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Ivanova, Natalia, Tringe, Susannah G., Liolios, Konstantinos, Liu, Wen-Tso, Morrison, Norman, Hugenholtz, Philip and Kyrpides, Nikos C. (2010) A call for standardized classification of metagenome projects. Environmental Microbiology, 12 7: 1803-1805. doi:10.1111/j.1462-2920.2010.02270.x 86   11 Cited 12 times in Scopus12 0
Godoy-Vitorino, Filipa, Goldfarb, Katherine C., Karaoz, Ulas, Leal, Sara, Garcia-Amado, Maria A., Hugenholtz, Philip, Tringe, Susannah G., Brodie, Eoin L. and Dominguez-Bello, Maria Gloria (2012) Comparative analyses of foregut and hindgut bacterial communities in hoatzins and cows. ISME Journal, 6 3: 531-541. doi:10.1038/ismej.2011.131 93   15 Cited 15 times in Scopus15 6
Flowers, Jason J., He, Shaomei, Malfatti, Stephanie, Glavina del Rio, Tijana, Tringe, Susannah G., Hugenholtz, Philip and McMahon, Katherine D. (2013) Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal. ISME Journal, 7 12: 2301-2314. doi:10.1038/ismej.2013.117 30   10 Cited 9 times in Scopus9 3
He, Shaomei, Ivanova, Natalia, Kirton, Edward, Allgaier, Martin, Bergin, Claudia, Scheffrahn, Rudolf H., Kyrpides, Nikos C., Warnecke, Falk, Tringe, Susannah G. and Hugenholtz, Philip (2013) Comparative metagenomic and metatranscriptomic analysis of hindgut paunch microbiota in wood- and dung-feeding higher termites. PLoS One, 8 4: . doi:10.1371/journal.pone.0061126 79   16 Cited 16 times in Scopus16 3
Warnecke, Falk, Luginbuehl, Peter, Ivanova, Natalia, Ghassemian, Majid, Richardson, Toby H., Stege, Justin T., Cayouette, Michelle, McHardy, Alice C., Djordjevic, Gordana, Aboushadi, Nahla, Sorek, Rotem, Tringe, Susannah G., Podar, Mircea, Martin, Hector Garcia, Kunin, Victor, Dalevi, Daniel, Madejska, Julita, Kirton, Edward, Platt, Darren, Szeto, Ernest, Salamov, Asaf, Barry, Kerrie, Mikhailova, Natalia, Kyrpides, Nikos C., Matson, Eric G., Ottesen, Elizabeth A., Zhang, Xinning, Hernandez, Myriam, Murillo, Catalina, Acosta, Luis G., Rigoutsos, Isidore, Tamayo, Giselle, Green, Brian D., Chang, Cathy, Rubin, Edward M., Mathur, Eric J., Robertson, Dan E., Hugenholtz, Philip and Leadbetter, Jared R. (2007) Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite. Nature, 450 7169: 560-565. doi:10.1038/nature06269 76   482 Cited 493 times in Scopus493 2
Lykidis, Athanasios, Chen, Chia-Lung, Tringe, Susannah G., McHardy, Alice C., Copeland, Alex, Kyrpides, Nikos C., Hugenholtz, Philip, Macarie, Hervé, Olmos, Alejandro, Monroy, Oscar and Liu, Wen-Tso (2011) Multiple syntrophic interactions in a terephthalate-degrading methanogenic consortium. ISME Journal, 5 1: 122-130. doi:10.1038/ismej.2010.125 76   21 Cited 21 times in Scopus21 10
Berg Miller, Margret E., Yeoman, Carl J., Chia, Nicholas, Tringe, Susannah G., Angly, Florent E., Edwards, Robert A., Flint, Harry J., Lamed, Raphael, Bayer, Edward A. and White, Bryan A. (2012) Phage–bacteria relationships and CRISPR elements revealed by a metagenomic survey of the rumen microbiome. Environmental Microbiology, 14 1: 207-227. doi:10.1111/j.1462-2920.2011.02593.x 96   18 Cited 18 times in Scopus18 2
D'haeseleer, Patrik, Gladden, John M., Allgaier, Martin, Chain, Patrik S. G., Tringe, Susannah G., Malfatti, Stephanie A., Aldrich, Joshua T., Nicora, Carrie D., Robinson, Errol W., Pasa-Tolic, Ljiljana, Hugenholtz, Philip, Simmons, Blake A. and Singer, Steven W. (2013) Proteogenomic Analysis of a Thermophilic Bacterial Consortium Adapted to Deconstruct Switchgrass. Plos One, 8 7: e68465.1-e68465.11. doi:10.1371/journal.pone.0068465 36   8 Cited 7 times in Scopus7 59
He, Shaomei, Wurtzel, Omri, Singh, Kanwar, Froula, Jeff L., Yilmaz, Suzan, Tringe, Susannah G., Wang, Zhong, Chen, Feng, Lindquist, Erika A., Sorek, Rotem and Hugenholtz, Philip (2010) Validation of two ribosomal RNA removal methods for microbial metatranscriptomics. Nature Methods, 7 10: 807-812. doi:10.1038/NMETH.1507 120   55 Cited 59 times in Scopus59 11