Institute for Molecular Bioscience - Publications

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Harsha, H. C., Suresh, Shubha, Amanchy, Ramars, Deshpande, Nandan, Shanker, K., Yatish, A. J., Muthusamy, Babylakshmi, Vrushabendra, B. M., Rashmi, B. P., Chandrika, K. N., Padma, N., Sharma, Salil, Badano, Jose L., Ramya M. A., Nagaraj, S. H., Peri, Suraj, Choudhury, Dipanwita Roy, Kavitha, M. P., Saravana, R., Niranjan, Vidya, Gandhi, T. K. B., Ghosh, Neelanjana, Chandran, Sreenath, Menezes, Minal, Joy, Mary, Mohan, S. Sujatha, Katsanis, Nicholas, Deshpande, Krishna S., Raghothama, Chaerkady, Prasad, C. K. and Pandey, Akhilesh (2005) A manually curated functional annotation of the human X chromosome. Nature Genetics, 37 4: 331-332. doi:10.1038/ng0405-331 76   5 Cited 10 times in Scopus10 0
Keys, Janelle R., Tallack, Michael R., Zhan, Ye, Papathanasiou, Peter, Doodnow, Christopher C., Gaensler, Karin M., Crossley, Merlin, Dekker, Job and Perkins, Andrew C. (2008) A mechanism for Ikaros regulation of human globin gene switching. British Journal of Haematology, 141 3: 398-406. doi:10.1111/j.1365-2141.2008.07065.x 49   21 Cited 24 times in Scopus24 0
Budnar S. and Yap A.S. (2013) A mechanobiological perspective on cadherins and the actin-myosin cytoskeleton. F1000 Prime Reports, 5 35: 35.1-35.6. doi:10.12703/P5-35 41   Cited 5 times in Scopus5 0
Cowieson, N. P., Wensley, B., Robin, G., Guncar, G., Forwood, J. K., Hume, D. A., Kobe, B. and Martin, J. L. (2008). A medium or high throughput protein refolding assay. In Bostjan Kobe, Mitchell Guss and Thomas Huber (Ed.), Structural Proteomics: High throughput Methods (pp. 269-275) USA: Humana Press. 89  
Sturm, Richard A., Bisshop, Fiona, Takahashi, Hiroyuki and Parsons, Peter G. (1991) A melanoma octamer binding protein is responsive to differentiating agents. Cell Growth & Differentiation, 2 10: 519-524. 28   32 Cited 22 times in Scopus22
Craik, D. J. (2007). American Peptide Society - 20th Symposium: Peptide vaccine and drug development. In: American Peptide Society: 20th Symposium. American Peptide Society: 20th Symposium, Montreal, Canada, (621-625). 26-30 June 2007. 110   1 Cited 0 times in Scopus0
Liu, Ganqiang, Mattick, John S. and Taft, Ryan (2013) A meta-analysis of the genomic and transcriptomic composition of complex life. Cell Cycle, 12 13: 2061-2072. doi:10.4161/cc.25134 39   14 Cited 15 times in Scopus15 0
Mattick, J. S., Gagen, M. J. and Stanley, S. (2003). A method for identifying effector molecules for gene network integration. WO 03/025229 A1. 43  
Landsberg, M. J., Bond, J., Gee, C. L., Martin, J. L. and Hankamer, B. (2006) A method for screening the temperature dependence of three-dimensional crystal formation. Acta Crystallographica Section D-biological Crystallography, 62 559-562. doi:10.1107/s0907444906006093 95   7 Cited 6 times in Scopus6 0
Huang, Bixing, Whitchurch, Cynthia B., Croft, Larry, Beatson, Scott A. and Mattick, John S. (2000) A minimal tiling path cosmid library for functional analysis of the Pseudomonas aeruginosa PAO1 genome. Microbial and Comparative Genomics, 5 4: 189-203. doi:10.1089/omi.1.2000.5.189 67   Cited 15 times in Scopus15 0
Ghosh, S. K., Somanadhan, B., Butler, M. S. and Lear, M. J. (2010). Amino acid stereochemical assignment and total synthesis of a natural anti-malarial peptide. In: Abstracts of Papers of the American Chemical Society. unknown, unknown, (). unknown. 34   0
Becker, Bernd and Cooper, Matthew A. (2013) Aminoglycoside antibiotics in the 21st century. ACS Chemical Biology, 8 1: 105-115. doi:10.1021/cb3005116 53   30 Cited 29 times in Scopus29 0
Ng, SK, McLachlan, GJ, Wang, K, Jones, LBT and Ng, SW (2006) A Mixture model with random-effects components for clustering correlated gene-expression profiles. Bioinformatics, 22 14: 1745-1752. doi:10.1093/bioinformatics/btl165 1052   69 Cited 74 times in Scopus74 0
Tedford, Hugo W., Maggio, Francesco, Reenan, Robert A. and King, Glenn F. (2007). A model genetic system for testing the in vivo function of peptide toxins. In: Ronald J. Nachman, Invertebrate Neuropeptides VII: Invertebrate Neuropeptide Conference 2006. 7th Invertebrate Neuropeptide Conference (INC2006), Guanajuato, Mexico, (51-56). 2006. doi:10.1016/j.peptides.2006.08.026 50   7 Cited 4 times in Scopus4 0
Eckle, Sidonia B.G., Birkinshaw, Richard W., Kostenko, Lyudmila, Corbett, Alexandra J., McWilliam, Hamish E. G., Reantragoon, Rangsima, Chen, Zhenjun, Gherardin, Nicholas A., Beddoe, Travis, Liu, Ligong, Patel, Onisha, Meehan, Bronwyn, Fairlie, David P., Villadangos, Jose A., Godfrey, Dale I., Kjer-Nielsen, Lars, McCluskey, James and Rossjohn, Jamie (2014) A molecular basis underpinning the T cell receptor heterogeneity of mucosal-associated invariant T cells. Journal of Experimental Medicine, 211 8: 1585-1600. doi:10.1084/jem.20140484 25   6 Cited 7 times in Scopus7 2
McDevitt, Christopher A., Ogunniyi, Abiodun D., Valkov, Eugene, Lawrence, Michael C., Kobe, Bostjan, McEwan, Alastair G. and Paton, James C. (2011) A molecular mechanism for bacterial susceptibility to zinc. PLoS Pathogens, 7 11: e1002357.1-e1002357.9. doi:10.1371/journal.ppat.1002357 112   53 Cited 61 times in Scopus61 10
Hodgson, S. S., Francois, M. and Khosrotehrani, K. (2012). A mouse model for in vivo quantitative monitoring of Wnt/b-catenin signaling in skin reveals hair cycle dynamics in sox18 mutant mice. In: Abstracts 22nd Annual Meeting of the European Tissue Repair Society. 22nd Annual Meeting of the European Tissue Repair Society, Athens, Greece, (A59-A59). October 4–5 2012. doi:10.1111/j.1524-475X.2012.00835.x 48   0 0
Ovenden, SPB, Capon, RJ, Lacey, E, Gill, JH, Friedel, T and Wadsworth, D (1999) Amphilactams A-D: Novel nematocides from southern Australian marine sponges of the genus Amphimedon. Journal of Organic Chemistry, 64 4: 1140-1144. doi:10.1021/jo981377e 83   20 Cited 23 times in Scopus23 0
Qin, Ling, Raggatt, L., Li, X., Tamasi, J., Feyen, J. H. M. and Partridge, N. C. (2003). Amphiregulin: A possible mediator of parathyroid hormone's anabolic actions in bone. In: Journal of Bone and Mineral Research: 25th Annual Meeting of the American Society for Bone and Mineral Research. 25th Annual Meeting of the American Society for Bone and Mineral Research, Minneapolis, Minnesota, U.S.A., (S100-S100). 19-23 September, 2003. 81   Cited 0 times in Scopus0
Qin, L., Tamasi, J., Raggatt, L., Li, X., Feyen, J., Lee, D., DiCicco-Bloom, E. and Partridge, N. C. (2004). Amphiregulin is a novel growth factor in bone stimulated by parathyroid hormone and required for normal bone development. In: FASEB Journal. Annual Meeting of the American Society for Biochemistry-and-Molecular-Biology/8th Congress of the International Union for Biochemistry and Molecular Biology, Boston, MA, USA, (C299-C299). 12-16 June 2004. 55  
Qin, Ling, Tamasi, Joseph, Raggatt, Liza, Li, Xin, Feyen, Jean H. M., DiCicco-Bloom|, Emanuel and Partridge, Nicola C. (2005) Amphiregulin Is a Novel Growth Factor Involved in Normal Bone Development and in the Cellular Response to Parathyroid Hormone Stimulation. Journal of Biological Chemistry, 280 5: 3974-3981. doi:10.1074/jbc.M409807200 54   46 Cited 50 times in Scopus50 0
Thomson, David A. C., Dimitrov, Krassen and Cooper, Matthew A. (2011) Amplification free detection of Herpes Simplex Virus DNA. Analyst, 136 8: 1599-1607. doi:10.1039/c0an01021a 83   8 Cited 8 times in Scopus8 0
Vetter, Irina, Hein, Alexander, Sattler, Simon, Hessler, Sabine, Touska, Filip, Bressan, Elisangela, Parra, Andres, Hager, Ulrich, Leffler, Andreas, Boukalova, Stepana, Nissen, Matthias, Lewis, Richard J., Belmonte, Carlos, Alzheimer, Christian, Huth, Tobias, Vlachova, Viktorie, Reeh, Peter W. and Zimmermann, Katharina (2013) Amplified Cold Transduction in Native Nociceptors by M-Channel Inhibition. Journal of Neuroscience, 33 42: 16627-16641. doi:10.1523/JNEUROSCI.1473-13.2013 60   3 Cited 3 times in Scopus3 1
White, Stefan, Hewitt, Jacqueline, Turbitt, Erin, van der Zwan, Yvonne, Hersmus, Remko, Drop, Stenvert, Koopman, Peter, Harley, Vincent, Cools, Martine, Looijenga, Leendert and Sinclair. Andrew (2012) A multi-exon deletion within WWOX is associated with a 46,XY disorder of sex development. European Journal of Human Genetics, 20 3: 348-351. doi:10.1038/ejhg.2011.204 90   7 Cited 10 times in Scopus10 0
Pinheiro, Carina S., Ribeiro, Ana Paula Dias, Cardoso, Fernanda C., Martins, Vicente P., Figueiredo, Barbara C. P., Assis, Natan R. G., Morais, Suellen B., Caliari, Marcelo V., Loukas, Alex and Oliveira, Sergio C. (2014) A multivalent chimeric vaccine composed of Schistosoma mansoni SmTSP-2 and Sm29 was able to induce protection against infection in mice. Parasite Immunology, Accepted Article 1-23. doi:10.1111/pim.12118 22 22 2 Cited 3 times in Scopus3 0
Herzig, Volker and Schmidt, Werner J. (2007) Amygdala cannulation alters expression of cocaine conditioned place preference and locomotion in rats. Addiction Biology, 12 3-4: 478-481. doi:10.1111/j.1369-1600.2007.00060.x 61   2 Cited 2 times in Scopus2 0
Singh, Yogendra, Sharpe, Philip C., Hoang, Huy N., Lucke, Andrew J., McDowall, Alasdair W., Bottomley, Stephen P. and Fairlie, David P. (2011) Amyloid formation from an α-helical peptide bundle is seeded by 310-helix aggregates. Chemistry: A European Journal, 17 1: 151-160. doi:10.1002/chem.201002500 61   8 Cited 8 times in Scopus8 0
Harrison, R. S., Sharpe, P. C., Singh, Y. and Fairlie, D. P. (2007). Amyloid peptides and proteins in review. In S. G. Amara, B. Bamberg, T. Fleischmann, S. C. Gudermann, S. C. Hebert, R. Jahn, W. J. Lederer, R. Lill, A. Miyajima, S. Offermanns and R. Zechner (Ed.), Reviews of physiology, biochemistry and pharmacology (pp. 1-77) Berlin, Germany: Springer. doi:10.1007/112_2007_0701 217   79 Cited 81 times in Scopus81 0
Gardiner, Donald M., Stephens, Amber E., Munn, Alan L. and Manners, John M. (2013) An ABC pleiotropic drug resistance transporter of Fusarium graminearum with a role in crown and root diseases of wheat. FEMS Microbiology Letters, 348 1: 36-45. doi:10.1111/1574-6968.12240 23   2 Cited 2 times in Scopus2 1
Henry, Roselani I., Cobbold, Simon A., Allen, Richard J. W., Khan, Asif, Hayward, Rhys, Lehane, Adele M., Bray, Patrick G., Howitt, Susan M., Biagini, Giancarlo A., Saliba, Kevin J. and Kirk, Kiaran (2010) An acid-loading chloride transport pathway in the intraerythrocytic malaria parasite, Plasmodium falciparum. The Journal of Biological Chemistry, 285 24: 18615-18626. doi:10.1074/jbc.M110.120980 62   5 Cited 5 times in Scopus5 0
Kee, Anthony J., Yang, Lingyuan, Lucas, Christine A., Greenberg, Michael J., Martel, Nick, Leong, Gary M., Hughes, William E., Cooney, Gregory J., James, David E., Ostap, E. Michael, Han, Weiping, Gunning, Peter W. and Hardeman, Edna C. (2015) An actin filament population defined by the tropomyosin Tpm3.1 regulates glucose uptake. Traffic, . doi:10.1111/tra.12282 3   0
Miranda, L. P., Meutermans, W. D. F., Smythe, M. L. and Alewood, P.F. (2000) An Activated O N Acyl Transfer Auxiliary: Efficient Amide-Backbone Substitution of Hindered "Difficult" Peptides. Journal of Organic Chemistry, 65 18: 5460-5468. doi:10.1021/jo991340+ 133   33 Cited 37 times in Scopus37 0
Bradbury, J. F., Myers, S. and Oliver, C. (2004) An adaptogenic role for omega-3 fatty acids in stress; a randomised placebo controlled double blind intervention study (pilot) [ISRCTN22569553]. Nutrition Journal, 3 20: 1-10. doi:10.1186/1475-2891-3-20 69   Cited 17 times in Scopus17 1
Haroon, Mohamed F., Hu, Shihu, Shi, Ying, Imelfort, Michael, Keller, Jurg, Hugenholtz, Philip, Yuan, Zhiguo and Tyson, Gene W. (2013) Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage. Nature, 500 7464: 567-570. doi:10.1038/nature12375 105   45 Cited 52 times in Scopus52 30
Deuis, Jennifer R., Lim, Yu Ling, Rodrigues de Sousa, Silmara, Lewis, Richard J., Alewood, Paul F., Cabot, Peter J. and Vetter, Irina (2014) Analgesic effects of clinically used compounds in novel mouse models of polyneuropathy induced by oxaliplatin and cisplatin. Neuro-Oncology, 16 10: 1324-1332. doi:10.1093/neuonc/nou048 44   0 1
Berecki, G., Motin, L., Haythornthwaite, A., Vink, S., Bansal, P., Drinkwater, R., Wang, C. I., Moretta, M., Lewis, R. J., Alewood, P. F., Christie, M. J. and Adams, D. J. (2009) Analgesic omega-conotoxins CVIE and CVIF selectively and voltage dependently block recombinant and native N-type calcium channels. Molecular Pharmacology, 77 2: 139-148. doi:10.1124/mol.109.058834 142   24 Cited 23 times in Scopus23 0
Zimmermann, Katharina, Deuis, Jennifer R., Inserra, Marco C., Collins, Lindon S., Namer, Barbara, Cabot, Peter J., Reeh, Peter W., Lewis, Richard J. and Vetter, Irina (2013) Analgesic treatment of ciguatoxin-induced cold allodynia. Pain, 154 10: 1999-2006. doi:10.1016/j.pain.2013.06.015 45 30 5 Cited 3 times in Scopus3 1
Huestis, Robert, Cloonan, Nicole, Tchavtchitch, Marina and Saul, Allan (2001) An algorithm to predict 3 ' intron splice sites in Plasmodium falciparum genomic sequences. Molecular And Biochemical Parasitology, 112 1: 71-77. doi:10.1016/S0166-6851(00)00347-9 45   7 Cited 6 times in Scopus6 0
Beznoussenkoi, Galina V., Dolgikh, Viacheslav V., Seliverstova, Elena V., Semenov, Petr B., Tokarev, Yuri S., Trucco, Alvar, Micaroni, Massimo, Di Giandomenico, Daniele, Auinger, Peter, Senderskiy, Igor V., Skarlato, Sergei O., Snigirevskaya, Ekaterina S. and et al. (2007) Analogs of the Golgi complex in microsporidia: Structure and avesicular mechanisms of function. Journal of Cell Science, 120 7: 1288-1298. doi:10.1242/jcs.03402 86   27 Cited 32 times in Scopus32 0
Han, Siew-Ping and Yap, Alpha S. (2013) An alpha-catenin deja vu. Nature Cell Biology, 15 3: 238-239. doi:10.1038/ncb2700 51   1 Cited 1 times in Scopus1 1
Groenen, Martien A. M., Archibald, Alan L., Uenishi, Hirohide, Tuggle, Christopher K., Takeuchi, Yasuhiro, Rothschild, Max F., Rogel-Gaillard, Claire, Park, Chankyu, Milan, Denis, Megens, Hendrik-Jan, Li, Shengting, Larkin, Denis M., Kim, Heebal, Frantz, Laurent A. F., Caccamo, Mario, Ahn, Hyeonju, Aken, Bronwen L., Anselmo, Anna, Anthon, Christian, Auvil, Loretta, Badaoui, Bouabid, Beattie, Craig W., Bendixen, Christian, Berman, Daniel, Blecha, Frank, Blomberg, Jonas, Bolund, Lars, Bosse, Mirte, Botti, Sara, Zhan Bujie, Bystrom, Megan, Capitanu, Boris, Carvalho-Silva, Denise, Chardon, Patrick, Chen, Celine, Cheng, Ryan, Choi, Sang-Haeng, Chow, William, Clark, Richard C., Clee, Christopher, Crooijmans, Richard P. M. A., Dawson, Harry D., Dehais, Patrice, De Sapio, Fioravante, Dibbits, Bert, Drou, Nizar, Du, Zhi-Qiang, Eversole, Kellye, Fadista, Joao, Fairley, Susan, Faraut, Thomas, Faulkner, Geoffrey J., Fowler, Katie E., Fredholm, Merete, Fritz, Eric, Gilbert, James G. R., Giuffra, Elisabetta, Gorodkin, Jan, Griffin, Darren K., Harrow, Jennifer L., Hayward, Alexander, Howe, Kerstin, Hu, Zhi-Liang, Humphray, Sean J., Hunt, Toby, Hornshoj, Henrik, Jeon, Jin-Tae, Jern, Patric, Jones, Matthew, Jurka, Jerzy, Kanamori, Hiroyuki, Kapetanovic, Ronan, Kim, Jaebum, Kim, Jae-Hwan, Kim, Kyu-Won, Kim, Tae-Hun, Larson, Greger, Lee, Kyooyeol, Lee, Kyung-Tai, Leggett, Richard, Lewin, Harris A., Li, Yingrui, Liu, Wansheng, Loveland, Jane E., Lu, Yao, Lunney, Joan K., Ma, Jian, Madsen, Ole, Mann, Katherine, Matthews, Lucy, McLaren, Stuart, Morozumi, Takeya, Murtaugh, Michael P., Narayan, Jitendra, Dinh Truong Nguyen, Ni, Peixiang, Oh, Song-Jung, Onteru, Suneel, Panitz, Frank, Park, Eung-Woo, Park, Hong-Seog, Pascal, Geraldine, Paudel, Yogesh, Perez-Enciso, Miguel, Ramirez-Gonzalez, Ricardo, Reecy, James M., Rodriguez-Zas, Sandra, Rohrer, Gary A., Rund, Lauretta, Sang, Yongming, Schachtschneider, Kyle, Schraiber, Joshua G., Schwartz, John, Scobie, Linda, Scott, Carol, Searle, Stephen, Servin, Bertrand, Southey, Bruce R., Sperber, Goran, Stadler, Peter, Sweedler, Jonathan V., Tafer, Hakim, Thomsen, Bo, Wali, Rashmi, Wang, Jian, Wang, Jun, White, Simon, Xu, Xun, Yerle, Martine, Zhang, Guojie, Zhang, Jianguo, Zhang, Jie, Zhao, Shuhong, Rogers, Jane, Churcher, Carol and Schook, Lawrence B. (2012) Analyses of pig genomes provide insight into porcine demography and evolution. Nature, 491 7424: 393-398. doi:10.1038/nature11622 102   201 Cited 196 times in Scopus196 279
Zhang, P and Kumar, (2006). Analysing feature significance from various systems diagnosis. In: M. Mohammadian, CIMCA 2006 International Conference on Computational Intelligence for Modelling, Control and Automation. International Conference on Computational Intelligence for ..., Sydney, Australia, (1-6). 29 November - 1 December 2006. 43  
Kaas, Quentin and Craik, David J. (2010). Analysis and classification of circular proteins in CyBase. In: International Conference on Circular Proteins. 1st International Conference on Circular Proteins, Heron Island, Qld, Australia, (584-591). 18-21 October, 2009. doi:10.1002/bip.21424 97 2 29 Cited 27 times in Scopus27 0
Melvin, D. R., Marsh, B. J., Walmsley, A. R., James, D. and Gould, G. W. (1999) Analysis of amino and carboxy terminal GLUT-4 targeting motifs in 3T3-L1 adipocytes using an endosomal ablation technique. Biochemistry, 38 5: 1456-1462. doi:10.1021/bi980988y 35   29 Cited 30 times in Scopus30 0
Watson, Michael, Pérez-Alegre, Mónica, Baron, Michael Denis, Delmas, Céline, Dovč, Peter, Duval, Mylène, Foulley, Jean-Louis, Garrido-Pavón, Juan José, Hulsegge, Ina, Jaffrézic, Florence, Jiménez-Marín, Ángeles, Lavrič, Miha, Lê Cao, Kim-Anh, Marot, Guillemette, Mouzaki, Daphné, Pool, Marco H., Robert-Granié, Christèle, San Cristobal, Magali, Tosser-Klopp, Gwenola, Waddington, David and de Koning, Dirk-Jan (2007) Analysis of a simulated microarray dataset: Comparison of methods for data normalisation and detection of differential expression (Open Access publication). Genetics Selection Evolution, 39 6: 669-683. doi:10.1051/gse:2007031 113   2 Cited 3 times in Scopus3 0
Smart, C.E., Wronski, A., French, J.D., Edwards, S.L., Asselin-Labat, M.L., Waddell, N., Peters, K., Brewster, B.L., Brooks, K., Simpson, K., Manning, N., Lakhani, S.R., Grimmond, S., Lindeman, G.J., Visvader, J.E. and Brown, M.A. (2011) Analysis of brca1-deficient mouse mammary glands reveals reciprocal regulation of Brca1 and c-kit. Oncogene, 30 13: 1597-1607. doi:10.1038/onc.2010.538 126   8 Cited 8 times in Scopus8 0
Ma, Linlin, Rychkov, Grigori Y., Hughes, Bernard P. and Bretag, Allan H. (2008) Analysis of carboxyl tail function in the skeletal muscle Cl− channel hClC-1. Biochemical Journal, 413 Part 1: 61-69. doi:10.1042/BJ20071489 44   3 Cited 4 times in Scopus4 0
Mattei, Cesar, Marquais, Michel, Schlumberger, Sebastien, Molgo, Jordi, Vernoux, Jean-Paul, Lewis, Richard J. and Benoit, Evelyne (2010) Analysis of Caribbean ciguatoxin-1 effects on frog myelinated axons and the neuromuscular junction. Toxicon, 56 5: 759-767. doi:10.1016/j.toxicon.2009.07.026 125   4 Cited 4 times in Scopus4 0
Nicke, A, Lorinczi, Eva, Dutertre, Sebastien and Rettinger, J (2012). Analysis of conformational changes during P2X1 receptor activation and desensitization by voltage clamp fluorometry. In: Abstracts of the Fourth Joint German-Italian Purine Club Meeting 2011. Fourth Joint German-Italian Purine Club Meeting 2011, Bonn, Germany, (119-119). 22-25 July 2011. 34   0
Cook, Anthony L., Chen, Wei, Thurber, Amy E., Smit, Darren J., Smith, Aaron G., Bladen, Timothy G., Brown, Darren L., Duffy, David L., Pastorino, Lorenza, Bianchi-Scarra, Giovanna, Leonard, J. Helen, Stow, Jennifer L. and Sturm, Richard A. (2009) Analysis of Cultured Human Melanocytes Based on Polymorphisms within the SLC45A2/MATP, SLC24A5/NCKX5, and OCA2/P Loci. Journal of Investigative Dermatology, 129 2: 392-405. doi:10.1038/jid.2008.211 99   40 Cited 44 times in Scopus44 18

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