jim (2003). Discovery of Emergent Natural Laws by Hierarchical Multi-Agent Systems. In: J. Liu, B. Faltings, N. Zongh, R. Lu and T. Nishida, Proceedings of the International Conference on Intelligent Agent Technology. IEEE/WIC International Conference on Intelligent Agent Technology, Halifax, Canada, (75-82). October, 2003. 763 269 0
Hosseini Cici, S. Z., Adkins, S W and Hanan, J S (2006). 3D modelling of cicer arietinum architecture and phenology: relating phenotype to genotype. In: , Handbook & Abstracts 3rd International Conference on Legume Genomics & Genetics. Genes to Crops, Brisbane Convention & Exhibition Centre, (81-81). 9-13 April 2006. 78  
Cribb, Bronwem W., Hanan, Jim, Zalucki, Myron P. and Perkins, Lynda E. (2010) Effects of plant micro-environment on movement of Helicoverpa armigera (Hübner) larvae and the relationship to a hierarchy of stimuli. Arthropod-Plant Interactions, 4 3: 165-173. 31   2 Cited 2 times in Scopus2
Hanan, J. S. and Wang, Y. (2004). Floradig: a configurable program for capturing plant architecture. In: C. Godin et al., Proceedings of the 4th International Workshop on Functional-Structural Plant Models. 4th International Workshop on Functional-Structural Plant Models, Montpellier, France, (407-411). 7-11 June, 2004. 211  
Hanan, Jim and Prusinkiewicz, Prezemyslaw (2008) Foreword: Studying plants with functional–structural models. Functional Plant Biology, 35 10: vi-viii. 54   5 Cited 10 times in Scopus10
Renton, M, Kaitaniemi, P and Hanan, J (2005) Functional-structural plant modelling using a combination of architectural analysis, L-systems and a canonical model of function. Ecological Modelling, 184 2-4: 277-298. 93   9 Cited 21 times in Scopus21
Dun, E., Hanan, J. and Beveridge, C. A. (2007). Hypothesis-driven computational modelling of the shoot branching control network in pea. In: , Proceedings of the CSIRO Transformational Biology Workshop. CSIRO Transformational Biology Workshop, Black Mountain, Australia, (3-4). 18-20 June, 2007. 39  
Beveridge, Christine, Harding, Elizabeth, Renton, Michael, Bell, Paul, Parmenter, Kathy and Hanan, Jim (2004). Hypothesis driven modelling of long-distance signalling and plant development. In: C. Godin et al, Proceedings of the 4th International Workshop on Functional-Structural Plant Models (FSPM 04). 4th International Workshop on Functional-Structural Plant Models (FSPM 04), Montpellier, France, (390-390). 7-11 June, 2004. 38  
Beveridge, C. A., Hanan, J. S. and Burrage, K. (2001). Integrative plant physiology: Dealing with plant development as the outcome of an integrated, coordinated and dynamic regulatory network. In: , Molecular Genetics of Model Legumes Conference Proceedings. Molecular Genetics of Model Legumes - Impact for Legume Biolo, Golm, Germany, (68-68). 15th - 19th of September, 2001. 62  
Gaur, S., Adkins, S. W., Dorr, G. and Hanan, J. (2007). Interaction of crops, weeds and the environment: 3D architectural modeling and visualization for improved integrated weed management. In: B. Marambe, U. R. Sangkkara, W. M. De Costa and A. S. K. Abeysekara, Proceedings of the 21st Asian Pacific Weed Science Society (APWSS) Conference. 21st Asian Pacific Weed Science Society (APWSS) Conference, Colombo, Sri Lanka, (8-13). 2-6 October 2007. 70  

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