Institute for Molecular Bioscience - Publications

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Lau, P., Nixon, S. J., Parton, R. G. and Muscat, G. E. O. (2004) ROR alpha regulates the expression of genes involved in lipid homeostasis in skeletal muscle cells - Caveolin-3 and CPT-1 are direct targets of ROR. Journal of Biological Chemistry, 279 35: 36828-36840. doi:10.1074/jbc.M404927200 190   92 Cited 95 times in Scopus95 0
Moulin, M. F., Bianchi, D., Boyault, A., Morin, S., Koufany, S., Francois, M., Netter, P., Jouzeau, J. Y. and Terlain, B. (2005) Rosiglitazone Induces Interleukin-1 Receptor Antagonist in Interleukin-1-beta-stimulated Rat Synovial Fibroblasts via a Peroxisome Proliferator-activated Receptor Beta/Delta-dependent Mechanism. Arthritis and Rheumatism, 52 3: 759-769. doi:10.1002/art.20868 61   19 Cited 19 times in Scopus19 0
Smith, Kelly A., Chocron, Sonja, von der Hardt, Sophia, de Pater, Emma, Soufan, Alexander, Bussmann, Jeroen, Schulte-Merker, Stefan, Hammerschmidt, Matthias and Bakkers, Jeroen (2008) Rotation and asymmetric development of the zebrafish heart requires directed migration of cardiac progenitor cells. Developmental Cell, 14 2: 287-297. doi:10.1016/j.devcel.2007.11.015 15   43 Cited 47 times in Scopus47 0
Bugarcic, Andrea and Taylor, John A. (2006) Rotavirus nonstructural glycoprotein NSP4 is secreted from the apical surfaces of polarized epithelial cells. Journal of Virology, 80 24: 12343-12349. doi:10.1128/JVI.01378-06 77   25 Cited 25 times in Scopus25 0
Aguilar, Marie-Isabel, Clayton, Daniel J., Holt, Phillip, Kronina, Veronica, Boysen, Reinhard I., Purcell, Anthony W. and Hearn, Milton T. W. (1998) RP-HPLC binding domains of proteins. Analytical Chemistry, 70 23: 5010-5018. doi:10.1021/ac980473c 30   16 Cited 20 times in Scopus20 0
Truffi, Marta, Dubreuil, Veronique, Liang, Xuan, Vacaresse, Nathalie, Nigon, Fabienne, Han, Siew Ping, Yap, Alpha S., Gomez, Guillermo A. and Sap, Jan (2014) RPTPα controls epithelial adherens junctions, linking E-cadherin engagement to c-Src-mediated phosphorylation of cortactin. Journal of Cell Science, 127 11: 2420-2432. doi:10.1242/jcs.134379 31   2 Cited 3 times in Scopus3 0
Wilhelm, Dagmar (2007) R-spondin1 - discovery of the long-missing, mammalian female-determining gene?. BioEssays, 29 4: 314-318. doi:10.1002/bies.20553 70   11 Cited 10 times in Scopus10 0
Manga, P., Kromberg, J. G. R., Box, N. F., Sturm, R. A., Jenkins, T. and Ramsay, M. (1997) Rufous oculocutaneous albinism in Southern African Blacks is caused by mutations in the TYRP1 gene. American Journal of Human Genetics, 61 5: 1095-1101. doi:10.1086/301603 31   63 Cited 80 times in Scopus80 0
Stewart, M., Capon, R. J., White, J. M., Lacey, E., Tennant, S., Gill, J. H. and Shaddock, M.P (2004) Rugulotrosins A and B: Two new antibacterial metabolites from an Australian isolate of a penicillium sp.. Journal of Natural Products, 67 4: 728-730. doi:10.1021/np034038b 83   25 Cited 25 times in Scopus25 0
Craik, D. J., Mylne, J., Conlan, B. and Anderson, M. (2010). Running rings around proteins: Protease-mediated biosynthesis of circular peptide and proteins. In: EPS 2010: The 31st European Peptide Symposium, Copenhagen, Denmark, (35-36). 5-9 September 2010. doi:10.1002/psc.1301 54   0 0
Premkumar, Lakshmanane, Heras, Begoña, Duprez, Wilko, Walden, Patricia, Halili, Maria, Kurth, Fabian, Fairlie, David P. and Martin, Jennifer L. (2013) Rv2969c, essential for optimal growth in Mycobacterium tuberculosis, is a DsbA-like enzyme that interacts with VKOR-derived peptides and has atypical features of DsbA-like disulfide oxidases. Acta Crystallographica Section D: Biological Crystallography, 69 10: 1981-1994. doi:10.1107/S0907444913017800 50   7 Cited 5 times in Scopus5 0
Spangenberg, G. C., Sawbridge, T., Ong, E. K, Edwards, D. and et al. (2005). Ryegrass ASTRA: a web-based resource for Lolium EST analysis. In: M.O. Humphreys, Molecular breeding for the genetic improvement of forage crops and turf. Proceedings of the 4th international symposium on the molecular breeding of forage and turf, a satellite workshop of the XXth International Grassland Congress. 4th International Symposium on the Molecular Breeding of Forage and Turf, a satellite workshop of the XXth International Grassland Congress, Aberystwyth, Wales, (201). 3-7 July, 2005. 62  
Yang, Z., Yan, W. X., Tedla, N., Armishaw, C., Di Girolamo, N., Wang, H. W., Hampartzoumian, T., Simpson, J. L., Gibson, P. G., Hunt, J., Hart, P., Hughes, J. M., Perry, M. A., Alewood, P. F. and Geczy, C. L. (2007) S100A12 provokes mast cell activation: A potential amplification pathway in asthma and innate immunity. Journal of Allergy And Clinical Immunology, 119 1: 106-114. doi:10.1016/j.jaci.2006.08.021 87   56 Cited 53 times in Scopus53 0
Bozinovski, S., Cross, M., Vlahos, R., Jones, J. E., Hsuu, K., Tessier, P. A., Reynolds, E. C., Hume, D. A., Hamilton, J. A., Geczy, C. L. and Anderson, G. P. (2005) S100A8 chemotactic protein is abundantly increased, but only a minor contributor to LPS-induced, steroid resistant neutrophilic lung inflammation in vivo. Journal of Proteome Research, 4 1: 136-145. doi:10.1021/pr049829t 60   30 Cited 31 times in Scopus31 0
Marcellin, Esteban, Mercer, Tim R., Licona-Cassani, Cuauhtemoc, Palfreyman, Robin W., Dinger, Marcel E., Steen, Jennifer A., Mattick, John S. and Nielsen, Lars K. (2013) Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch. BMC Genomics, 14 1: 15.1-15.9. doi:10.1186/1471-2164-14-15 62   4 Cited 4 times in Scopus4 1
Wang, Conan K., Broder, Ursula, Weeratunga, Saroja K., Gasser, Robin B., Loukas, Alex and Hofmann, Andreas (2012) SBAL: A practical tool to generate and edit structure-based amino acid sequence alignments. Bioinformatics, 28 7: 1026-1027. doi:10.1093/bioinformatics/bts035 20   10 Cited 9 times in Scopus9 2
Maggio, F. and King, G. F. (2002) Scanning mutagenesis of a Janus-faced atracotoxin reveals a bipartite surface patch that is essential for neurotoxic function. Journal of Biological Chemistry, 277 25: 22806-22813. doi:10.1074/jbc.M202297200 52   46 Cited 44 times in Scopus44 0
Adams, D. J., Grishin, A. A., Hung, A., Clark, R. J., Akondi, K., Alewood, P. F. and Craik, D. J. (2011). Scanning mutagenesis of alpha-conotoxin AuIB reveals a critical residue for activity at the alpha-3-beta-4 nicotinic acetylcholine receptor. In: Nicotinic Acetylcholine Receptors as Therapeutic Targets: Emerging Frontiers in Basic Research and Clinical Science. Satellite to the 2011 Meeting of the Society for Neuroscience. nAChR2011: Nicotinic Acetylcholine Receptors as Therapeutic Targets: Emerging Frontiers in Basic Research & Clinical Science, Washington, DC, U.S.A., (1028-1028). 9-11 November 2011. doi:10.1016/j.bcp.2011.07.017 95   0 0
Halai, Reena, Clark, Richard J., Nevin, Simon T., Jensen, Jonas E., Adams, David J. and Craik, David J. (2009) Scanning mutagenesis of alpha-conotoxin Vc1.1 reveals residues crucial for activity at the alpha-9 alpha-10 nicotinic acetylcholine receptor. Journal of Biological Chemistry, 284 30: 20275-20284. doi:10.1074/jbc.M109.015339 95   29 Cited 27 times in Scopus27 0
Tedford, H. W., Gilles, N., Menez, A., Doering, C. J., Zamponi, G. W. and King, G. F. (2004) Scanning mutagenesis of omega-atracotoxin-Hv1a reveals a spatially restricted epitope that confers selective activity against insect calcium channels. Journal of Biological Chemistry, 279 42: 44133-44140. doi:10.1074/jbc.M404006200 76   46 Cited 45 times in Scopus45 0
Cardoso, L. S., Oliveira, S. C., Góes, A. M., Oliveira, R. R., Pacífico, L. G., Marinho, F. V., Fonseca, C. T., Cardoso, F. C., Carvalho, E. M. and Araujo, M. I. (2010) Schistosoma mansoni antigens modulate the allergic response in a murine model of ovalbumin-induced airway inflammation. Clinical and Experimental Immunology, 160 2: 266-274. doi:10.1111/j.1365-2249.2009.04084.x 42   24 Cited 30 times in Scopus30 0
Farias, Leonardo P., Cardoso, Fernanda C., Miyasato, Patricia A., Montoya, Bogar O., Tararam, Cibele A., Roffato, Henrique K., Kawano, Toshie, Gazzinelli, Andrea, Correa-Oliveira, Rodrigo, Coulson, Patricia S., Wilson, R. Alan, Oliveira, Sérgio C. and Leite, Luciana C. C. (2010) Schistosoma mansoni Stomatin like protein-2 is located in the tegument and induces partial protection against challenge infection. PLoS Neglected Tropical Diseases, 4 2: e597-1-e597-13. doi:10.1371/journal.pntd.0000597 70   20 Cited 22 times in Scopus22 0
Cardoso, Fernanda C., Macedo, Gilson C., Gava, Elisandra, Kitten, Gregory T., Mati, Vitor L., de Melo, Alan L., Caliari, Marcelo V., Almeida, Giulliana T., Venancio, Thiago M., Verjovski-Almeida, Sergio and Oliveira, Sergio C. (2008) Schistosoma mansoni tegument protein Sm29 is able to induce a Th1-type of immune response and protection against parasite infection. PLoS Neglected Tropical Diseases, 2 10: e308.1-e308.10. doi:10.1371/journal.pntd.0000308 55   66 Cited 82 times in Scopus82 0
Leier, A., Burrage, K. and Burrage, P. M. (2007). Scholastic modelling and simulation of coupled autoregulated oscillators in a multicellular environment: the her1/her7 genes. In: Proceedings- ICCS 2007. Computational Science – ICCS 2007 7th International Conference, Beijing, China, (778-785). 27-30 May 2007. doi:10.1007/978-3-540-72584-8 265   0 0
Deane, Charlotte M., Kaas, Quentin and Blundell, Tom L. (2001) SCORE: Predicting the core of protein models. Bioinformatics, 17 6: 541-550. doi:10.1093/bioinformatics/17.6.541 34   12 Cited 12 times in Scopus12 0
Bowles, Josephine, Bullejos, Monica and Koopman, Peter (2000) Screening for novel mammalian sex-determining genes using expression cloning and microarray approaches. Australian Biochemist, 31 1: 4-6. 57  
Butler, Mark S. and Cooper, Matthew A. (2012) Screening strategies to identify new antibiotics. Current Drug Targets, 13 3: 373-387. doi:10.2174/138945012799424624 188   13 Cited 9 times in Scopus9 0
Hollway, G. E., Maule, J., Gautier, P., Evans, T. M., Keenan, D. G., Lohs, C., Fischer, D., Wicking, C. and Currie, P. D. (2006) Scube2 mediates Hedgehog signalling in the zebrafish embryo. Developmental Biology, 294 1: 104-118. doi:10.1016/j.ydbio.2006.02.032 45   45 Cited 45 times in Scopus45 0
Johnson, Jacque-Lynne F. A., Hall, Thomas E., Dyson, Jennifer M., Sonntag, Carmen, Ayers, Katie, Berger, Silke, Gautier, Philippe, Mitchell, Christina, Hollway, Georgina E. and Currie, Peter D. (2012) Scube activity is necessary for Hedgehog signal transduction in vivo. Developmental Biology, 368 2: 193-202. doi:10.1016/j.ydbio.2012.05.007 26   13 Cited 14 times in Scopus14 2
Beiko, R. G., Keith, J. M., Harlow, T. J. and Ragan, M. A. (2006) Searching for convergence in phylogenetic Markov chain Monte Carlo. Systematic Biology, 55 4: 553-565. doi:10.1080/10635150600812544 46   37 Cited 38 times in Scopus38 0
Bullejos Martin, M., Bowles, J. and Koopman, P. A. (2001) Searching for missing pieces of the sex-determination puzzle. Journal of Experimental Zoology, 290 5: 517-522. doi:10.1002/jez.1095 72   12 Cited 12 times in Scopus12 0
Bailey, Timothy L. and Noble, William Stafford (2003) Searching for statistically significant regulatory modules. Bioinformatics, 19 2 (Supp): ii16-ii25. doi:10.1093/bioinformatics/btg1054 34   4 Cited 75 times in Scopus75 0
Phang, Siew-Moi, Wong, Ching-Lee, Lim, Phaik-Eem, Yeong, Hui-Yin and Chan, Cheong Xin (2005) Seaweed diversity of Langkawi with emphasis on Northeast Langkawi. Malaysian Journal of Science, 24 77-94. 71  
Petry, Renate, Craik, David, Haaima, Gerald, Fromme, Bernhard, Klump, Horst, Kiefer, Wolfgang, Palm, Dieter and Millar, Robert (2002) Secondary structure of the third extracellular loop responsible for ligand selectivity of a mammalian gonadotropin-releasing hormone receptor. Journal of Medicinal Chemistry, 45 5: 1026-1034. doi:10.1021/jm011036k 209   17 Cited 18 times in Scopus18 0
Kockx, M., Guo, D. N. L., Huby, T., Lesnik, P., Kay, J., Sabaretnam, T., Jary, E., Hill, M., Gaus, K., Chapman, J., Stow, J. L., Jessup, W. and Kritharides, L. (2007) Secretion of apolipoprotein E from macrophages occurs via a protein kinase A- and calcium-dependent pathway along the microtubule network. Circulation Research, 101 6: 607-616. doi:10.1161/CIRCRESAHA.107.157198 113   17 Cited 17 times in Scopus17 0
McConville, Malcolm J., Mullin, Kylie A., Ilgoutz, Steven C. and Teasdale, Rohan D. (2002) Secretory pathway of trypanosomatid parasites. Microbiology and Molecular Biology Reviews, 66 1: 122-154. doi:10.1128/MMBR.66.1.122-154.2002 67   142 Cited 147 times in Scopus147 0
Aitken, R. John, Koopman, Peter and Lewis, Sheena E. M. (2004) Seeds of concern. Nature, 432 7013: 48-52. doi:10.1038/432048a 46   157 Cited 174 times in Scopus174 1
Yap, Alpha S., Michael, Magdalene and Parton, Robert G. (2015) Seeing and believing: recent advances in imaging cell-cell interactions. F1000Research, 4 273.1-273.8. doi:10.12688/f1000research.6435.1 11   Cited 0 times in Scopus0 11
Fry, Bryan G., Koludarov, Ivan, Jackson, Timothy N. W., Holford, Mandë, Terrat, Yves, Casewell, Nicholas R., Undheim, Eivind A. B., Vetter, Irina, Ali, Syed A., Low, Dolyce H. W. and Sunagar, Kartik (2015). Seeing the woods for the trees: understanding venom evolution as a guide for biodiscovery. In Glenn F. King (Ed.), Venoms to drugs: venom as a source for the development of human therapeutics (pp. 1-36) Cambridge, United Kingdom: Royal Society of Chemistry. doi:10.1039/9781849737876-00001 283   0
Waters, Michael J. (2003) Seeking SOCS and sex steroids. Trends In Endocrinology and Metabolism, 14 4: 149-151. doi:10.1016/S1043-2760(03)00050-X 40   3 Cited 4 times in Scopus4 0
Esteban-Marcos, A, Darling, A. E. and Ragan, M. A. (2009) Seevolution: visualizing chromosome evolution. Bioinformatics, 25 7: 960-961. doi:10.1093/bioinformatics/btp096 62   4 Cited 4 times in Scopus4 0
François, Mathias, Short, Kieran, Secker, Genevieve A., Combes, Alexander, Schwarz, Quenten, Davidson, Tara-Lynn, Smyth, Ian, Hong, Young-Kwon, Harvey, Natasha L. and Koopman, Peter (2012) Segmental territories along the cardinal veins generate lymph sacs via a ballooning mechanism during embryonic lymphangiogenesis in mice. Developmental Biology, 264 2: 89-98. doi:10.1016/j.ydbio.2011.12.032 69   27 Cited 28 times in Scopus28 3
Kim, S-G., Ng, A.S. K., McLachlan, G. J. and Wang, D. (2003). Segmentation of brain MR images with bias field correction. In: B.C. Lovell, Proceedings of the 2003 APRS Workshop on Digital Image Computing. WDIC 2003, The University of Queensland, Brisbane, (3-8). 7 February 2003. 58  
Zhu, X., Ambroise, C and McLachlan, G J (2006) Selection bias in working wit the top genes in supervised classification of tissue samples. Statistical Methodology, 3 1: 29-41. doi:10.1016/j.stamet.2005.09.011 46   Cited 10 times in Scopus10 0
Larkum, Anthony W. D., Ross, Ian L., Kruse, Olaf and Hankamer, Ben (2012) Selection, breeding and engineering of microalgae for bioenergy and biofuel production. Trends in Biotechnology, 30 4: 198-205. doi:10.1016/j.tibtech.2011.11.003 81   47 Cited 54 times in Scopus54 1
Nguyen Hong, N., McPhee, C. P., Daniels, L. J. and Wade, C. M. (2001). Selection for growth rate in pigs on restricted feeding. Genetic parameters and correlated responses in residual feed intake. In: Neville Jopson, Biotechnology. Proceedings of the 14th Conference Association for the Advancement of Animal Breeding and Genetics (AAABG), Queenstown, New Zealand, (219-222). 30 July - 2 August, 2001. 43  
Lê Cao, Kim-Anh, Gonçalves, Olivier, Besse, Philippe and Gadat, Sébastien (2007) Selection of biologically relevant genes with a wrapper stochastic algorithm. Statistical Applications in Genetics and Molecular Biology, 6 1: 29-2-29-23. 39   1 Cited 10 times in Scopus10
Sanchez, Washington Y., de Veer, Simon J., Swedberg, Joakim E., Hong, Eui-Ju, Reid, Janet C., Walsh, Terry P., Hooper, John D., Hammond, Geoffrey L., Clements, Judith A. and Harris, Jonathan M. (2012) Selective cleavage of human sex hormone-binding globulin by kallikrein-related peptidases and effects on androgen action in LNCaP prostate cancer cells. Endocrinology, 153 7: 3179-3189. doi:10.1210/en.2012-1011 43 48 1 Cited 1 times in Scopus1 1
Xiao, Xue, Wang, Haowei, Huang, Zhiyan, Yang, Jun, Bian, Xiaoxia and Qin, Yong (2006) Selective diethylzinc reduction of imines in the presence of ketones catalyzed by Ni(acac) 2. Organic Letters, 8 1: 139-142. doi:10.1021/ol052628q 30   28 Cited 27 times in Scopus27 0
Li, J., Ariunbold, U., Mohammed-Suhaimi, N., Sunn, N. and Little, M. (2013). Selective Epithelial Potential of a Renal Mesenchymal Stem Cell-Like Population Derived From Mature Collecting Duct Epithelium. In: Abstracts of the 49th Annual Scientific Meeting of the Australian and New Zealand Society of Nephrology. 49th Annual Scientific Meeting of the Australian and New Zealand Society of Nephrology, Brisbane, QLD Australia, (24-24). 9-11 September 2013. doi:10.1111/nep.12121 23   0 0

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