Institute for Molecular Bioscience - Publications

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Paczkowski, F. A., Sucic, S. and Bryan-Lluka, L. J. (2001). Similar effects of mutations in the first intracellular loop and fifth transmembrane domain of the human norepinephrine transporter. In: T. Nagatsu, D.S. Goldstein and R. McCarthy, Proceedings of the 9th International Catecholamine Symposium. The 9th International Catecholamine Symposium, Kyoto, Japan/Kyoto International Conference Hall, (65-65). 31 March - 5 April 2001. 52  
Mereyala, Hari Babu and Mamidyala, Sreeman Kumar (2004) Simple entry into isonucleosides: synthesis of 6-amino-9-[(3S,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-3-yl]purine. Tetrahedron letters, 45 14: 2965-2966. doi:10.1016/j.tetlet.2004.02.021 20   5 Cited 5 times in Scopus5 0
Mortimer, Jennifer C, Batley, Jacqueline, Love, Christopher G, Logan, Erica and Edwards, David (2005) Simple Sequence Repeat (SSR) and GC Distribution in the Arabidopsis thaliana Genome. Journal of Plant Biotechnology, 7 1: 17-25. 219  
Cloonan, Nicole and Grimmond, Sean M. (2010) Simplifying complexity. Nature Methods, 7 10: 793-795. doi:10.1038/nmeth1010-793 48 3 1 Cited 1 times in Scopus1 0
Tian, Tianhai, Xu, Songlin, Gao, Junbin and Burrage, Kevin (2007) Simulated maximum likelihood method for estimating kinetic rates in gene expression. Bioinformatics, 23 1: 84-91. doi:10.1093/bioinformatics/btl552 46   34 Cited 43 times in Scopus43 0
Rue, P, Villa-Freixa, J and Burrage, K (2010) Simulation methods with extended stability for stiff biochemical Kinetics. BMC Systems Biology, 4 110-1-110-13. doi:10.1186/1752-0509-4-110 32   6 Cited 8 times in Scopus8 0
Willner, Dana, Low, Serene, Steen, Jason A., George, Narelle, Nimmo, Graeme R., Schembri, Mark A. and Hugenholtz, Philip (2014) Single clinical isolates from acute uncomplicated urinary tract infections are representative of dominant In Situ populations. mBio, 5 2: e01064-13.1-e01064-13.10. doi:10.1128/mBio.01064-13 32   1 Cited 3 times in Scopus3 5
Gambin, Yann, Ariotti, Nicholas, McMahon, Kerrie-Ann, Bastiani, Michele, Sierecki, Emma, Kovtun, Oleksiy, Polinkovsky, Mark E., Magenau, Astrid, Jung, WooRam, Okano, Satomi, Zhou, Yong, Leneva, Natalya, Mureev, Sergey, Johnston, Wayne, Gaus, Katharina, Hancock, John F., Collins, Brett M., Alexandrov, Kirill and Parton, Robert G. (2014) Single-molecule analysis reveals self assembly and nanoscale segregation of two distinct cavin subcomplexes on caveolae. eLIFE, e01434.1-e01434.18. doi:10.7554/eLife.01434 100 2 15
Ferreon, Allan Chris M., Moran, Crystal R., Gambin, Yann and Deniz, Ashok A. (2010) Single-molecule fluorescence studies of intrinsically disordered proteins. Methods in Enzymology, 472 Part A: 179-204. doi:10.1016/S0076-6879(10)72010-3 78   28 Cited 30 times in Scopus30 0
Edwards, David, Forster, John W., Cogan, Noel O. I., Batley, Jacqueline and Chagné, David (2007). Single nucleotide polymorphism discovery. In Nnadozie C. Oraguzie, Erik H. A. Rikkerink, Susan E. Gardiner and H. Nihal Silva (Ed.), Association mapping in plants (pp. 53-76) New York, U.S.: Springer. 59  
Duran, C, Appleby, N, Vardy, M, Imelfort, M, Edwards, D and Batley, J (2009) Single nucleotide polymorphism discovery in barley using autoSNPdb. Plant Biotechnology Journal, 7 4: 326-333. doi:10.1111/j.1467-7652.2009.00407.x 50   24 Cited 33 times in Scopus33 3
Chagné, David, Batley, Jacqueline, Edwards, David and Forster, John W. (2007). Single Nucleotide Polymorphism Genotyping in Plants. In Oraguzie, Nnadozie C., Rikkerink, Erik H.A., Gardiner, Susan E. and De Silva, H. Nihal (Ed.), Association Mapping in Plants (pp. 77-94) New York: Springer. doi:10.1007/978-0-387-36011-9 52   0
Cooper, Sandra T., Lo, Harriet P. and North, Kathryn N. (2003) Single Section Western Blot: Improving the Molecular Diagnosis of the Muscular Dystrophies.. Neurology, 61 1: 93-97. 45   53 Cited 54 times in Scopus54
Li, Xin, Abell, C. and Cooper, M. A. (2008) Single-step biocompatible coating for sulfhydryl coupling of receptors using 2-(pyridinyldithio)ethylcarbamoyl dextran. Colloids and Surfaces B: Biointerfaces, 61 1: 113-117. doi:10.1016/j.colsurfb.2007.06.026 47   6 Cited 5 times in Scopus5 0
Luo, Lin, King, Nathan P., Yeo, Jeremy C., Jones, Alun and Stow, Jennifer L. (2013) Single-step protease cleavage elution for identification of protein-protein interactions from GST pull-down and mass spectrometry. Proteomics, Accepted Article 1-15. doi:10.1002/pmic.201300315 33 1 3 Cited 2 times in Scopus2 2
Shepherd, N. E., Hoang, H. N., Abbenante, G. and Fairlie, D. P. (2005) Single turn peptide alpha helices with exceptional stability in water. Journal of The American Chemical Society, 127 9: 2974-2983. doi:10.1021/ja0456003 96   81 Cited 85 times in Scopus85 0
Chappell, Keith J., Nall, Tessa A., Stoermer, Martin J., Fang, Ning-Xia, Tyndall, Joel D. A., Fairlie, David P. and Young, Paul R. (2005) Site-directed mutagenesis and kinetic studies of the West Nile virus NS3 protease identify key enzyme-substrate interactions. Journal of Biological Chemistry, 280 4: 2896-2903. doi:10.1074/jbc.M409931200 70   35 Cited 39 times in Scopus39 0
Duggin, I. G., Andersen, P. A., Smith, M. T., Wilce, J. A., King, G. F. and Wake, R. G. (1999) Site-directed mutants of RTP of Bacillus subtilis and the mechanism of replication fork arrest. Journal of Molecular Biology, 286 5: 1325-1335. doi:10.1006/jmbi.1999.2553 62   21 Cited 21 times in Scopus21 0
Marsac, Yoann, Cramer, Janina, Olschewski, Diana, Alexandrov, Kirill and Becker, Christian, F. (2006) Site-specific attachment of polyethylene glycol-like oligomers to proteins and peptides. Bioconjugate Chemistry, 17 6: 1492-1498. doi:10.1021/bc0601931 58   23 Cited 26 times in Scopus26 0
Mobli, Mehdi, Morgenstern, David, King, Glenn F., Alewood, Paul F. and Muttenthaler, Markus (2011) Site-specific pKa determination of selenocysteine residues in selenovasopressin using 77Se NMR. Angewandte Chemie (International Edition), 50 50: 11952-11955. doi:10.1002/anie.201104169 98   14 Cited 17 times in Scopus17 0
Hopkins, Clare J., Cogan, Noel O. I., Hand, Melanie, Jewelll, Erica, Kaur, Jatinder, Li, Xi, Lim, Geraldine A. C., Ling, Alison E., Love, Christopher, Mountford, Hayley, Todorovic, Marija, Vardy, Megan, Spangenberg, German C., Edwards, David and Batley, Jacqueline (2007) Sixteen new simple sequence repeat markers from Brassica juncea expressed sequences and their cross-species amplification. Molecular Ecology Notes, 7 4: 697-700. doi:10.1111/j.1471-8286.2007.01681.x 177   15 Cited 18 times in Scopus18 0
Smith, Aaron G. and Muscat, George E.O. (2005) Skeletal muscle and nuclear hormone receptors: Implications for cardiovascular and metabolic disease. International Journal of Biochemistry & Cell Biology, 37 10: 2047-2063. doi:10.1016/j.biocel.2005.03.002 123   71 Cited 72 times in Scopus72 0
Leong, Gary M., Subramaniam, Nanthakumar, Issa, Laura L., Barry, Janelle B., Kino, Tomoshige, Driggers, Paul H., Hayman, Michael J., Eisman, John A. and Gardiner, Edith M. (2004) Ski-interacting Protein, a Bifunctional Nuclear Receptor Coregulator that interacts with N-CoR/SMRT and p300. Biochemical And Biophysical Research Communications, 315 4: 1070-1076. doi:10.1016/j.bbrc.2004.02.004 86   35 Cited 39 times in Scopus39 3
Leong, Gary M., Subramaniam, Nanthakumar, Figueroa, Jonine, Flanagan, Judith L., Hayman, Michael J., Eisman, John A. and Kouzmenko, Alexander P. (2001) Ski-interacting Protein Interacts with Smad Proteins to Augment Transforming Growth Factor-beta-dependent Transcription. Journal of Biological Chemistry, 276 21: 18243-18248. doi:10.1074/jbc.M010815200 94   59 Cited 60 times in Scopus60 3
Abankwa, Daniel, Millard, Susan M., Martel, Nick, Choong, Catherine S., Yang, Miao, Butler, Lisa M., Buchanan, Grant, Tilley, Wayne D., Ueki, Nobuhide, Hayman, Michael J. and Leong, Gary M. (2013) Ski-interacting protein (SKIP) interacts with androgen receptor in the nucleus and modulates androgen-dependent transcription. Bmc Biochemistry, 14 1: 10.1-10.8. doi:10.1186/1471-2091-14-10 29   3 Cited 3 times in Scopus3 0
Sturm, RA (2002) Skin colour and skin cancer - MC1R, the genetic link. Melanoma Research, 12 5: 405-416. doi:10.1097/00008390-200209000-00001 120   118 Cited 148 times in Scopus148 0
Box, N. and Sturm, R. A. (2001) Skin colour and skin cancer - the genetic link. Today's Life Science, 13 20-24. 194  
Diaz, Marianne, Martel, Nick, Fitzsimmons, Rebecca L., Eriksson, Natalie A., Cowin, Gary J., Thomas, Gethin P., Lê Cao, Kim-Anh, Muscat, George E. O. and Leong, Gary M. (2012) Ski overexpression in skeletal muscle modulates genetic programs that control susceptibility to diet-induced obesity and insulin signaling. Obesity, 20 11: 2157-2167. doi:10.1038/oby.2012.101 105   1 Cited 2 times in Scopus2 0
Genovesi, Laura A., Ng, Ching Ging, Davis, Melissa J., Remke, Marc, Taylor, Michael D., Adams, David J., Rust, Alistair G., Ward, Jerrold M., Ban, Kenneth H., Jenkins, Nancy A., Copeland, Neal G. and Wainwright, Brandon J. (2013) Sleeping Beauty mutagenesis in a mouse medulloblastoma model defines networks that discriminate between human molecular subgroups. Proceedings of the National Academy of Sciences of the United States of America, 110 46: E4325-E4334. doi:10.1073/pnas.1318639110 32   4 Cited 4 times in Scopus4 50
Mann, Karen M., Ward, Jerrold M., Yew, Christopher Chin Kuan, Kovochich, Anne, Dawson, David W., Black, Michael A., Brett, Benjamin T., Sheetz, Benjamin T., Dupuy, Adam J., Chang, David K., Biankin, Andrew V., Waddell, Nicola, Kassahn, Karin S., Grimmond, Sean M., Rust, Alistair G., Adams, David J., Jenkins, Nancy A., Copeland, Neal G., Australian Pancreatic Cancer Genome Initiative, Miller, David K., Wilson, Peter J., Patch, Ann-Marie, Song, Sarah, Harliwong, Ivon, Idrisoglu, Senel, Nourse, Craig, Nourbakhsh, Ehsan, Manning, Suzanne, Wani, Shivangi, Gongora, Milena, Anderson, Matthew, Holmes, Oliver, Leonard, Conrad, Taylor, Darrin, Wood, Scott, Xu, Christina, Nones, Katia, Fink, J. Lynn, Christ, Angelika, Bruxner, Tim, Cloonan, Nicole, Newell, Felicity and Pearson, John V. (2012) Sleeping Beauty mutagenesis reveals cooperating mutations and pathways in pancreatic adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America, 109 16: 5934-5941. doi:10.1073/pnas.1202490109 111   57 Cited 59 times in Scopus59 9
Paladugu, M., Zou, J., Guo, Y. N., Aucherterlonie, G. J., Joyce, H. J., Goa, Q., Tan, H H., Jagadish, C. and Kim, Y. (2007). Sliding of Au droplet in vapor?liquid?solid growth of semiconductor nanowire heterostructures. In: Proceedings. Nanostructures for Electronics Energy and Environment (NanoE3), Couran Cove, Qld, Australia, (24-35). 23-28 September, 2007. 76  
Lopes, Debora O., Paiva, Leonardo F., Martins, Mauricio A., Cardoso, Fernanda C., Rajao, Matheus A., Pinho, Jean M., Caliari, Marcelo V., Correa-Oliveira, Rodrigo, Mello, Samantha M., Leite, Luciana. C. C. and Oliveira, Sergio C. (2009) Sm21.6 a novel EF-hand family protein member located on the surface of Schistosoma mansoni adult worm that failed to induce protection against challenge infection but reduced liver pathology. Vaccine, 27 31: 4127-4135. doi:10.1016/j.vaccine.2009.04.068 45   16 Cited 16 times in Scopus16 0
Whitten, Andrew E. and Trewhella, Jill (2009). Small-angle scattering and neutron contrast variation for studying bio-molecular complexes. In James Weifu Lee and Robert S. Foote (Ed.), Micro and nano technologies in bioanalysis : Methods and protocols (pp. 307-323) New York , NY, United States: Humana Press. doi:10.1007/978-1-59745-483-4_20 33   Cited 15 times in Scopus15 0
Jacques, David A. and Trewhella, Jill (2010) Small-angle scattering for structural biology-Expanding the frontier while avoiding the pitfalls. Protein Science, 19 4: 642-657. doi:10.1002/pro.351 23   107 Cited 115 times in Scopus115 0
Casey, Lachlan W., Mark, Alan E. and Kobe, Bostjan (2014) Small-Angle X-Ray Scattering for the Discerning Macromolecular Crystallographer. Australian Journal of Chemistry, 67 12: 1786-1792. doi:10.1071/CH14396 11   1 Cited 1 times in Scopus1 0
Jeffries, Cy M., Whitten, Andrew E., Harris, Samantha P. and Trewhella, Jill (2008) Small-angle X-ray scattering reveals the N-terminal domain organization of cardiac myosin binding protein C. Journal of Molecular Biology, 377 4: 1186-1199. doi:10.1016/j.jmb.2008.01.080 59   48 Cited 50 times in Scopus50 0
de Smith, Adam J., Walters, Robin G., Coin, Lachlan J. M., Steinfeld, Israel, Yakhini, Zohar, Sladek, Rob, Froguel, Philippe and Blakemore, Alexandra I. F. (2008) Small deletion variants have stable breakpoints commonly associated with Alu elements. PLoS ONE, 3 8: e3104.1-e3104.11. doi:10.1371/journal.pone.0003104 17   27 Cited 27 times in Scopus27 5
Halili, Maria A., Bachu, Prabhakar, Lindahl, Fredrik, Bechara, Cherine, Mohanty, Biswaranjan, Reid, Robert C., Scanlon, Martin, Robinson, Carol V., Fairlie, David P. and Martin, Jennifer L. (2015) Small molecule inhibitors of disulfide bond formation by the bacterial DsbA-DsbB dual enzyme system. ACS Chemical Biology, 10 4: 957-964. doi:10.1021/cb500988r 13   0 Cited 0 times in Scopus0 1
Hill, Timothy, Odell, Luke R., Edwards, Jennifer K., Graham, Mark E., McGeachie, Andrew B., Rusak, Jenny, Quan, Annie, Abagyan, Ruben, Scott, Janet L., Robinson, Phillip J. and McCluskey, Adam (2005) Small molecule inhibitors of dynamin I GTPase activity: Development of dimeric tyrphostins. Journal of Medicinal Chemistry, 48 24: 7781-7788. doi:10.1021/jm040208l 98   39 Cited 37 times in Scopus37 0
Tong, Wenyong, Gagnon, Martin, Sprules, Tara, Gilbert, Michael, Chowdhury, Shafinaz, Meerovitch, Karen, Hansford, Karl, Purisima, Enrico O., Blankenship, John W., Cheung, Nai-Kong V., Gehring, Kalle, Lubell, William D. and Saragovi, H. Uri (2010) Small-molecule ligands of GD2 ganglioside, designed from NMR studies, exhibit induced-fit binding and bioactivity. Chemistry and Biology, 17 2: 183-194. doi:10.1016/j.chembiol.2010.01.012 38   5 Cited 7 times in Scopus7 0
Fairlie, DP (2004) Small molecules that mimic components of bioactive protein surfaces. Australian Journal of Chemistry, 57 9: 855-857. doi:10.1071/CH04074 87   6 Cited 5 times in Scopus5 0
Clark, C. I., Reid, R. C., McGeary, R. P., Schafer, K. and Fairlie, D. P. (2000) Small peptides do not inhibit human non-pancreatic secretory phospholipase-A 2 (Type IIA). Bioichemistry BIophysical Research Communications, 274 3: 831-834. doi:10.1006/bbrc.2000.3221 36   2 Cited 2 times in Scopus2 0
Mattick, J. S. and Makunin, I. V. (2005) Small regulatory RNAs in mammals. Human Molecular Genetics, 14 Sp. Iss. 1: R121-R132. doi:10.1093/hmg/ddi101 70   231 Cited 280 times in Scopus280 0
Clancy, Jennifer L., Patel, Hardip R., Hussein, Samer M. I., Tonge, Peter D., Cloonan, Nicole, Corso, Andrew J., Li, Mira, Lee, Dong-Sung, Shin, Jong-Yeon, Wong, Justin J. L., Bailey, Charles G., Benevento, Marco, Munoz, Javier, Chuah, Aaron, Wood, David, Rasko, John E. J., Heck, Albert J. R., Grimmond, Sean M., Rogers, Ian M., Seo, Jeong-Sun, Wells, Christine A., Puri, Mira C., Nagy, Andras and Preiss, Thomas (2014) Small RNA changes en route to distinct cellular states of induced pluripotency. Nature Communications, 5 5522: 1-9. doi:10.1038/ncomms6522 21   4 Cited 7 times in Scopus7 61
Taft, Ryan J., Glazov, Evgeny A., Lassmann, Timo, Hayashizaki, Yoshihide, Carninci, Piero and Mattick, John S. (2009) Small RNAs derived from snoRNAs. RNA, 15 7: 1233-1240. doi:10.1261/rna.1528909 63   185 Cited 197 times in Scopus197 4
Zyta, Ziora, Tooru, KImura and Yoshiaki, Kiso (2006) Small-sized BACE1 inhibitors. Drugs of the Future, 31 1: 53-63. doi:10.1358/dof.2006.031.01.957326 40   36 Cited 34 times in Scopus34 0
Roberts, Tara L., Ho, Uda, Luff, John, Lee, C. Soon, Apte, Simon H., MacDonald, Kelli P. A., Raggatt, Liza-Jane, Pettit, Allison R., Morrow, Carl A., Waters, Michael J., Chen, Phil, Woods, Rick G., Thomas, Gethin P., St. Pierre, Liam, Farah, Camile S., Clarke, Raymond A., Brown, James A. L. and Lavin, Martin F. (2013) Smg1 haploinsufficiency predisposes to tumor formation and inflammation. PNAS: Proceedings of the National Academy of Sciences of the United States of America, 110 4: E285-E294. doi:10.1073/pnas.1215696110 85   5 Cited 6 times in Scopus6 1
Kaltenbach, Miriam, Stein, Viktor and Hollfelder, Florian (2011) SNAP dendrimers: multivalent protein display on dendrimer-like DNA for directed evolution. ChemBioChem, 12 14: 2208-2216. doi:10.1002/cbic.201100240 35   10 Cited 12 times in Scopus12 0
Ariotti, Nicholas and Parton Robert G. (2013) SnapShot: caveolae, caveolins, and cavins. Cell, 154 3: 704-705. doi:10.1016/j.cell.2013.07.009 44   2 Cited 1 times in Scopus1 0
Gray, Jesse M., Harmin, David A., Boswell, Sarah A., Cloonan, Nicole, Mullen, Thomas E., Ling, Joseph J., Miller, Nimrod, Kuersten, Scott, Ma, Yong-Chao, McCarroll, Steven A., Grimmond, Sean M. and Springer, Michael (2014) SnapShot-Seq: a method for extracting genome-wide, in Vivo mRNA dynamics from a single total RNA sample. PLoS ONE, 9 2: 1-17. doi:10.1371/journal.pone.0089673 14   3 Cited 2 times in Scopus2 8

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