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Dennis, Paul and Jones, Davey (2006). 14C pulse labelling and allocation imaging. In G√ľnter Neumann (Ed.), Handbook of methods used in rhizosphere research (pp. 336-337) Birmensdorf, Switzerland: Swiss Federal Research Institute WSL. 40  
Holmes, Rebecca, Williamson, Christine, Peters, Jo, Denny, Paul and Wells, Christine (2003) A comprehensive transcript map of the mouse Gnas imprinted complex. Genome Research, 13 6B: 1410-1415. doi:10.1101/gr.955503 30   47 Cited 47 times in Scopus47 0
Carvalhais, Lilia C., Dennis, Paul G., Badri, Dayakar V., Tyson, Gene W., Vivanco, Jorge M. and Schenk, Peer M. (2013) Activation of the jasmonic acid plant defence pathway alters the composition of rhizosphere bacterial communities. PLoS ONE, 8 2: . doi:10.1371/journal.pone.0056457 97   19 Cited 21 times in Scopus21 3
Soo, Rochelle M., Skennerton, Connor T., Sekiguchi, Yuji, Imelfort, Michael, Paech, Samuel J., Dennis, Paul G., Steen, Jason A., Parks, Donovan H., Tyson, Gene W. and Hugenholtz, Philip (2014) An expanded genomic representation of the phylum Cyanobacteria. Genome Biology and Evolution, Advance Access 1-42. doi:10.1093/gbe/evu073 64 2 6 Cited 7 times in Scopus7 13
Dennis, Paul G., Miller, Anthony J., Clark, Ian M., Taylor, Richard G., Valsami-Jones, Eugenia and Hirsch, Penny R. (2008) A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods, 75 1: 12-18. doi:10.1016/j.mimet.2008.04.013 16   7 Cited 12 times in Scopus12 0
Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2012) Application of metatranscriptomics to soil environments. Journal of Microbiological Methods, 91 2: 246-251. doi:10.1016/j.mimet.2012.08.011 71   18 Cited 20 times in Scopus20 3
Bourne, David G, Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W. and Webster, Nicole (2013) Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. Isme Journal, 7 7: 1459-1459. doi:10.1038/ismej.2013.71 46   4 Cited 4 times in Scopus4 0
Bourne, David G., Dennis, Paul G., Uthicke, Sven, Soo, Rochelle M., Tyson, Gene W. and Webster, Nicole (2013) Coral reef invertebrate microbiomes correlate with the presence of photosymbionts. Isme Journal, 7 7: 1452-1458. doi:10.1038/ismej.2012.172 35   9 Cited 8 times in Scopus8 5
Vanwonterghem, Inka, Jensen, Paul D., Dennis, Paul G., Hugenholtz, Philip, Rabaey, Korneel and Tyson, Gene W. (2014) Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters. ISME Journal, Advance Online 1-14. doi:10.1038/ismej.2014.50 59 1 Cited 0 times in Scopus0 13
Dennis, Paul G., Seymour, Justin, Kumbun, Kimber and Tyson, Gene W. (2013) Diverse populations of lake water bacteria exhibit chemotaxis towards inorganic nutrients. ISME Journal, 7 8: 1661-1664. doi:10.1038/ismej.2013.47 60   2 Cited 3 times in Scopus3 4
Hirsch, Penny R., Miller, Anthony J. and Dennis, Paul G. (2013). Do root exudates exert more influence on rhizosphere bacterial community structure than other rhizodeposits?. In Frans J. de Bruijn (Ed.), Molecular Microbial Ecology of the Rhizosphere (pp. 229-242) Hoboken, NJ United States: Wiley-Blackwell. doi:10.1002/9781118297674.ch22 31   Cited 3 times in Scopus3 0
Pervin, Hasina M., Dennis, Paul G., Lim, Hui J., Tyson, Gene W., Batstone, Damien J. and Bond, Philip L. (2013) Drivers of microbial community composition in mesophilic and thermophilic temperature-phased anaerobic digestion pre-treatment reactors. Water Research, 47 19: 7098-7108. doi:10.1016/j.watres.2013.07.053 85   9 Cited 10 times in Scopus10 1
Dennis, Paul G., Harnisch, Falk, Yeoh, Yun Kit, Tyson, Gene W. and Rabaey, Korneel (2013) Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system. Applied and Environmental Microbiology, 79 13: 4008-4014. doi:10.1128/AEM.00569-13 116   11 Cited 9 times in Scopus9 1
Guo, Kun, Freguia, Stefano, Dennis, Paul G., Chen, Xin, Donose, Bogdan C., Keller, Jurg, Gooding, J. Justin and Rabaey, Korneel (2013) Effects of surface charge and hydrophobicity on anodic biofilm formation, community composition, and current generation in bioelectrochemical systems. Environmental Science and Technology, 47 13: 7563-7570. doi:10.1021/es400901u 49   13 Cited 16 times in Scopus16 1
Imelfort, Michael, Parks, Donovan, Woodcroft, Ben J., Dennis, Paul, Hugenholtz, Philip and Tyson, Gene W. (2014) GroopM: an automated tool for the recovery of population genomes from related metagenomes. PeerJ, 2014 1: 1-16. doi:10.7717/peerj.603 41   3 Cited 4 times in Scopus4 23
Pantos, Olga, Bongaerts, Pim, Dennis, Paul G., Tyson, Gene W. and Hoegh-Guldberg, OVe (2015) Habitat-specific environmental conditions primarily control the microbiomes of the coral Seriatopora hystrix. The ISME Journal, 1-12. doi:10.1038/ismej.2015.3 26   Cited 0 times in Scopus0 8
Cayford, Barry I., Dennis, Paul G., Keller, Jurg, Tyson, Gene W. and Bond, Philip L. (2012) High-throughput amplicon sequencing reveals distinct communities within a corroding concrete sewer system. Applied and Environmental Microbiology, 78 19: 7160-7162. doi:10.1128/AEM.01582-12 56 1 12 Cited 13 times in Scopus13 0
Dennis, Paul (2007). How do rhizosphere bacteria interact with their environment at the microhabitat scale? PhD Thesis, -, University College London. 27  
Carvalhais, Lilia C., Dennis, Paul G., Fan, Ben, Fedoseyenko, Dmitri, Kierul, Kinga, Becker, Anke, von Wiren, Nicolaus and Borriss, Rainer (2013) Linking plant nutritional status to plant-microbe interactions. PLoS One, 8 7: e68555.1-e68555.13. doi:10.1371/journal.pone.0068555 29   7 Cited 8 times in Scopus8 0
Dennis, Paul G., Hirsch, Penny R., Smith, Susan J., Taylor, Richard G., Valsami-Jones, Eugenia and Miller, Anthony J. (2009) Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods, 76 1: 101-104. doi:10.1016/j.mimet.2008.09.013 24   6 Cited 8 times in Scopus8 0
Cayford, Barry I., Dennis, Paul G., Tyson, Gene W. and Bond, Philip L. (2012). Microbial communities involved in the corrosion of concrete sewer infrastructure. In: 14th International Symposium on Microbial Ecology (ISME14), Copenhagan, Denmark, (). 19-24 August 2012. 31  
Cowan, Don A., Makhalanyane, Thulani P., Dennis, Paul G. and Hopkins, David W. (2014) Microbial ecology and biogeochemistry of continental Antarctic soils. Frontiers in Microbiology, 5 APR: . doi:10.3389/fmicb.2014.00154 15   1 Cited 0 times in Scopus0 6
Dennis, Paul, Miller, Anthony and Hirsch, Penny (2006). Non-destructive micro-scale sampling of bacteria from a root surface using a tungsten rod with a standardised sampling area controlled by a micromanipulator. In Peter Schweiger and Roger Finlay (Ed.), Handbook of methods used in rhizosphere research (pp. 384-385) Birmensdorf, Switzerland: Swiss Federal Research Institute WSL. 31  
Carvalhais, Lilia C., Dennis, Paul G. and Schenk, Peer M. (2014) Plant defence inducers rapidly influence the diversity of bacterial communities in a potting mix. Applied Soil Ecology, 84 1-5. doi:10.1016/j.apsoil.2014.06.011 99   0 Cited 0 times in Scopus0 0
Carvalhais, Lilia C., Dennis, Paul G., Tyson, Gene W. and Schenk, Peer M. (2013). Rhizosphere Metatranscriptomics: Challenges and Opportunities. In Frans J. de Bruijn (Ed.), Molecular Microbial Ecology of the Rhizosphere (pp. 1137-1144) Hoboken, NJ United States: Wiley-Blackwell. doi:10.1002/9781118297674.ch109 67   Cited 0 times in Scopus0 0
Carvalhais, Lilia C., Dennis, Paul G., Fedoseyenko, Dmitri, Hajirezaei, Mohammad-Reza, Borriss, Rainer and von Wiren, Nicolaus (2011) Root exudation of sugars, amino acids, and organic acids by maize as affected by nitrogen, phosphorus, potassium, and iron deficiency. Journal of Plant Nutrition and Soil Science, 174 1: 3-11. doi:10.1002/jpln.201000085 228   44 Cited 47 times in Scopus47 1
Dennis, Paul G., Rushton, Steven P., Newsham, Kevin K., Lauducina, Vito A., Ord, Victoria J., Daniell, Timothy J., O'Donnell, Anthony G. and Hopkins, David W. (2012) Soil fungal community composition does not alter along a latitudinal gradient through the maritime and sub-Antarctic. Fungal Ecology, 5 4: 403-408. doi:10.1016/j.funeco.2011.12.002 30 1 8 Cited 10 times in Scopus10 0
Dennis, Paul G., Guo, Kun, Imelfort, Michael, Jensen, Paul, Tyson, Gene W. and Rabaey, Korneel (2012) Spatial uniformity of microbial diversity in a continuous bioelectrochemical system. Bioresource Technology, 129 599-605. doi:10.1016/j.biortech.2012.11.098 39   9 Cited 11 times in Scopus11 0
Dennis, Paul, Miller, Anthony and Hirsch, Penny (2006). Visualisation of rhizosphere bacterial colonisation patterns. In Peter Schweiger and Roger Finlay (Ed.), Handbook of methods used in rhizosphere research (pp. 386-387) Birmensdorf, Switzerland: Swiss Federal Research Institute WSL. 19  
Dennis, Paul G., Newsham, Kevin K., Rushton, Steven P., Ord, Victoria J., O'Donnell, Anthony G. and Hopkins, David W. (2013) Warming constrains bacterial community responses to nutrient inputs in a southern, but not northern, maritime Antarctic soil. Soil Biology and Biochemistry, 57 248-255. doi:10.1016/j.soilbio.2012.07.009 34   6 Cited 5 times in Scopus5 0