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Ivanova, Natalia, Tringe, Susannah G., Liolios, Konstantinos, Liu, Wen-Tso, Morrison, Norman, Hugenholtz, Philip and Kyrpides, Nikos C. (2010) A call for standardized classification of metagenome projects. Environmental Microbiology, 12 7: 1803-1805. doi:10.1111/j.1462-2920.2010.02270.x 86   11 Cited 12 times in Scopus12 0
Godoy-Vitorino, Filipa, Goldfarb, Katherine C., Karaoz, Ulas, Leal, Sara, Garcia-Amado, Maria A., Hugenholtz, Philip, Tringe, Susannah G., Brodie, Eoin L. and Dominguez-Bello, Maria Gloria (2012) Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows. ISME Journal, 6 3: 531-541. doi:10.1038/ismej.2011.131 96   15 Cited 15 times in Scopus15 6
Flowers, Jason J., He, Shaomei, Malfatti, Stephanie, Glavina del Rio, Tijana, Tringe, Susannah G., Hugenholtz, Philip and McMahon, Katherine D. (2013) Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal. ISME Journal, 7 12: 2301-2314. doi:10.1038/ismej.2013.117 31   11 Cited 10 times in Scopus10 3
He, Shaomei, Ivanova, Natalia, Kirton, Edward, Allgaier, Martin, Bergin, Claudia, Scheffrahn, Rudolf H., Kyrpides, Nikos C., Warnecke, Falk, Tringe, Susannah G. and Hugenholtz, Philip (2013) Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites. PLoS One, 8 4: . doi:10.1371/journal.pone.0061126 84   17 Cited 16 times in Scopus16 3
Warnecke, Falk, Luginbuehl, Peter, Ivanova, Natalia, Ghassemian, Majid, Richardson, Toby H., Stege, Justin T., Cayouette, Michelle, McHardy, Alice C., Djordjevic, Gordana, Aboushadi, Nahla, Sorek, Rotem, Tringe, Susannah G., Podar, Mircea, Martin, Hector Garcia, Kunin, Victor, Dalevi, Daniel, Madejska, Julita, Kirton, Edward, Platt, Darren, Szeto, Ernest, Salamov, Asaf, Barry, Kerrie, Mikhailova, Natalia, Kyrpides, Nikos C., Matson, Eric G., Ottesen, Elizabeth A., Zhang, Xinning, Hernandez, Myriam, Murillo, Catalina, Acosta, Luis G., Rigoutsos, Isidore, Tamayo, Giselle, Green, Brian D., Chang, Cathy, Rubin, Edward M., Mathur, Eric J., Robertson, Dan E., Hugenholtz, Philip and Leadbetter, Jared R. (2007) Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature, 450 7169: 560-565. doi:10.1038/nature06269 78   488 Cited 498 times in Scopus498 2
Lykidis, Athanasios, Chen, Chia-Lung, Tringe, Susannah G., McHardy, Alice C., Copeland, Alex, Kyrpides, Nikos C., Hugenholtz, Philip, Macarie, Hervé, Olmos, Alejandro, Monroy, Oscar and Liu, Wen-Tso (2011) Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium. ISME Journal, 5 1: 122-130. doi:10.1038/ismej.2010.125 77   22 Cited 22 times in Scopus22 10
Berg Miller, Margret E., Yeoman, Carl J., Chia, Nicholas, Tringe, Susannah G., Angly, Florent E., Edwards, Robert A., Flint, Harry J., Lamed, Raphael, Bayer, Edward A. and White, Bryan A. (2012) Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome. Environmental Microbiology, 14 1: 207-227. doi:10.1111/j.1462-2920.2011.02593.x 99   18 Cited 19 times in Scopus19 2
D'haeseleer, Patrik, Gladden, John M., Allgaier, Martin, Chain, Patrik S. G., Tringe, Susannah G., Malfatti, Stephanie A., Aldrich, Joshua T., Nicora, Carrie D., Robinson, Errol W., Pasa-Tolic, Ljiljana, Hugenholtz, Philip, Simmons, Blake A. and Singer, Steven W. (2013) Proteogenomic Analysis of a Thermophilic Bacterial Consortium Adapted to Deconstruct Switchgrass. Plos One, 8 7: e68465.1-e68465.11. doi:10.1371/journal.pone.0068465 36   8 Cited 7 times in Scopus7 59
He, Shaomei, Wurtzel, Omri, Singh, Kanwar, Froula, Jeff L., Yilmaz, Suzan, Tringe, Susannah G., Wang, Zhong, Chen, Feng, Lindquist, Erika A., Sorek, Rotem and Hugenholtz, Philip (2010) Validation of two ribosomal RNA removal methods for microbial metatranscriptomics. Nature Methods, 7 10: 807-812. doi:10.1038/NMETH.1507 120   55 Cited 59 times in Scopus59 11