Institute for Molecular Bioscience - Publications

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Aagaard, A., Listwan, P., Cowieson, N. P., Huber, T. L., Ravasi, T., Wells, C. A., Flanagan, J. U., Kellie, S., Hume, D. A., Kobe, B. and Martin, J. L. (2005) An inflammatory role for the mammalian carboxypeptidase inhibitor latexin: Relationship to cystatins and the tumor suppressor TIG1. Structure, 13 2: 309-317. doi:10.1016/j.str.2004.12.013 69   39 Cited 40 times in Scopus40 0
Iyer, Abishek, Lim, Junxian, Poudyal, Hemant, Reid, Robert C., Suen, Jacky Y., Webster, Julie, Prins, Johannes B., Whitehead, Jonathan P., Fairlie, David P. and Brown, Lindsay (2012) An inhibitor of phospholipase A2 group IIA modulates adipocyte signaling and protects against diet-induced metabolic syndrome in rats. Diabetes, 61 9: 2320-2329. doi:10.2337/db11-1179 99 3 7 Cited 9 times in Scopus9 1
Bugarcic, Andrea, Zimbardi, Kirsten, Macaranas, Julie and Thorn, Peter (2012) An inquiry-based practical for a large, foundation-level undergraduate laboratory that enhances student understanding of basic cellular concepts and scientific experimental design. Biochemistry and Molecular Biology Education, 40 3: 174-180. doi:10.1002/bmb.20587 101 2 5 Cited 6 times in Scopus6 0
Windley, Monique J., King, Glenn F. and Nicholson, Graham M. (2012). An insecticidal spider toxin that acts as a positive allosteric modulator of insect nicotinic acetylcholine receptors. In: 17th World Congress of the International-Society-on-Toxinology (IST)/Venom Week/4th International Scientific Symposium on All Things Venomous, Honolulu, Hawaii, United States, (169-170). 8-13 July 2012. doi:10.1016/j.toxicon.2012.04.147 102   0 0
Combes, A., Short, K., Lefevre, J., Ju, A., Georgas, K., Rumballe, B., Mcmahon, A., Hamilton, N., Smyth, I. and Little, M. (2013). An Integrated Cell, Tissue and Whole Organ Profile of Kidney Morphogenesis. In: 49th Annual Scientific Meeting of the Australian and New Zealand Society of Nephrology, Brisbane Australia, (24-24). 9-11 September 2013. doi:10.1111/nep.12121 43   0 0
Gresshoff, P. M., Men, A., Maguire, T. L., Grimmond, S. M., Lohar, D., Ayanru, T. S., Meksem, K., Lightfoot, D. T. and Stiller, J. (2000). An integrated functional genomics and genetics approach for the plant's function in symbiotic nodulation. In: Lotus japonicus Workshop. Lotus japonicus Workshop, Japan, (). 10-11 Nov, 2000. 74  
Gresshoff, P.M., Men, A., Maguire, T. L., Grimmond, S. M., Lohar, D., Ayanru, T. S., Meksem, K., Lightfoot, D. and Stiller, J. (2001). An integrated functional genomics and genetics approach for the plant's function in symbiotic nodulation. In: G. Spangenberg, Molecular Breeding of Forage Crops: Proceedings of the 2nd International Symposium, Molecular Breeding of Forage Crops. 2nd International Symposium, Molecular Breeding of Forage Crops, Lorne and Hamilton, Victoria, Australia, (275-283). 19-24 November 2000. 87  
Guipponi, Michel, Toh, Min-Yen, Tan, Justin, Park, Daeho, Hanson, Kelly, Ballana, Ester, Kwong, David, Cannon, Ping Z. F., Wu, Qingyu, Gout, Alex, Delorenzi, Mauro, Speed, Terence P., Smith, Richard J. H., Dahl, Henrik H., Petersen, Michael, Teasdale, Rohan D., Estivill, Xavier, Park, Woo Jin and Scott, Hamish S. (2008) An integrated genetic and functional analysis of the role of type II transmembrane serine proteases (TMPRSSs) in hearing loss. Human Mutation, 29 1: 130-141. doi:10.1002/humu.20617 108   24 Cited 25 times in Scopus25 0
Wang, Conan K. and Hofmann, Andreas (2015) An integrated Java tool for generating amino acid sequence alignments with mapped secondary structure elements. 3 Biotech, 5 1: 87-92. doi:10.1007/s13205-014-0222-0 9   1 0
The 1000 Genomes Project Consortium and Coin, L. J. M. (2012) An integrated map of genetic variation from 1,092 human genomes. Nature, 491 7422: 56-65. doi:10.1038/nature11632 36   1585 Cited 1360 times in Scopus1360 513
Combes, Alexander N., Short, Kieran M., Lefevre, James, Hamilton, Nicholas A., Little, Melissa H. and Smyth, Ian M. (2014) An integrated pipeline for the multidimensional analysis of branching morphogenesis. Nature Protocols, 9 12: 2859-2879. doi:10.1038/nprot.2014.193 18   Cited 1 times in Scopus1 1
Tan, Cindy S. E., Hobson-Peters, Jody M., Stoermer, Martin J., Fairlie, David P., Khromykh, Alexander A. and Hall, Roy A. (2013) An interaction between the methyltransferase and RNA dependent RNA polymerase domains of the West Nile virus NS5 protein. Journal of General Virology, 94 Pt. 9: 1961-1971. doi:10.1099/vir.0.054395-0 62   6 Cited 7 times in Scopus7 0
Gandy, Michael N., Corral, Maxime G., Mylne, Joshua S. and Stubbs, Keith A. (2015) An interactive database to explore herbicide physicochemical properties. Organic and Biomolecular Chemistry, 13 20: 5586-5590. doi:10.1039/c5ob00469a 27   0 Cited 0 times in Scopus0 0
Croft, L., Beatson, S. A., Whitchurch, C. B., Huang, B., Blakeley, R. L. and Mattick, J. S. (2000) An interactive web-based Pseudomonas aeruginosa genome database: discovery of new genes, pathways and structures. Microbiology, 146 2351-2364. 68   46
Hamilton, N. and Huber, T. (2008). An Introduction to Protein contact Prediction. In Jonathan M. Keith (Ed.), Bioinformatics (pp. 87-104) USA: Humana Press. doi:10.1007/978-1-60327-429-6-3 87   Cited 4 times in Scopus4 0
Ikonomopoulou, Maria P., Hodge, Mary and Whittier, Joan M. (2012) An investigation of organochlorine and polychlorobiphenyl concentrations in the blood and eggs of the carnivorous flatback turtle, Natator depressus, from Queensland, Australia. Chelonian Conservation and Biology, 11 2: 255-259. doi:10.2744/CCB-0981.1 62   0 Cited 1 times in Scopus1 0
Adolphe, C., Narang, M., Ellis, T., Wicking, C., Kaur, P. and Wainwright, B. (2004) An in vivo comparative study of sonic, desert and Indian hedgehog reveals that hedgehog pathway activity regulates epidermal stem cell homeostasis. Development, 131 20: 5009-5019. doi:10.1242/dev.01367 87   64 Cited 66 times in Scopus66 0
Becker, Bernd (2000) Anionic conjugate addition reactions for the preparation of substituted monosaccharides and disaccharides. Journal of Carbohydrate Chemistry, 19 3: 253-284. doi:10.1080/07328300008544078 36   6 0
Whitten, Andrew R. and Spackman, Mark A. (2006) Anisotropic displacement parameters for H atoms using an ONIOM approach. Acta Crystallographica Section B Structural Science, B62 5: 875-888. doi:10.1107/S0108768106020787 63   34 Cited 33 times in Scopus33 0
Rae, F. K., Martinez, G., Gillinder, K. R., Smith, A., Shooter, G., Forrest, A. R., Grimmond, S. M. and Little, M. H. (2004) Anlaysis of complementary expression profiles following WT1 induction versus repression reveals the cholesterol/fatty acid synthetic pathways as a possible major target of WT1. Oncogene, 23 17: 3067-3079. doi:10.1038/sj.onc.1207360 112   18 Cited 18 times in Scopus18 0
Hohenhaus, Daniel M., Schaale, Kolja, Le Cao, Kim-Anh, Seow, Vernon, Iyer, Abishek, Fairlie, David P. and Sweet, Matthew J. (2013) An mRNA atlas of G protein-coupled receptor expression during primary human monocyte/macrophage differentiation and lipopolysaccharide-mediated activation identifies targetable candidate regulators of inflammation. Immunobiology, 218 11: 1345-1353. doi:10.1016/j.imbio.2013.07.001 70   3 Cited 1 times in Scopus1 1
Morel, E, Parton, R. G. and Gruenberg, J (2009) Annexin A2-dependent polymerization of actin mediates endosome biogenesis. Developmental Cell, 16 3: 445-457. doi:10.1016/j.devcel.2009.01.007 86   82 Cited 81 times in Scopus81 0
Mayran, N., Parton, R. G. and Gruenberg, J. (2003) Annexin II regulates multivesicular endosome biogenesis in the degradation pathway of animal cells. Embo Journal, 22 13: 3242-3253. doi:10.1093/emboj/cdg321 93   121 Cited 132 times in Scopus132 0
Abraham, Raymond J. and Mobli, Mehdi (2007) An NMR, IR and theoretical investigation of 1H Chemical Shifts and hydrogen bonding in phenols. Magnetic resonance in chemistry, 45 10: 865-877. doi:10.1002/mrc.2060 191   31 Cited 25 times in Scopus25 0
Primmer, C. R., Papakostas, S., Leder, E. H., Davis, M. J. and Ragan, M. A. (2013) Annotated genes and nonannotated genomes: cross-species use of Gene Ontology in ecology and evolution research. Molecular Ecology, 22 12: 3216-3241. doi:10.1111/mec.12309 43   14 Cited 12 times in Scopus12 12
Crouthamel, Marykate, Abankwa, Daniel, Zhang, Li, DiLizio, Cherisse, Manning, David R., Hancock, John F. and Wedegaertner, Philip B. (2010) An N-terminal polybasic motif of G alpha(q) is required for signaling and influences membrane nanodomain distribution. Molecular Pharmacology, 78 4: 767-777. doi:10.1124/mol.110.066340 70   3 Cited 3 times in Scopus3 0
Noel, Emily S., Verhoeven, Manon, Lagendijk, Anne Karine, Tessadori, Federico, Smith, Kelly, Choorapoikayil, Suma, Den Hertog, Jeroen and Bakkers, Jeroen (2013) A Nodal-independent and tissue-intrinsic mechanism controls heart-looping chirality. Nature Communications, 4 . doi:10.1038/ncomms3754 46 1 8 Cited 9 times in Scopus9 4
Thomson, J.A.F., Leonard, J.H., McGregor, K., Sturm, R.A. and Parsons, P.G. (1994) A nonconsensus octamer-recognition sequence (TAATGARAT-motif) identifies a novel DNA binding protein in human merkel cell carcinoma cell lines. International Journal of Cancer, 58 2: 285-290. doi:10.1002/ijc.2910580223 44   8 Cited 5 times in Scopus5 0
Mobli, Mehdi, Stern, Alan S., Bermel, Wolfgang, King, Glenn F. and Hoch, Jeffrey C. (2010) A non-uniformly sampled 4D HCC(CO)NH-TOCSY experiment processed using maximum entropy for rapid protein sidechain assignment. Journal of Magnetic Resonance, 204 1: 160-164. doi:10.1016/j.jmr.2010.02.012 61   25 Cited 26 times in Scopus26 0
Ong, H. K., Greenfield, P. F. and Pullammanappallil, P. (2000) An operational strategy for improved biomethanation of cattle-manure slurry in an unmixed, single-stage digester. Bioresource Technology, 73 1: 87-89. doi:10.1016/S0960-8524(99)00139-X 124   19 Cited 23 times in Scopus23 0
Wang, Xiao, Zhao, Liang and Zhao, Kong-Nan (2014). An optimized yeast cell-free lysate system for in vitro translation of human virus mRNA. In Kirill Alexandrov and Wayne A. Johnston (Ed.), Cell-free protein synthesis: methods and protocols (pp. 219-230) New York, United States: Springer. doi:10.1007/978-1-62703-782-2_14 90   0 0
Lesmono, D., Pollett, P. K., Tonkes, E. J. and Burrage, K. (2008) A note on the existence and uniqueness of a bounded mean-reverting process. Journal of the Indonesian Mathematical Society, 14 2: 83-93. 92  
Burrage, K. and Tian, T. (2000) A note on the stability properties of the Euler methods for solving stochastic differential equations. New Zealand Journal of Mathematics, 29 115-127. 90  
Niessen, Carien M. and Yap, Alpha S. (2006) Another job for the talented p120-catenin. Cell, 127 December: 875-877. doi:10.1016/j.cell.2006.11.014 61   8 Cited 9 times in Scopus9 0
Wunderlich, Winfried, Fialka, Irene, Teis, David, Alpi, Arno, Pfeifer, Andrea, Parton, Robert G., Lottspeich, Friedrich and Huber, Lukas A. (2001) A novel 14-kilodalton protein interacts with the mitogen-activated protein kinase scaffold MP1 on a late endosomal/lysosomal compartment. Journal of Cell Biology, 152 4: 765-776. doi:10.1083/jcb.152.4.765 101   135 Cited 137 times in Scopus137 3
Kee, A., Lucas, C., Szokolai, R., Yang, L., Martel, N., Leong, G., Muscat, G., Hughes, W., James, D., Gunning, P. and Hardeman, E. (2011). A novel actin filament class that regulates glucose uptake and GLUT4 trafficking. In: 2011 ASCB Annual Meeting abstracts. Annual Meeting of the American-Society-for-Cell-Biology (ASCB), Denver, CO, United States, (205.1-205.1). 3-7 December 2011. 71   0
Luo, Sulan, Zhangsun, Dongting, Schroeder, Christina I., Zhu, Xiaopeng, Hu, Yuanyan, Wu, Yong, Weltzin, Maegan M., Eberhard, Spencer, Kaas, Quentin, Craik, David J., McIntosh, J. Michael and Whiteaker, Paul (2014) A novel alpha4/7-conotoxin LvIA from Conus lividus that selectively blocks alpha3 beta2 vs. alpha6/alpha3 beta2 beta3 nicotinic acetylcholine receptors. FASEB Journal, Early Edition 4: 1-12. doi:10.1096/fj.13-244103 72   3 Cited 2 times in Scopus2 0
Nimjee, S. M., Keys, J. R., Pitoc, G. A., Quick, G., Rusconi, C. P. and Sullenger, B. A. (2006) A novel antidote-controlled anticoagulant reduces thrombin generation and inflammation and improves cardiac function in cardiopulmonary bypass surgery. Molecular Therapy, 14 3: 408-415. doi:10.1016/j.ymthe.2006.04.006 61   45 Cited 45 times in Scopus45 0
Liquet, Benoit, Le Cao, Kim-Anh, Hocini, Hakim and Thiebaut, Rodolphe (2012) A novel approach for biomarker selection and the integration of repeated measures experiments from two assays. BMC Bioinformatics, 13 1: 325.1-325.14. doi:10.1186/1471-2105-13-325 57   10 Cited 8 times in Scopus8 1
Sohma, Youhei, Sasaki, Masato, Ziora, Zyta, Takahashi, N., Kimura, Tooru, Hayashi, Yoshio and Kiso, Yoshiaki (2004). A novel approach for the hydrophobic peptides synthesis and purification through O-N intramolecular acyl migration reaction. In: Michael Chorev, Tomi K. Sawyer and American Peptide Society, Peptide revolution: Genomics, proteomics & therapeutics: Proceedings of the eighteenth American Peptide Symposium. 18th American Peptide Symposium, Boston, MA, U.S.A., (67-68). 19-23 July 2003. 85   0
Giles, Nichole, Sierecki, Emma, Polinkovsky, Mark, Schroder, Kate, Alexandrov, Kirill and Gambin, Yann (2014). A novel approach to investigate the assembly of the NOD-like receptor inflammasomes. In: Across societies - Experimental Biology. Experimental Biology Meeting, San Diego Ca, (). 26-30 April 2014. 26   0
Reid, Robert C., March, Darren R., Dooley, Michael J., Bergman, Doug A., Abbenante, Giovanni and Fairlie, David P. (1996) A novel bicyclic enzyme inhibitor as a consensus peptidomimetic for the receptor-bound conformations of 12 peptidic inhibitors of HIV-1 protease. Journal of The American Chemical Society, 118 36: 8511-8517. doi:10.1021/ja960433v 90   42 Cited 35 times in Scopus35 0
Rowland, J. E., Marshall, N. J., Leung, K. C., Ho, K.K.Y, Cotterill, A. M., Rowlinson, S.W. and Waters, M. J. (2002) A novel bioassay for human somatogenic activity in serum samples supports the clinical reliability of immunoassays. Clinical Endocrinology, 56 4: 475-485. doi:10.1046/j.1365-2265.2002.01507.x 85   12 Cited 14 times in Scopus14 0
Stehn, Justine R., Haass, Nikolas K., Bonello, Teresa, Desouza, Melissa, Kottyan, Gregg, Treutlein, Herbert, Zeng, Jun, Nascimento, Paula R. B. B., Sequeira, Vanessa B., Butler, Tanya L., Allanson, Munif, Fath, Thomas, Hill, Timothy A., McCluskey, Adam, Schevzov, Galina, Palmer, Stephen J., Hardeman, Edna C., Winlaw, David, Reeve, Vivienne E., Dixon, Ian, Weninger, Wolfgang, Cripe, Timothy P. and Gunning, Peter W. (2013) A novel class of anticancer compounds targets the actin cytoskeleton in tumor cells. Cancer Research, 73 16: 5169-5182. doi:10.1158/0008-5472.CAN-12-4501 100   19 Cited 17 times in Scopus17 83
Imperial, J. S., Bansal, P. S., Alewood, P. F., Daly, N. L., Craik, D., Sporning, A., Terlau, H., Lopez-Vera, E., Bandyopadhyay, P. K. and Olivera, B. M. (2006) A novel conotoxin inhibitor of Kv1.6 channel and nAChR subtypes defines a new superfamily of conotoxins. Biochemistry, 45 27: 8331-8340. doi:10.1021/bi060263r 102   47 Cited 46 times in Scopus46 0
Sester, David P., Thygesen, Sara J., Sagulenko, Vitaliya, Vajjhala, Parimala R., Cridland, Jasmyn A., Vitak, Nazarii, Chen, Kaiwen W., Osborne, Geoffrey W., Schroder, Kate and Katryn J. Stacey (2014) A novel flow cytometric method to assess inflammasome formation. The Journal of Immunology, 194 1: 455-462. doi:10.4049/jimmunol.1401110 48   1 Cited 1 times in Scopus1 2
Chan, V., Au, P., Lau, P. and Chan, T. K. (1994) A novel haemophilia B defect due to partial duplication of the factor IX gene. British Journal of Haematology, 86 3: 601-609. doi:10.1111/j.1365-2141.1994.tb04792.x 63   5 0
Treangen, T. J., Darling, A. E., Achaz. G., Ragan, M. A., Messequer, X. and Rocha, E. P. (2009) A novel heuristic for local multiple alignment of interspersed DNA repeats. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 6 2: 180-189. doi:10.1109/TCBB.2009.9 62   8 Cited 6 times in Scopus6 0
Simpson, Fiona, Martin, Sally, Evans, Timothy M., Kerr, Markus, James, David E., Parton, Robert G., Teasdale, Rohan D. and Wicking, Carol (2005) A novel hook-related protein family and the characterization of Hook-related protein 1. Traffic, 6 6: 442-458. doi:10.1111/j.1600-0854.2005.00289.x 117   39 Cited 39 times in Scopus39 3
Blanchfield, J. T., Adams, D. J., Alewood, P. F., Lewis, R. J. and Toth, I. (2000). A novel liposaccharide based system for peptide drug delivery. In: Proceedings of APSA. The APSA 2000 Annual Conference, Newcastle, (78-78). 6th - 8th December, 2000. 73  

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