Institute for Molecular Bioscience - Publications

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Traylor, Ryan N., Bruno, Damien L., Burgess, Trent, Wildin, Robert, Spencer, Anne, Ganesamoorthy, Devika, Amor, David J., Hunter, Matthew, Caplan, Michael, Rosenfeld, Jill A., Theisen, Aaron, Torchia, Beth S., Shaffer, Lisa G., Ballif, Blake C. and Slater, Howard R. (2010) A genotype-first approach for the molecular and clinical characterization of uncommon de novo microdeletion of 20q13.33. PLoS ONE, 5 8: e12462.1-e12462.7. doi:10.1371/journal.pone.0012462 19   13 Cited 15 times in Scopus15 0
Tachas, G., Lofthouse, S., Wraight, C. J., Baker, B. F., Sioufi, N. B., Jarres, R. A., Berdeja, A., Rao, A. M., Kerr, L. M., d'Aniello, E. M. and Waters, M. J. (2006) A GH receptor antisense oligonucleotide inhibits hepatic GH receptor expression, lGF-I production and body weight gain in normal mice. Journal of Endocrinology, 189 1: 147-154. doi:10.1677/joe.1.06553 103   12 Cited 11 times in Scopus11 0
The 1000 Genomes Project Consortium and Coin, Lachlan (2015) A global reference for human genetic variation. Nature, 526 7571: 68-74. doi:10.1038/nature15393     11 Cited 20 times in Scopus20 580
Perkins, Andrew C., Coghill, Elise, Maguire, Tina, Hartmann, Belinda, McDowall, Alasdair, Weiss, Mitchell, Grimmond, Sean, Keys, Janelle and Hodge, Denise (2005). A global role for EKLF in definitive and primitive erythropoiesis. In: Blood. ASH Annual Meeting Abstracts. 47th American Society of Hematology Annual Meeting, New Orleans, USA, (496A-496A). 3-6 December 2005. 213   Cited 1 times in Scopus1
Hodge, Denise, Coghill, Elise, Keys, Janelle, Maguire, Tina, Hartmann, Belinda, McDowall, Alasdair, Weiss, Mitchell, Grimmond, Sean and Perkins, Andrew C. (2006) A global role for EKLF in definitive and primitive erythropoiesis. Blood, 107 8: 3359-3370. doi:10.1182/blood-2005-07-2888 131   123 Cited 119 times in Scopus119 3
Tallack, Michael R., Whitington, Tom, Yuen, Wai Shan, Wainwright, Elanor N., Keys, Janelle R., Gardiner, Brooke B., Nourbakhsh, Ehsan, Cloonan, Nicole, Grimmond, Sean M., Bailey, Timothy L. and Perkins, Andrew C. (2010) A global role for KLF1 in erythropoiesis revealed by ChIP-seq in primary erythroid cells. Genome Research, 20 8: 1052-1063. doi:10.1101/gr.106575.110 97 90 90 Cited 92 times in Scopus92 1
Gardiner, M. R., Gongora, M. M., Grimmond, S. M. and Perkins, A. C. (2007) A global role for zebrafish klf4 in embryonic erythropoiesis. Mechanisms of Development, 124 9-10: 762-774. doi:10.1016/j.mod.2007.06.005 147   26 Cited 29 times in Scopus29 3
Mattick, John S., Taft, Ryan J. and Faulkner, Geoffrey J. (2010) A global view of genomic information - moving beyond the gene and the master regulator. Trends in Genetics, 26 1: 21-28. doi:10.1016/j.tig.2009.11.002 77   84 Cited 109 times in Scopus109 1
Chen, Nathan H., Couñago, Rafael M., Djoko, Karrera Y., Jennings, Michael P., Apicella, Michael A., Kobe, Bostjan and McEwan, Alastair G. (2013) A glutathione-dependent detoxification system is required for formaldehyde resistance and optimal survival of Neisseria meningitidis in biofilms. Antioxidants and Redox Signaling, 18 7: 743-755. doi:10.1089/ars.2012.4749 187 63 4 Cited 4 times in Scopus4 0
Sturm, Richard A. (2006) A golden age of human pigmentation genetics. Trends In Genetics, 22 9: 464-468. doi:10.1016/j.tig.2006.06.010 128   48 Cited 57 times in Scopus57 9
Barry, GD, Le, GT and Fairlie, DP (2006) Agonists and antagonists of protease activated receptors (PARs). Current Medicinal Chemistry, 13 3: 243-265. doi:10.2174/092986706775476070 234   48 Cited 48 times in Scopus48 0
Bustamam, Alhadi, Burrage, Kevin and Hamilton, Nicholas A. (2010). A GPU implementation of fast parallel Markov clustering in Bioinformatics using ELLPACK-R sparse data format. In: Juan E. Guerrero, Proceedings of the 2nd International Conference on Advances in Computing, Control and Telecommunication Technologies. ACT 2010, Jakarta, Indonesia, (173-175). 2 - 3 December, 2010. doi:10.1109/ACT.2010.10 166 4 Cited 1 times in Scopus1 0
Darwen, PJ, Tran, TT, Bourne, GT, Nielson, JL and Smythe, ML (2006) A gradient descent algorithm for minimizing amino acid coupling reactions when synthesizing cyclic-peptide libraries. Combinatorial Chemistry & High Throughput Screening, 9 7: 559-563. doi:10.2174/138620706777935333 113   0 0 0
Smout, M. J., Laha, T, Mulvenna, J, Sripa, B, Suttiprapa, S, Jones, A, Brindley, PJ and Loukas, A (2009) A Granulin-Like Growth Factor Secreted by the Carcinogenic Liver Fluke, Opisthorchis viverrini, Promotes Proliferation of Host Cells. PLoS Pathogens, 5 10: x-x. doi:10.1371/journal.ppat.1000611 91   55 Cited 59 times in Scopus59 3
Stow, J. L., Dealmeida, J. B., Narula, N., Holtzman, E. J., Ercolani, L. and Ausiello, D. A. (1991) A heterotrimeric G protein, G alpha i-3, on Golgi membranes regulates the secretion of a heparan sulfate proteoglycan in LLC-PK1 epithelial cells. Journal of Cell Biology, 114 6: 1113-1124. doi:10.1083/jcb.114.6.1113 33   271 0
Lee, H., Hwang, J., Duggleby, R. G., Winzor, D. J., Smith, R. W. and Kroon, P. A. (2000). A high affinity calcium binding site determines the folding efficiency of a ligand-binding modul of the human low density lipoprotein receptor. In: ComBio 2000 : combined conference abstracts : 44th Annual ASBMB, 40th Annual ASPP, Annual NZSBMB, 22nd Annual NZSPP. Combio 2000, Wellington, New Zealand, (1-58). 11-14 December, 2000. 70  
Richette, Pascal, François, Mathias, Vicaut, Eric, Fitting, Catherine, Bardin, Thomas, Corvol, Maїté, Savouret, Jean-François and Rannou, François (2008) A high interleukin 1 receptor antagonist/IL-1beta ratio occurs naturally in knee osteoarthritis. Journal of Rheumatology, 35 8: 1650-1654. 77   23 Cited 26 times in Scopus26
Himes, S. R., Tagoh, H., Goonetilleke, N., Sasmono, T., Oceandy, D., Clark, R., Bonifer, C. and Hume, D. A. (2001) A highly conserved c-fms gene intronic element controls macrophage-specific and regulated expression. Journal of Leukocyte Biology, 70 5: 812-820. 76   50
Ali, Naveid, Jurczyluk, Julie, Shay, Gemma, Tnimov, Zakir, Alexandrov, Kirill, Munoz, Marcia A., Skinner, Oliver P., Pavlos, Nathan J. and Rogers, Michael J. (2015) A highly sensitive prenylation assay reveals in vivo effects of bisphosphonate drug on the Rab prenylome of macrophages outside the skeleton. Small GTPases, 6 4: . doi:10.1080/21541248.2015.1085485     0
Little, Melissa H., Brennan, Jane, Georgas, Kylie, Davies, Jamie A., Davidson, Duncan R., Baldock, Richard A., Beverdam, Annemiek, Bertram, John F., Capel, Blanche, Chiu, Han Sheng, Clements, Dave, Cullen-McEwen, Luise, Fleming, Jean, Gilbert, Thierry, Herzlinger, Doris, Houghton, Derek, Kaufman, Matt H., Kleymenova, Elena, Koopman, Peter A., Lewis, Alfor G., McMahon, Andrew P., Mendelsohn, Cathy L., Mitchell, Eleanor K., Rumballe, Bree A., Sweeney, Derina E., Valerius, M. Todd, Yamada, Gen, Yang, Yiya and Yu, Jing (2007) A high-resolution anatomical ontology of the developing murine genitourinary tract. Gene Expression Patterns, 7 6: 680-699. doi:10.1016/j.modgep.2007.03.002 172   53 Cited 63 times in Scopus63 0
Little, MH, Brennan, J, Georgas, K, Davies, JA, Davidson, DR, Baldock, RA, Beverdam, A, Bertram, JF, Capel, B, Chiu, HS, Clements, D, Cullen-McEwen, L, Fleming, J, Gilbert, T, Herzlinger, D, Houghton, D, Kaufman, MH, Kleymenova, E, Koopman, PA, Lewis, AG, McMahon, AP, Mendelsohn, CL, Mitchell, EK, Rumballe, BA, Sweeney, DE, Valerius, MT, Yamada, G, Yang, Y and Yu, J (2007) A high-resolution anatomical ontology of the developing murine genitourinary tract (vol 7, pg 680, 2007). Gene Expression Patterns, 8 1: 47-50. doi:10.1016/j.modgep.2007.07.003 52   0 Cited 1 times in Scopus1 0
McBride, Jeffrey D. and Cooper, Matthew A. (2008) A high sensitivity assay for the inflammatory marker C-Reactive protein employing acoustic biosensing. Journal of Nanobiotechnology, 6 5: 134-8. doi:10.1186/1477-3155-6-5 83   Cited 17 times in Scopus17 0
Bagriantsev S.N., Ang K.-H., Gallardo-Godoy A., Clark K.A., Arkin M.R., Renslo A.R. and Minor D.L. (2013) A high-throughput functional screen identifies small molecule regulators of temperature- and mechano-sensitive K2P channels. ACS Chemical Biology, 8 8: 1841-1851. doi:10.1021/cb400289x 16   10 Cited 15 times in Scopus15 0
Felitti, S. A., Tian, P, Edwards, D. and et al. (2005). A high-throughput gene silencing approach for studying the interaction between perennial ryegrass (Lolium perenne) and the fungal endophyte Neotyphodium lolii. In: M.O. Humphreys, Molecular Breeding for the Genetic Improvement of Forage Crops and Turf : Proceedings of the 4th International Symposium on the Molecular Breeding of Forage and Turf, a satellite workshop of the XXth International Grassland Congress. 4th International Symposium on the Molecular Breeding of Forage and Turf, Aberystwyth, Wales, (215). 3-7 July, 2005. 119  
Škalamera, Dubravka, Ranall, Max V., Wilson, Benjamin M., Leo, Paul, Purdon, Amy S., Hyde, Carolyn, Nourbakhsh, Ehsan, Grimmond, Sean M., Barry, Simon C., Gabrielli, Brian and Gonda, Thomas J. (2011) A high-throughput platform for lentiviral overexpression screening of the human ORFeome. PLoS One, 6 5: e20057.1-e20057.14. doi:10.1371/journal.pone.0020057 142 93 22 Cited 21 times in Scopus21 0
Nagaraj, Shivashankar H., Gasser, Robin B. and Ranganathan, Shoba (2007) A hitchhiker's guide to expressed sequence tag (EST) analysis. Briefings in Bioinformatics, 8 1: 6-21. doi:10.1093/bib/bbl015 56   122 Cited 156 times in Scopus156 3
Lin, Min-Hsuan, Sivakumaran, Haran, Jones, Alun, Li, Dongsheng, Harper, Callista, Wei, Ting, Jin, Hongping, Rustanti, Lina, Meunier, Frederic A., Spann, Kirsten and Harrich, David (2014) A HIV-1 Tat mutant protein disrupts HIV-1 Rev function by targeting the DEAD-box RNA helicase DDX1. Retrovirology, 11 1: 121.1-121.16. doi:10.1186/s12977-014-0121-9 35   1 Cited 2 times in Scopus2 0
Ender, Christine, Krek, Azra, Friedlaender, Marc R., Beitzinger, Michaela, Weinmann, Lasse, Chen, Wei, Pfeffer, Sebastien, Rajewsky, Nikolaus and Meister, Gunter (2008) A human snoRNA with microRNA-like functions. Molecular Cell, 32 4: 519-528. doi:10.1016/j.molcel.2008.10.017 36   354 Cited 363 times in Scopus363 4
Harlow, Timothy J., Gogarten, J. Peter and Ragan, Mark A. (2004) A hybrid clustering approach to recognition of protein families in 114 microbial genomes. Bmc Bioinformatics, 5 Article 45. doi:10.1186/1471-2105-5-45 86   27 Cited 34 times in Scopus34 0
Sagulenko, V., Thygesen, S. J., Sester, D. P., Idris, A., Cridland, J. A., Vajjhala, P. R., Roberts, T., Schroder, K., Vince, J. E., Hill, J. M., Silke, J. and Stacey, K. J. (2013) AIM2 and NLRP3 inflammasomes activate both apoptotic and pyroptotic death pathways via ASC. Cell Death and Differentiation, 20 9: 1149-1160. doi:10.1038/cdd.2013.37 113   67 Cited 69 times in Scopus69 0
Cooper, M. A. (2002) Akubio: Label-free screening of molecular interactions using acoustic detection. Drug Discovery Today, 7 5: S5-S7. 53  
Teasdale, R. D., Loci, D., Houghton, F., Karlsson, L. and Gleeson, P. A. (2001) A large family of endosome-localized proteins related to sorting nexin 1. Biochemical Journal, 358 1: 7-16. doi:10.1042/0264-6021:3580007 107   96 Cited 96 times in Scopus96 3
Jackson, Lauren P., Kelly, Bernard T., McCoy, Airlie J., Gaffry, Thomas, James, Leo C., Collins, Brett M., Honing, Stefan, Evans, Philip R. and Owen, David J. (2010) A large-scale conformational change couples membrane recruitment to cargo binding in the AP2 clathrin adaptor complex. Cell, 141 7: 1220-1229. doi:10.1016/j.cell.2010.05.006 68   115 Cited 121 times in Scopus121 1
Tang, Huayang, Jin, Xin, Li, Yang, Jiang, Hui, Tang, Xianfa, Yang, Xu, Cheng, Hui, Qiu, Ying, Chen, Gang, Mei, Junpu, Zhou, Fusheng, Wu, Renhua, Zuo, Xianbo, Zhang, Yong, Zheng, Xiaodong, Cai, Qi, Yin, Xianyong, Quan, Cheng, Shao, Haojing, Cui, Yong, Tian, Fangzhen, Zhao, Xia, Liu, Hong, Xiao, Fengli, Xu, Fengping, Han, Jianwen, Shi, Dongmei, Zhang, Anping, Zhou, Cheng, Li, Qibin, Fan, Xing, Lin, Liya, Tian, Hongqing, Wang, Zaixing, Fu, Huiling, Wang, Fang, Yang, Baoqi, Huang, Shaowei, Liang, Bo, Xie, Xuefeng, Ren, Yunqing, Gu, Qingquan, Wen, Guangdong, Sun, Yulin, Wu, Xueli, Dang, Lin, Xia, Min, Shan, Junjun, Li, Tianhang, Yang, Lin, Zhang, Xiuyun, Li, Yuzhen, He, Chundi, Xu, Aie, Wei, Liping, Zhao, Xiaohang, Gao, Xinghua, Xu, Jinhua, Zhang, Furen, Zhang, Jianzhong, Li, Yingrui, Sun, Liangdan, Liu, Jianjun, Chen, Runsheng, Yang, Sen, Wang, Jun and Zhang, Xuejun (2014) A large-scale screen for coding variants predisposing to psoriasis. Nature Genetics, 46 45-50. doi:10.1038/ng.2827 10   28 Cited 31 times in Scopus31 63
Hagman, M., Hayes R. A., Capon, R. J. and Shine, R. (2009) Alarm cues experienced by cane toad tadpoles affect post-metamorphic morphology and chemical defences. Functional Ecology, 23 1: 126-132. doi:10.1111/j.1365-2435.2008.01470.x 77   30 Cited 34 times in Scopus34 0
Mylne, Joshua S., Colgrave, Michelle L., Daly, Norelle L., Chanson, Aurelie H., Elliott, Alysha G., McCallum, Emily J., Jones, Alun and Craik, David J. (2011) Albumins and their processing machinery are hijacked for cyclic peptides in sunflower. Nature Chemical Biology, 7 5: 257-259. doi:10.1038/nchembio.542 88   46 Cited 41 times in Scopus41 0
Burcham, Philip C., Kaminskas, Lisa M., Fontaine, Frank R., Petersen, Dennis R. and Pyke, Simon M. (2002) Aldehyde-Sequestering Drugs: Tools for Studying Protein Damage by Lipid Peroxidation Products. Toxicology, 181-182 229-236. doi:10.1016/S0300-483X(02)00287-1 58   66 Cited 67 times in Scopus67 0
Cloonan, Nicole, Fischer, Katja, Cheng, Qin and Saul, Allan (2001) Aldolase genes of Plasmodium species. Molecular And Biochemical Parasitology, 113 2: 327-330. doi:10.1016/S0166-6851(01)00226-2 73   8 Cited 8 times in Scopus8 0
Funder, John W. (2007). Aldosterone and Other Steroids. In Gregory Y. H. Lip and John E. Hall (Ed.), Comprehensive Hypertension (pp. 291-297) Philadelphia, PA United States: Mosby Elsevier. 33   0
Le, T., Blair, D. and McManus, D. P. (2001) A leucine zipper protein of mitochondrial origin. Biochimica et Biophysica Acta, 1546 2: 435-443. doi:10.1016/S0167-4838(01)00156-X 42   9 Cited 9 times in Scopus9 0
Stephens, Evan, de Nys, Rocky, Ross, Ian L. and Hankamer, Ben (2013) Algae fuels as an alternative to petroleum. Journal of Petroleum and Environmental Biotechnology, 4 4: 1000148.1-1000148.7. doi:10.4172/2157-7463.1000148 93 4 0
Wong, Emily S. W., Papenfuss, Anthony T., Whittington, Camilla M., Warren, Wesley C. and Belov, Katherine (2012) A limited role for gene duplications in the evolution of platypus venom. Molecular Biology and Evolution, 29 1: 167-177. doi:10.1093/molbev/msr180 47   17 Cited 16 times in Scopus16 0
Straube, Jasmin, Gorse, Alain-Dominique, Huang, Bevan Emma and Le Cao, Kim-Anh (2015) A Linear Mixed Model Spline Framework for Analysing Time Course 'Omics' Data. PLoS One, 10 8: e0134540-e0134540. doi:10.1371/journal.pone.0134540 4   0 0 4
Williams, Simon J., Ve, Thomas and Kobe, Bostjan (2015) A linker strategy for the production and crystallization of Toll/interleukin-1 receptor/resistance protein domain complexes. Protein Engineering, Design and Selection, 28 5: 137-145. doi:10.1093/protein/gzv013 13   1 Cited 1 times in Scopus1 1
Olive, Colleen, Batzloff, Michael R., Horvath, Aniko, Wong, Allan, Clair, Timothy, Yarwood, Penny, Toth, Istvan and Good, Michael F. (2002) A lipid core peptide construct containing a conserved region determinant of the group a streptococcal M protein elicits heterologous opsonic antibodies. Infection And Immunity, 70 5: 2734-2738. doi:10.1128/IAI.70.5.2734-2738.2002 78   44 Cited 46 times in Scopus46 3
Joziasse, Irene C., Smith, Kelly A., Chocron, Sonja, van Dinther, Maarten, Guryev, Victor, van de Smagt, Jasper J., Cuppen, Edwin, ten Dijke, Peter, Mulder, Barbara J. M., Maslen, Cheryl L., Reshey, Benjamin, Doevendans, Pieter A. and Bakkers, Jeroen (2011) ALK2 mutation in a patient with Down's syndrome and a congenital heart defect. European Journal of Human Genetics, 19 4: 389-393. doi:10.1038/ejhg.2010.224 16   11 Cited 10 times in Scopus10 0
Xu, You-Kai, Yang, Sheng-Ping, Liao, Shang-Gao, Zhang, Hua, Lin, Li-Ping, Ding, Jian and Yue, Jian-Min (2006) Alkaloids from Gelsemium elegans. Journal of Natural Products, 69 9: 1347-1350. doi:10.1021/np060156y 301   29 Cited 31 times in Scopus31 0
Quinlan, Kgr, Seto, JT, Turner, N, Floetenmeyer, M, Macarthur, DG, Raftery, JM, Yang, N, Parton, RG, Cooney, GJ and North, KN (2009). alpha-Actinin-3 regulates muscle glycogen phosphorylase: A potential mechanism for the metabolic consequences of the common human null allele of ACTN3. In: Neuromuscular Disorders. 14th International Congress of the World-Muscle-Society, Geneva Switzerland, (545-546). Sep 09-12, 2009. doi:10.1016/j.nmd.2009.06.011 59   0 0
Barry, Adrienne K., Tabdili, Hamid, Muhamed, Ismaeel, Wu, Jun, Shashikanth, Nitesh, Gomez, Guillermo A., Yap, Alpha S., Gottardi, Cara J., de Rooij, Johan, Wang, Ning and Leckband, Deborah E. (2014) alpha-Catenin cytomechanics: role in cadherin-dependent adhesion and mechanotransduction. Journal of Cell Science, Advance Online Article 8: 1-42. doi:10.1242/jcs.139014 37   21 Cited 19 times in Scopus19 1
Broxton, NM, Down, JG, Gehrman, J, Alewood, PF, Satchell, DG and Livett, BG (1999) alpha-Conotoxin ImI inhibits the alpha-bungarotoxin-resistant nicotinic response in bovine adrenal chromaffin cells. Journal of Neurochemistry, 72 4: 1656-1662. doi:10.1046/j.1471-4159.1999.721656.x 126   20 Cited 22 times in Scopus22 0

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