Australian Institute for Bioengineering and Nanotechnology Publications

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Quek L-E and Nielsen LK (2009). Metabolic engineering of mammalian cells. In CD Smolke (Ed.), The Metabolic Pathway Engineering Handbook - Fundamentals (pp. 26-1-26-22) Boca Raton Florida, USA: CRC Press Taylor & Francis Group. 96  
Poirier, Yves and Brumbley, Stevens M. (2010). Metabolic engineering of plants for the synthesis of polyhydroxyalkanaotes. In Guo-Qiang Chen (Ed.), Plastics from Bacteria : Natural functions and applications [electronic resource] (pp. 187-211) London: Springer Verlag. doi:10.1007/978-3-642-03287-5_8 87   0
Arifin, Y., Sugiarto, H., Sabri, S., Kromer, J. O., Vickers, C. E. and Nielsen, L. K. (2010). Metabolic engineering of sucrose utilizing Escherichia coli for polyhydroxybutyrate production. In: 14th International Biotechnology Symposium and Exhibition (IBS-2008), Rimini, Italy, (S72-S73). 14-18 September 2010. doi:10.1016/j.jbiotec.2010.08.189 77   1 0
Brumbley, S.M., Petrasovits, L.A., Anderson, D., Purnell, M., Su, A., Zhao, L., Abeydeera P. and Nielsen L.K. (2007). Metabolic engineering of sugarcane for production of industrial chemicals. In: AusBioTech Biofutures Forum, Parliament House, Canberra, Australia, (). 14 June, 2007. 68  
Brumbley, S. M., Petrasovits, L. A., Anderson, D., Purnell, M. P., Su, M. P., Su, A., Zhao, L. and Nielsen, L. K. (2007). Metabolic engineering of sugarcane for production of industrial chemicals. In: The Fourth Annual World Congress on Industrial Biotechnology and Bioprocessing, Florida, U.S.A., (). 21-24 March, 2007. 80  
Vickers, Claudia E., Bongers, Mareike, Liu, Qing, Delatte, Thierry and Bouwmeester, Harro (2014) Metabolic engineering of volatile isoprenoids in plants and microbes. Plant, Cell and Environment, 37 8: 1753-1775. doi:10.1111/pce.12316 34   21 Cited 22 times in Scopus22 2
Vickers, C. E. (2012). Metabolic engineering using systems and synthetic biology. In: World Congress on Risk 2012: Final Program. World Congress on Risk 2012, Sydney, Australia, (75-75). 17-20 July 2012. 73 2
Quek, Lake-Ee, Dietmair, Stefanie, Kromer, Jens O. and Nielsen, Lars K. (2010) Metabolic flux analysis in mammalian cell culture. Metabolic Engineering, 12 2: 161-171. doi:10.1016/j.ymben.2009.09.002 143   76 Cited 92 times in Scopus92 0
Metabolic flux analysis : methods and protocols. Edited by Jens O. Kromer, Lars Nielsen and Lars M. Blank New York, NY United States: Humana Press, 2014. doi:10.1007/978-1-4939-1170-7 12   0
Lee, Sang Yup, Hong, Soon Ho, Park, Si Jae, van Wegen, Richard and Middelberg, Anton P. J. (2001). Metabolic flux analysis on the production of poly(3-hydroxybutyrate). In Yoshiharu Doi and Alexander Steinbüchel (Ed.), Polyesters I: Biological Systems and Biotechnological Production (pp. 249-261) Weinheim, Gemany: Wiley-VCH. doi:10.1002/3527600035 25   0
Kromer, Jens Olaf, Wittman, Christoph, Schroder, Hartwig and Heinzle, Elmar (2006) Metabolic pathway analysis for rational design of L-methionine production by Escherichia coli and Corynebacterium glutamicum. Metabolic Engineering, 8 4: 353-369. doi:10.1016/j.ymben.2006.02.001 88   57 Cited 72 times in Scopus72 0
Marcellin, Esteban, Chen, Wendy Y. and Nielsen, Lars K. (2012). Metabolic pathway engineering for hyaluronic acid production. In Peter Grundwald (Ed.), Carbohydrate modifying biocatalysts (pp. 571-584) Singapore: Pan Stanford Publishing. 208 23
Turner, Jennifer, Quek,Lake-Ee, Titmarsh, Drew, Kromer, Jens O., Kao, Li-Pin, Nielsen, Lars, Wolvetang, Ernst and Cooper-White, Justin (2014) Metabolic profiling and flux analysis of MEL-2 human embryonic stem cells during exponential growth at physiological and atmospheric oxygen concentrations. PLoS One, 9 11: e112757.1-e112757.13. doi:10.1371/journal.pone.0112757 50   8 Cited 8 times in Scopus8 8
de Oliveira Dal'Molin, Cristiana Gomes, Orellana, Camila, Gebbie, Leigh, Steen, Jennifer, Hodson, Mark, Plan, Manuel, Chrysanthopoulos, Panagiotis, Macqualter, Richard, Palfreyman, Robin W. and Nielsen, Lars K. (2016) Metabolic reconstruction of Setaria italica: a systems biology approach for integrating tissue-specific omics and pathway analysis of bioenergy grasses. Frontiers in Plant Science, 7 1138: 1-18. doi:10.3389/fpls.2016.01138     0 3
Punyadeera, Chamindie, Crowther, Nigel J., van der Merwe, Maria-Terésa, Toman, Marketa, Immelman, Andrew Ronnie, Schlaphoff, Glen P. and Gray, Ian Peter (2002) Metabolic response to a mixed meal in obese and lean women from two South African populations. Obesity Research, 10 12: 1207-1216. doi:10.1038/oby.2002.165 36   8 0 0
Dietmair, Stefanie, Hodson, Mark P., Quek, Lake-Ee, Timmins, Nicholas E., Chrysanthopoulos, Panagiotis, Jacob, Shana S., Gray, Peter and Nielsen, Lars K. (2012) Metabolite profiling of CHO cells with different growth characteristics. Biotechnology and Bioengineering, 109 6: 1404-1414. doi:10.1002/bit.24496 67   42 Cited 47 times in Scopus47 1
Schneider, K., Kromer, J.O., Christoph, W., Alves-Rodrigues, I., Meyerhans, A., Diez, J. and Heinzle, E. (2009). Metabolite profiling studies in Saccharomyces cerevisiae: an assisting tool to prioritize host targets for antiviral drug screening. In: Abstracts of the 14th European Congress on Biotechnology. 14th European Congress on Biotechnology, Barcelona, Spain, (S4-S4). 13–16 September 2009. doi:10.1016/j.nbt.2009.06.012 27   0 0
Schneider, Konstantin, Kromer, Jens Olaf, Wittmann, Christoph, Alves-Rodrigues, Isabel, Meyerhans, Andreas, Diez, Juana and Heinzle, Elmar (2009) Metabolite profiling studies in Saccharomyces cerevisiae: An assisting tool to prioritize host targets for antiviral drug screening. Microbial Cell Factories, 8 Article number 12: 12-1-12-14. doi:10.1186/1475-2859-8-12 80   10 Cited 9 times in Scopus9 0
Dietmair, Stefanie, Timmins, Nicholas E., Chrysanthopoulos, Panagiotis, Gray, Peter P., Krömer, Jens O. and Nielsen, Lars K. (2012). Metabolomic analysis of CHO cultures with different growth characteristics – development of a metabolite extraction protocol for suspension adapted mammalian cells. In Nigel Jenkins, Niall Barron and Paula Alves (Ed.), Proceedings of the 21st Annual Meeting of the European Society for Animal Cell Technology (ESACT), Dublin, Ireland, June 7-10, 2009 (pp. 37-41) Dordrecht, Netherlands: Springer. 136  
Rossato, L., MacFarlane, J., Whittaker, M., Pudmenzky, A., Doley, D., Schmidt, S. and Monteiro, M. J. (2011) Metal-binding particles alleviate lead and zinc toxicity during seed germination of metallophyte grass Astrebla lappacea. Journal of Hazardous Materials, 190 1-3: 772-779. doi:10.1016/j.jhazmat.2011.03.116 122   4 Cited 5 times in Scopus5 0
Rossato, L., Pudmenzky, A., Doley, D., Monteiro, M., Whittaker, M., Schmidt, S., MacFarlane, J. and Baker, A. J. M. (2009). Metal-binding particles enhance germination and radicle tolerance index of the metallophyte grass Astrebia lappacea Lindl. under phytotoxic lead and zinc condition. In: Mine Closure 2009: Proceedings of the Fourth International Seminar on Mine Closure. Mine Closure 2009: Fourth International Seminar on Mine Closure, Perth, WA, Australia, (301-309). 9-11 September 2009. 165  
Liu, Gang, Niu, Ping, Lu, Gao Qing and Cheng, Hui-Ming (2013). Metal-free photocatalysts: g-C3N4 and a-sulfur. In: Abstracts of Papers of the American Chemical Society. 245th National Meeting of the American Chemical Society (ACS), New Orleans La, (). 07-11 April 2013. 135   0
Zhang, J. B., Cheng, L., Yung, L. Y. L., Chua, S. S., Sze, J. Y., Zhu, S. L., Ayi, T. C. and Jeevaneswaran, R. (2009). Metallic nanoparticles and nanostructures for bio-applications. In: Selin Teo, A. Q. Liu, H. Li and B. Tarik, NEMS/MEMS Technology and Devices: Conference proceedings for symposium L of ICMAT 2009. 5th International Conference on Materials for Advanced Technologies (ICMAT 2009), Singapore, (119-123). 28 June - 3 July 2009. doi:10.4028/www.scientific.net/AMR.74.119 109 147 0 0
Jia, Yi, Sun, Chenghua, Peng, Ye, Fang, Wengi, Yan, Xuecheng, Yang, Dongjiang, Zou, Jin, Mao, Samuel S. and Yao, Xiangdong (2015) Metallic Ni nanocatalyst in situ formed from a metal-organic-framework by mechanochemical reaction for hydrogen storage in magnesium. Journal of Materials Chemistry A, 3 16: 8294-8299. doi:10.1039/c5ta00278h 40   5 Cited 5 times in Scopus5 1
Ma, Tian Yi, Dai, Sheng, Jaroniec, Mietek and Qiao, Shi Zhang (2014) Metal-organic framework derived hybrid co3O4-Carbon porous nanowire arrays as reversible oxygen evolution electrodes. Journal of the American Chemical Society, 136 39: 13925-13931. doi:10.1021/ja5082553 6   186 Cited 207 times in Scopus207 3
Osmond, Gillian, Boon, Jaap J., Puskar, Ljiljana and Drennan, John (2012) Metal stearate distributions in modern artists' oil paints: surface and cross-sectional investigation of reference paint films using conventional and synchrotron infrared microspectroscopy. Applied Spectroscopy, 66 10: 1136-1144. doi:10.1366/12-06659 63 1 13 Cited 14 times in Scopus14 0
Kelm, Jens M., Timmins, Nicholas E., Brown, Catherine J., Fussenegger, Martin and Nielsen, Lars K. (2003) Method for generation of homogeneous multicellular tumor spheroids applicable to a wide variety of cell types. Biotechnology And Bioengineering, 83 2: 173-180. doi:10.1002/bit.10655 208   293 Cited 324 times in Scopus324 0
Kim, Il, Haiqing, Li and Jung, Kyu Jo (2009). Method for Preparing Nanoparticles. . 27  
Lua, Linda and Reid, Steven (2005). Method of producing baculovirus. WO2005/045014 A1. 247  
Mao, Xueli, Chen, Zetao, Ling, Junqi, Quan, Jingjing, Peng, Hui and Xiao, Yin (2014) Methoxy-poly(ethylene glycol) modified poly(L -lactide) enhanced cell affinity of human bone marrow stromal cells by the upregulation of 1-cadherin and delta-2-catenin. BioMed Research International, 2014 Article ID 738239: . doi:10.1155/2014/738239 28   2 Cited 4 times in Scopus4 0
Bell, Craig A., Sun, Qiao, Zhang, Hong, Smith, Sean C., Bernhardt, Paul V. and Monteiro, Michael J. (2010) Methyl acrylate polymerizations in the presence of a copper/N3S3 macrobicyclic cage in DMSO at 25 °C. Polymer Chemistry, 1 2: 207-212. doi:10.1039/b9py00315k 78 2 4 Cited 4 times in Scopus4 0
Stirzaker, Clare, Zotenko, Elena, Song, Jenny Z., Qu, Wenja, Nair, Shalima, Locke, Warwick J., Stone, Andrew Stone, Armstrong, Nicola J., Robinson, Mark D., Dobrovic, Alexander, Avery-Kiejda, Kelly A., Peters, Kate M., French, Juliet D., Stein, Sandra, Korbie, Darren J., Trau, Matt, Forbes, John F., Scott, Rodney J., Brown, Melissa A., Francis, Glenn D. and Clark, Susan J. (2015) Methylome sequencing in triple negative breast cancer reveals distinct methylation clusters with prognostic value. Nature Communications, 6 5899: 1-11. doi:10.1038/ncomms6899 29   8 Cited 13 times in Scopus13 118
Sina, Abu Ali Ibn, G. Carrascosa, Laura, Palanisamy, Ramkumar, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014) Methylsorb: a simple method for quantifying DNA methylation using DNA-gold affinity interactions. Analytical Chemistry, 86 20: 10179-10185. doi:10.1021/ac502214z 64 2 0 Cited 6 times in Scopus6 2
Shiddiky, Muhammad J, Sina, Abu Ali Ibn, Carracosa, Laura G, Palanisamy, Ramkumar, Rauf, Sakandar and Trau, Matt (2014). Methylsorb: A Simple Method for Quantifying DNA Methylation Using DNA-gold Affinity Interactions. In: ICECE 2014, 8th International Conference on Electrical and Computer Engineering. 8th International Conference on Electrical and Computer Engineering, Dhaka, Bangladesh, (17-20). 20-22 December 2014. doi:10.1109/ICECE.2014.7027002 34 4 0 0
Li, Eugena, Xu, Zhi Ping and Rudolph, Victor (2009) MgCoAl-LDH derived heterogeneous catalysts for the ethanol transesterification of canola oil to biodiesel. Applied Catalysis B: Environmental, 88 1-2: 42-49. doi:10.1016/j.apcatb.2008.09.022 87   77 Cited 85 times in Scopus85 0
Low, Dorrain Y., Hodson, Mark P., Williams, Barbara A., D'Arcy, Bruce R. and Gidley, Michael J. (2016) Microbial biotransformation of polyphenols during in vitro colonic fermentation of masticated mango and banana. Food Chemistry, 207 214-222. doi:10.1016/j.foodchem.2016.03.108     0 0 2
Middelberg, Anton P. J. (2000). Microbial cell disruption by high-pressure homogenization. In Mohamed A. Desai (Ed.), Downstream Processing of Proteins (pp. 11-21) Totowa, NJ, U.S.A.: Humana Press. doi:10.1007/978-1-59259-027-8 50   0
Marcellin, Esteban, Chen, Wendy and Nielsen, Lars Keld (2009). Microbial hyaluronic acid biosynthesis. In B.H.A. Rehm (Ed.), Microbial Production of Biopolymers and Polymer Precursors: Applications and Perspectives (pp. 163-180) Norfolk, UK: Caister Academic Press. 136  
Chong, B. F., Blank, L., McLaughlin, R. L. and Nielsen, L. K. (2005) Microbial hyaluronic acid production. Applied Microbiology And Biotechnology, 66 4: 341-351. doi:10.1007/s00253-004-1774-4 224   129 Cited 150 times in Scopus150 0
Chuan, Yap P., Wibowo, Nani, Connors, Natalie K., Wu, Yang, Hughes, Fiona K., Batzloff, Michael R., Lua, Linda H. L. and Middelberg, Anton P. J. (2013) Microbially synthesized modular virus-like particles and capsomeres displaying group A streptococcus hypervariable antigenic determinants. Biotechnology and Bioengineering, Early View 6: 1-9. doi:10.1002/bit.25172 60 2 3 Cited 3 times in Scopus3 0
Liew, Mervyn W. O., Rajendran, Aravindan and Middelberg, Anton P. J. (2010) Microbial production of virus-like particle vaccine protein at gram-per-litre levels. Journal of Biotechnology, 150 2: 224-231. doi:10.1016/j.jbiotec.2010.08.010 110   28 Cited 30 times in Scopus30 0
Titmarsh, Drew and Cooper-White, Justin (2009) Microbioreactor array for full-factorial analysis of provision of multiple soluble factors in cellular microenvironments. Biotechnology and Bioengineering, 104 6: 1240-1244. doi:10.1002/bit.22504 136   17 Cited 18 times in Scopus18 0
Frith, Jessica E., Titmarsh, Drew M., Padmanabhan, Harish and Cooper-White, Justin J. (2013) Microbioreactor array screening of Wnt modulators and microenvironmental factors in osteogenic differentiation of Mesenchymal progenitor cells. PLoS One, 8 12: e82931.1-e82931.15. doi:10.1371/journal.pone.0082931 209   3 Cited 3 times in Scopus3 0
Titmarsh, Drew M., Hudson, James E., Hidalgo, Alejandro, Elefanty, Andrew G., Stanley, Edouard G., Wolvetang, Ernst J. and Cooper-White, Justin J. (2012) Microbioreactor arrays for full factorial screening of exogenous and paracrine factors in human embryonic stem cell differentiation. PLoS One, 7 12: e52405.1-e52405.12. doi:10.1371/journal.pone.0052405 60   13 Cited 16 times in Scopus16 1
Shiddiky, Muhammad J. A. and Shim, Yoon-Bo (2010). Microchip and capillary electrophoresis using nanoparticles. In Challa S. Kumar (Ed.), Microfluidic devices in nanotechnology: Applications (pp. 213-253) Hoboken, NJ, United States: Wiley. 284 6
Shiddiky, Muhammad J. A., Kim, Rog-Eun and Shim, Yoon-Bo (2005) Microchip capillary electrophoresis with a cellulose-DNA-modified screen-printed electrode for the analysis of neurotransmitters. Electrophoresis, 26 15: 3043-3052. doi:10.1002/elps.200410438 81 17 34 Cited 40 times in Scopus40 0
Koo, Kevin M., Wee, Eugene, Rauf, Sakandar, Shiddiky, Muhammad J. A. and Trau, Matt (2014) Microdevices for detecting locus-specific DNA methylation at CpG resolution. Biosensors and Bioelectronics, 56 278-285. doi:10.1016/j.bios.2014.01.029 132   11 Cited 13 times in Scopus13 2
Medina-Torres, C.E., Underwood, C., Pollitt, C.C., Castro-Olivera, E.M., Hodson, M.P., Richardson, D.W. and van Eps, A.W. (2015) Microdialysis measurements of equine lamellar perfusion and energy metabolism in response to physical and pharmacological manipulations of blood flow. Equine Veterinary Journal, . doi:10.1111/evj.12511     0 0
Medina-Torres, C. E., Underwood, C., Pollitt, C. C., Castro-Olivera, E. M., Hodson, M. P., Richardson, D. W. and Van Eps, A. W. (2015) Microdialysis measurements of lamellar perfusion and energy metabolism during the development of laminitis in the oligofructose model. Equine Veterinary Journal, 48 2: 246-252. doi:10.1111/evj.12417 27   1 0 0
Amiralian, Nasim, Edwards, Grant, Milne, John, Memmott, Paul, Annamalai, Pratheep K. and Martin, Darren (2013). Microfibrillated cellulose (MFC) from Triodia Pungens, an Australian native grass. In: Nano 2013: TAPPI 8th Annual International Conference on Nanotechnology for Renewable Materials, Stockholm, Sweden, (). 24-27 June, 2013. 57  

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