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Edwards, David, Batley, Jacqueline and Snowdon, Rod J. (2013) Accessing complex crop genomes with next-generation sequencing. Theoretical and Applied Genetics, 126 1: 1-11. doi:10.1007/s00122-012-1964-x 109   31 Cited 32 times in Scopus32 0
Love, Christopher G. and Edwards, David (2007). Accessing integrated Brassica. In John M. Walker (Ed.), Plant Bioinformatics - Methods and Protocols (pp. 229-243) New Jersey: Humana Press Inc. 275  
Ruperao, Pradeep, Chan, Chon-Kit, Azam, Sarwar, Karafiatova, Miroslava, Hayashi, Satomi, Cizkova, Jana, Saxena, Rachit K., Simkova, Hana, Song, Chi, Vrana, Jan, Chitikineni, Annapurna, Visendi, Paul, Gaur, Pooran M., Millan, Teresa, Singh, Karam B., Taran, Bunyamin, Wang, Jun, Batley, Jacqueline, Dolezel, Jaroslav, Varshney, Rajeev K. and Edwards, David (2014) A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies. Plant Biotechnology Journal, 12 6: 778-786. doi:10.1111/pbi.12182 14   1 Cited 1 times in Scopus1 3
Lim, Geraldine A. C., Jewell, Erica G., Li, Xi, Erwin, Timothy A., Love, Christopher, Batley, Jacqueline, Spangenberg, German and Edwards, David (2007) A comparative map viewer integrating genetic maps for Brassica and Arabidopsis. BMC Plant Biology, 7 40: 1-10. doi:10.1186/1471-2229-7-40 187   14 Cited 16 times in Scopus16 0
Cai, Guangqin, Yang, Qingyong, Yi, Bin, Fan, Chuchuan, Edwards, David, Batley, Jacqueline and Zhou, Yongming (2014) A complex recombination pattern in the genome of allotetraploid Brassica napusas revealed by a high-density genetic map. PLoS One, 9 10: e109910-e109910. doi:10.1371/journal.pone.0109910 13   Cited 0 times in Scopus0 1
Raman, Harsh, Raman, Rosy, Kilian, Andrzej, Detering, Frank, Long, Yan, Edwards, David, Parkin, Isobel A. P., Sharpe, Andrew G., Nelson, Matthew N., Larkan, Nick, Zou, Jun, Meng, Jinling, Aslam, M. Naveed, Batley, Jacqueline, Cowling, Wallace A. and Lydiate, Derek (2013) A consensus map of rapeseed (Brassica napus L.) based on diversity array technology markers: applications in genetic dissection of qualitative and quantitative traits. Bmc Genomics, 14 1: 277.1-277.13. doi:10.1186/1471-2164-14-277 65   13 Cited 10 times in Scopus10 1
Dalton-Morgan, Jessica, Hayward, Alice, Alamery, Salman, Tollenaere, Reece, Mason, Annaliese S., Campbell, Emma, Patel, Dhwani, Lorenc, Michał T., Yi, Bin, Long, Yan, Meng, Jinling, Raman, Rosy, Raman, Harsh, Lawley, Cindy, Edwards, David and Batley, Jacqueline (2014) A high-throughput SNP array in the amphidiploid species Brassica napus shows diversity in resistance genes. Functional and Integrative Genomics, 14 4: 643-655. doi:10.1007/s10142-014-0391-2 19   0 Cited 0 times in Scopus0 2
Brossier, Morgan, Cusack, Andrew, Edwards, David, Kelly, Michael and Sultanbawa, Yasmina (2011). Antimicrobial films from Kakadu plum. In: 12th Government Food Analysts Conference (GFAC), Brisbane, Australia, (). 22-24 February 2011. 84 95
Love, Christopher G., Batley, Jacqueline and Edwards, David (2003) Applied Computational Tools for Crop Genome Research. Journal of Plant Biotechnology, 5 4: 193-195. 89  
Edwards, David (Dave) (SAFS) (2014): Australian Wheat. The University of Queensland. Collection. 30  
Batley, Jacqueline, Jewell, Erica and Edwards, David (2007). Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers. In David Edwards (Ed.), Plant Bioinformatics - Methods and Protocols (pp. 473-494) Totowa, NJ: Humana Press Inc. 84  
Duran, Chris, Appleby, Nikki, Clark, Terry, Wood, David, Imelfort, Michael, Batley, Jacqueline and Edwards, David (2009) AutoSNPdb: An annotated single nucleotide polymorphism database for crop plants. Nucleic Acids Research, 37 Supp. 1: D951-D953. doi:10.1093/nar/gkn650 80   28 Cited 39 times in Scopus39 0
Erwin, Timothy A., Jewell, Erica G., Love, Christopher G., Lim, Geraldine A. C., Chapman, Ross, Batley, Jacqueline, Stajich, Jason E., Mongin, Emmanuel, Stupka, Elia, Ross, Bruce, Spangenberg, German and Edwards, David (2007) BASC: An integrated bioinformatics system for Brassica research. Nucleic Acids Research, 35 suppl 1: D870-D873. doi:10.1093/nar/gkl998 71   7 Cited 11 times in Scopus11 0
Lee, Hong C., Lai, Kaitao, Lorenc, Michal Tadeusz, Imelfort, Michael, Duran, Chris and Edwards, David (2012) Bioinformatics tools and databases for analysis of next-generation sequence data. Briefings in Functional Genomics, 11 1: 12-24. doi:10.1093/bfgp/elr037 74   10 Cited 18 times in Scopus18 1
Love, Christopher G., Robinson, Andrew J., Lim, Geraldine A. C., Hopkins, Clare J., Batley, Jacqueline, Barker, Gary, Spangenberg, German C. and Edwards, David (2005) Brassica ASTRA: An integrated database for Brassica genomic research. Nucleic Acids Research, 33 D656-D659. doi:10.1093/nar/gki036 118   10 Cited 21 times in Scopus21 0
Edwards, David, Wilcox, Stephen, Barrero, Roberto A., Fleury, Delphine, Cavanagh, Colin R., Forrest, Kerrie L., Hayden, Matthew J., Moolhuijzen, Paula, Keeble-Gagnere, Gabriel, Bellgard, Matthew I., Lorenc, Michal T., Shang, Catherine A., Baumann, Ute, Taylor, Jennifer M., Morell, Matthew K., Langridge, Peter, Appels, Rudi and Fitzgerald, Anna (2012) Bread matters: a national initiative to profile the genetic diversity of Australian wheat. Plant Biotechnology Journal, 10 6: 703-708. doi:10.1111/j.1467-7652.2012.00717.x 32   7 Cited 9 times in Scopus9 1
Kazakoff, Stephen H., Imelfort, Michael, Edwards, David, Koehorst, Jasper, Biswas, Bandana, Batley, Jacqueline, Scott, Paul T. and Gresshoff, Peter M. (2012) Capturing the biofuel wellhead and powerhouse: the chloroplast and mitochondrial genomes of the leguminous feedstock tree Pongamia pinnata. PloS One, 7 12: e51687.1-e51687.12. doi:10.1371/journal.pone.0051687 72   11 Cited 10 times in Scopus10 0
Ling, Alison E., Kaur, Jatinder, Burgesss, Benjamin, Hand, Melanie, Hopkins, Clare J., Li, Xi, Love, Christopher G., Vardy, Megan, Walkiewicz, Marzena, Spengenberg, German, Edwards, David and Batley, Jacqueline (2007) Characterization of simple sequence repeat markers derived in silico from Brassica rapa bacterial artificial chromosome sequences and their application in Brassica napus. Molecular Ecology Notes, 7 2: 273-277. doi:10.1111/j.1471-8286.2006.01578.x 95   18 Cited 19 times in Scopus19 0
Edwards, David (Dave) (SAFS) (2014): Chickpea Gbrowse data. The University of Queensland. Collection. 20  
Lu, Yun-Ze, Wang, Le, Yue, Hong, Wang, Meng-Xing, Deng, Ping-Chuan, Edwards, David and Weining, Song (2014) Comparative analysis of Stowaway-like miniature inverted repeat transposable elements in wheat group 7 chromosomes: Abundance, composition, and evolution. Journal of Systematics and Evolution, 52 6: 743-749. doi:10.1111/jse.12113     1 1
Sexton, Adrienne C., Cozijnsen, Anton J., Keniry, Andrew, Jewell, Erica, Love, Christopher G., Batley, Jacqueline, Edwards, David and Howlett, Barbara J. (2006) Comparison of transcription of multiple genes at three developmental stages of the plant pathogen Sclerotinia sclerotiorum. Fems Microbiology Letters, 258 1: 150-160. doi:10.1111/j.1574-6968.2006.00212.x 92   24 Cited 24 times in Scopus24 0
Deng, Pingchuan, Nie, Xiaojun, Wang, Le, Cui, Licao, Liu, Peixun, Tong, Wei, Biradar, Siddanagouda S., Edwards, David, Berkman, Paul, Simkova, Hana, Dolezel, Jaroslav, Luo, Mincheng, You, Frank, Batley, Jacqueline, Fleury, Delphine, Appels, Rudi and Weining, Song (2014) Computational identification and comparative analysis of miRNAs in Wheat Group 7 Chromosomes. Plant Molecular Biology Reporter, 32 2: 487-500. doi:10.1007/s11105-013-0669-x 41   1 Cited 0 times in Scopus0 0
Azam, Sarwar, Thakur, Vivek, Ruperao, Pradeep, Shah, Trushar, Balaji, Jayashree, Amindala, BhanuPrakash, Farmer, Andrew D., Studholme, David J., May, Gregory D., Edwards, David, Jones, Jonathan D. G. and Varshney, Rajeev K. (2012) Coverage-based consensus calling (cbcc) of short sequence reads and comparison of cbcc results to identify snps in chickpea (cicer arietinum; fabaceae), a crop species without a reference genome. American Journal of Botany, 99 2: 186-192. doi:10.3732/ajb.1100419 45   13 Cited 12 times in Scopus12 2
Imelfort, Michael and Edwards, David (2009) De novo sequencing of plant genomes using second-generation technologies. Briefings in Bioinformatics, 10 6: 609-618. doi:10.1093/bib/bbp039 94 1 49 Cited 56 times in Scopus56 0
Nie, Xiaojun, Li, Bianli, Wang, Le, Liu, Peixun, Biradar, Siddanagouda S., Li, Tao, Dolezel, Jaroslav, Edwards, David, Luo, Mingcheng and Song Weining (2012) Development of chromosome-arm-specific microsatellite markers in Triticum aestivum (Poaceae) using Ngs technology. American Journal of Botany, 99 9: E369-E371. doi:10.3732/ajb.1200077 30   3 Cited 6 times in Scopus6 0
Imelfort, Michael, Duran, Chris, Batley, Jacqueline and Edwards, David (2009) Discovering genetic polymorphisms in next-generation sequencing data. Plant Biotechnology Journal, 7 4: 312-317. doi:10.1111/j.1467-7652.2009.00406.x 58   54 Cited 63 times in Scopus63 0
Lorenc, Michal T., Hayashi, Satomi, Stiller, Jiri, Lee, Hong, Manoli, Sahana, Ruperao, Pradeep, Visendi, Paul, Berkman, Paul J., Lai, Kaitao, Batley, Jacqueline and Edwards, David (2012) Discovery of single nucleotide polymorphisms in complex genomes using SGSautoSNP. Biology, 1 2: 370-382. doi:10.3390/biology1020370 111   Cited 10 times in Scopus10 2
Berkman, Paul J., Visendi, Paul, Lee, Hong C., Stiller, Jiri, Manoli, Sahana, Lorenc, Michal T., Lai, Kaitao, Batley, Jacqueline, Fleury, Delphine, Simkova, Hana, Kubalakova, Marie, Weining, Song, Dolezel, Jaroslav and Edwards, David (2013) Dispersion and domestication shaped the genome of bread wheat. Plant Biotechnology Journal, 11 5: 564-571. doi:10.1111/pbi.12044 49   9 Cited 9 times in Scopus9 1
Varshney, Rajeev K., Song, Chi, Saxena, Rachit K., Azam, Sarwar, Yu, Sheng, Sharpe, Andrew G., Cannon, Steven, Baek, Jongmin, Rosen, Benjamin D., Tar'an, Bunyamin, Millan, Teresa, Zhang, Xudong, Ramsay, Larissa D., Iwata, Aiko, Wang, Ying, Nelson, William, Farmer, Andrew D., Gaur, Pooran M., Soderlund, Carol, Penmetsa, R. Varma, Xu, Chunyan, Bharti, Arvind K., He, Weiming, Winter, Peter, Zhao, Shancen, Hane, James K., Carrasquilla-Garcia, Noelia, Condie, Janet A., Upadhyaya, Hari D., Luo, Ming-Cheng, Thudi, Mahendar, Gowda, C. L. L., Singh, Narendra P., Lichtenzveig, Judith, Gali, Krishna K., Rubio, Josefa, Nadarajan, N., Dolezel, Jaroslav, Bansal, Kailash C., Xu, Xun, Edwards, David, Zhang, Gengyun, Kahl, Guenter, Gil, Juan, Singh, Karam B., Datta, Swapan K., Jackson, Scott A., Wang, Jun and Cook, Douglas R. (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nature Biotechnology, 31 3: 240-246. doi:10.1038/nbt.2491 42   100 Cited 98 times in Scopus98 86
Rosic, Nedeljka, Kaniewska, Paulina, Chan, Kenneth, Ling, Edmund, Edwards, David, Dove, Sophie and Hoegh-Guldberg, Ove (2014) Early transcriptional changes in the reef-building coral Acropora aspera in response to thermal and nutrient stress. BMC Genomics, 15 . doi:10.1186/1471-2164-15-1052 29   0 3
Yu, Douglas W., Wilson, Howard B., Frederickson, Megan E., Palomino, Wily, De La Colina, Rafael, Edwards, David P. and Balareso, Angel A. (2004) Experimental demonstration of species coexistence enabled by dispersal limitation. Journal of Animal Ecology, 73 6: 1102-1114. doi:10.1111/j.0021-8790.2004.00877.x 96   Cited 37 times in Scopus37 1
Kudapa, Himabindu, Ramalingam, Abirami, Nayakoti, Swapna, Chen, Xiaoping, Zhuang, Wei-Jian, Liang, Xuanqiang, Kahl, Guenter, Edwards, David and Varshney, Rajeev K. (2013) Functional genomics to study stress responses in crop legumes: Progress and prospects. Functional Plant Biology, 40 12: 1221-1233. doi:10.1071/FP13191 39   2 Cited 2 times in Scopus2 0
Duran, Chris, Eales, Dominic, Marshall, Daniel, Imelfort, Michael, Stiller, Jiri, Berkman, Paul J., Clark, Terry, McKenzie, Megan, Appleby, Nikki, Batley, Jacqueline, Basford, Kaye and Edwards, David (2010). Future tools for association mapping in crop plants. In: International Conference on Exploiting Genome Wide Association in Oilseed Brassicas - A Model for genetic Improvement of Major OECD Crops for Sustainable Future Farming, Perth, WA, Australia, (1017-1023). 9 - 12 November 2009. doi:10.1139/G10-057 140   19 Cited 21 times in Scopus21 0
Golicz, Agnieszka A., Martinez, Paula A., Zander, Manuel, Patel, Dhwani A., Van De Wouw, Angela P., Visendi, Paul, Fitzgerald, Timothy L., Edwards, David and Batley, Jacqueline (2014) Gene loss in the fungal canola pathogen Leptosphaeria maculans. Functional and Integrative Genomics, . doi:10.1007/s10142-014-0412-1 11   Cited 0 times in Scopus0 1
Raman, Harsh, Raman, Rosy, Eckermann, Paul, Coombes, Neil, Manoli, Sahana, Zou, Xiaoxiao, Edwards, David, Meng, Jinling, Prangnell, Roslyn, Stiller, Jiri, Batley, Jacqueline, Luckett, David, Wratten, Neil and Dennis, Elizabeth (2013) Genetic and physical mapping of flowering time loci in canola (Brassica napus L.). Theoretical and Applied Genetics, 126 1: 119-132. doi:10.1007/s00122-012-1966-8 64   13 Cited 13 times in Scopus13 1
Jiang, Qunyi, Yen, Shang-Heng, Stiller, Jiri, Edwards, David, Scott, Paul T. and Gresshoff, Peter M. (2012) Genetic, biochemical, and morphological diversity of the Legume Biofuel Tree Pongamia pinnata. Journal of Plant Genome Sciences, 1 3: 54-67. doi:10.5147/jpgs.2012.0084 150 3 0
Edwards, David and Wang, Xiaowu (2012). Genome sequencing initiatives. In David Edwards, Jacqueline Batley, Isobel Parkin and Chittaranjan Kole (Ed.), Genetics, genomics and breeding of Oilseed Brassicas (pp. 152-157) Enfield, NH, United States: Science Publishers. 116 20
Raman, Harsh, Raman, Rosy, Kilian, Andrzej, Detering, Frank, Carling, Jason, Coombes, Neil, Diffey, Simon, Kadkol, Gururaj, Edwards, David, McCully, Margaret, Ruperao, Pradeep, Parkin, Isobel A. P., Batley, Jacqueline, Luckett, David J. and Wratten, Neil (2014) Genome-wide delineation of natural variation for pod shatter resistance in Brassica napus. PLoS One, 9 7: e101673.1-e101673.13. doi:10.1371/journal.pone.0101673 18   1 Cited 1 times in Scopus1 0
Lai, Kaitao, Lorenc, Michal, T. and Edwards, David (2012) Genomic databases for crop improvement. Agronomy, 2 1: 62-73. doi:10.3390/agronomy2010062 77 7 0
Hong, Chang Pyo, Piao, Zhong Yun, Kang, Tae Wook, Batley, Jacqueline, Yang, Tae-Jin, Hur, Yoon-Kang, Bhak, Jong, Park, Beom-Seok, Edwards, David and Lim, Yong Pyo (2007) Genomic distribution of simple sequence repeats in Brassica rapa. Molecules and Cells, 23 3: 349-356. 100   30 Cited 35 times in Scopus35
Olsen, Jason, Galea, Victor J., Hunter, Mal, Edwards, David, Schaefer, James and Muller, Leeola (1996). Greenhouse and field responses of bell pepper to applied P in association with a network of extraradical mycorrhizal mycelium. In: ICOM Abstract Booklet. First International Conference on Mycorrhizae (ICOM 1), Berkeley, United States, (). 4-9 August 1996. 39 1
Tollenaere, Reece, Hayward, Alice, Dalton-Morgan, Jessica, Campbell, Emma, Lee, Joanne R. M., Lorenc, Michal T., Manoli, Sahana, Stiller, Jiri, Raman, Rosy, Raman, Harsh, Edwards, David and Batley, Jacqueline (2012) Identification and characterization of candidate Rlm4 blackleg resistance genes in Brassica napus using next-generation sequencing. Plant Biotechnology Journal, 10 6: 709-715. doi:10.1111/j.1467-7652.2012.00716.x 68   7 Cited 6 times in Scopus6 0
Burgess, Benjamin, Mountford, Hayley, Hopkins, Clare J., Love, Cristopher, Ling, Alison E., Spangenberg, German C., Edwards, David and Batley, Jacqueline (2006) Identification and characterization of simple sequence repeat (SSR) markers derived in silico from Brassica oleracea genome shotgun sequences. Molecular Ecology Notes, 6 4: 1191-1194. doi:10.1111/j.1471-8286.2006.01488.x 141   19 Cited 18 times in Scopus18 0
Keniry, Andrew, Hopkins, Clare J., Jewell, Erica, Morrison, Bruce, Spangenberg, German C., Edwards, David and Batley, Jacqueline (2006) Identification and characterization of simple sequence repeat (SSR) markers from Fragaria x ananassa expressed sequences. Molecular Ecology Notes, 6 2: 319-322. doi:10.1111/j.1471-8286.2005.01215.x 109   16 Cited 17 times in Scopus17 0
Reid, Dugald E., Hayashi, Satomi, Lorenc, Michal, Stiller, Jiri, Edwards, David, Gresshoff, Peter M. and Ferguson, Brett J. (2012) Identification of systemic responses in soybean nodulation by xylem sap feeding and complete transcriptome sequencing reveal a novel component of the autoregulation pathway. Plant Biotechnology Journal, 10 6: 680-689. doi:10.1111/j.1467-7652.2012.00706.x 40   12 Cited 11 times in Scopus11 0
Edwards, David, Stevenson, D., Forsyth, A., Hegarty, M., Batley, J., Holdsworth, M. and Edwards, K. J. (2002) Identification of transposon-tagged maize genes displaying homology to arrayed cDNA clones using Mutator insertion display. Genome Letters, 1 1: 48-55. 83  
Zander, Manuel, Patel, Dhwani A., Van de Wouw, Angela, Lai, Kaitao, Lorenc, Michal T., Campbell, Emma, Hayward, Alice, Edwards, David, Raman, Harsh and Batley, Jacqueline (2013) Identifying genetic diversity of avirulence genes in Leptosphaeria maculans using whole genome sequencing. Functional and Integrative Genomics, 13 3: 294-308. doi:10.1007/s10142-013-0324-5 36   2 Cited 3 times in Scopus3 1
Fujimoto, Yuka, Rentschler, Ruth, Le, Huong, Edwards, David and Härtel, Charmine E. J. (2014) Lessons learned from community organizations: inclusion of people with disabilities and others. British Journal of Management, 25 3: 518-537. doi:10.1111/1467-8551.12034 43   Cited 0 times in Scopus0 2
Edwards, David P., Tobias, Joseph A., Sheil, Douglas, Meijaard, Erik and Laurance, William F. (2014) Maintaining ecosystem function and services in logged tropical forests. Trends in Ecology and Evolution, 29 9: 511-520. doi:10.1016/j.tree.2014.07.003 12   1 Cited 1 times in Scopus1 23
Gikaara, Daniel M., Johnston, Margaret E. and Edwards, David G. (2004) Management of phosphorus supply to Australian floricultural species. Scientia Horticulturae, 102 3: 311-323. doi:10.1016/j.scienta.2004.02.008 277 540 6 Cited 6 times in Scopus6 0

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