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Timmins, Matthew, Thomas-Hall, Skye R., Darling, Aaron, Zhang, Eugene, Hankamer, Ben, Marx, Ute C and Schenk, Peer M. (2009) Phylogenetic and molecular analysis of hydrogen-producing green algae. Journal of Experimental Botany, 60 6: 1691-1702. doi:10.1093/jxb/erp052 73   33 Cited 37 times in Scopus37 0
Thomas-Hall, Skye, Campbell, Paul R., Carlens, Katrien, Kawanishi, Emi, Swennen, Rony, Sagi, László and Schenk, Peer M. (2007) Phylogenetic and molecular analysis of the ribulose-1,5-bisphosphate carboxylase small subunit gene family in banana. Journal of Experimental Botany, 58 10: 2685-2697. doi:10.1093/jxb/erm129 89   9 Cited 7 times in Scopus7 0
Sohani, M. M., Schenk, P. M. P., Schultz, C. J. and Schmidt, O. (2009) Phylogenetic and transcriptional analysis of a strictosidine synthase-like gene family in Arabidopsis thaliana reveals involvement in plant defence responses. Plant Biology, 11 1: 105-117. doi:10.1111/j.1438-8677.2008.00139.x 249   13 Cited 13 times in Scopus13 0
Crisp, Michael D., Arroyo, Mary T. K., Cook, Lyn G., Gandalfo, Maria A., Jordan, Gregory J., McGlone, Matt S., Weston, Peter H., Westoby, Mark, Wilf, Peter and Linder, H. Peter (2009) Phylogenetic biome conservatism on a global scale. Nature, 458 7239: 754-756. doi:10.1038/nature07764 103   254 Cited 261 times in Scopus261 1
Arregoitia, Luis Darcy Verde, Blomberg, Simon P. and Fisher, Diana O. (2013) Phylogenetic correlates of extinction risk in mammals: species in older lineages are not at greater risk. Proceedings of the Royal Society B: Biological Sciences, 280 1765: 20131092.1-20131092 .7. doi:10.1098/rspb.2013.1092 56   9 Cited 12 times in Scopus12 5
Polymeropoulos, E. T., Heldmaier, G., Frappell, P. B., McAllan, B. M., Withers, K. W., Klingenspor, M., White, C. R. and Jastroch, M. (2012) Phylogenetic differences of mammalian basal metabolic rate are not explained by mitochondrial basal proton leak. Proceedings of the Royal Society of London: Biological Sciences, 279 1726: 185-193. doi:10.1098/rspb.2011.0881 51   9 Cited 8 times in Scopus8 0
Rosauer, D, Laffan, S.W., Crisp, M.D., Dannellan, S.C. and Cook, L. (2009) Phylogenetic endemism: a new approach for identifying geographical concentrations of evolutionary history. Molecular Ecology, 18 19: 4061-4072. doi:10.1111/j.1365-294X.2009.04311.x 80   75 Cited 85 times in Scopus85 5
Crisp, Michael D. and Cook, Lyn G. (2012) Phylogenetic niche conservatism: what are the underlying evolutionary and ecological causes?. New Phytologist, 196 3: 681-694. doi:10.1111/j.1469-8137.2012.04298.x 41   55 Cited 54 times in Scopus54 2
Barker, S. C., Blair, D., Cribb, T. H. and Tonion, K. (1993) Phylogenetic position of Heronimus mollis (digenea): Evidence from 18S ribosomal RNA. International Journal for Parasitology, 23 4: 533-536. doi:10.1016/0020-7519(93)90043-X 31   18 Cited 17 times in Scopus17 0
Gleeson, R. J. and Adlard, R. D. (2012) Phylogenetic relationships amongst Chloromyxum Mingazzini, 1890 (Myxozoa: Myxosporea), and the description of six novel species from Australian elasmobranchs. Parasitology International, 61 2: 267-274. doi:10.1016/j.parint.2011.10.008 43   10 Cited 14 times in Scopus14 0
Mcguigan, K., Zhu, D., Allen, G. R. and Moritz, C. C. (2000) Phylogenetic relationships and historical biogeography of melanotaenlid fishes in Australia and New Guinea. Marine Freshwater Research, 51 7: 713-723. doi:10.1071/MF99159 92   55 Cited 54 times in Scopus54 0
Cutmore, Scott C., Miller, Terrence L., Curran, Stephen S., Bennett, Michael B. and Cribb, Thomas H. (2013) Phylogenetic relationships of the Gorgoderidae (Platyhelminthes: Trematoda), including the proposal of a new subfamily (Degeneriinae n. subfam.). Parasitology Research, 112 8: 3063-3074. doi:10.1007/s00436-013-3481-5 50   16 Cited 17 times in Scopus17 0
Melville, Jane, Shoo, Luke P. and Doughty, Paul (2008) Phylogenetic relationships of the heath dragons (Rankinia adelaidensis and R. parviceps) from the south-western Australian biodiversity hotspot. Australian Journal of Zoology, 56 3: 159-171. doi:10.1071/ZO07069 37   10 Cited 11 times in Scopus11 0
Winterton, Shaun L, Yang, Longlong, Wiegmann, Brian M. and Yeates, David K. (2001) Phylogenetic revision of Agapophytinae subf.n. (Diptera : Therevidae) based on molecular and morphological evidence. Systematic Entomology, 26 2: 173-211. doi:10.1046/j.1365-3113.2001.00142.x 44   38 Cited 35 times in Scopus35 0
Winterton, Shaun L. and Irwin, Michael E. (2001) Phylogenetic revision of Agapophytus Guerin (Diptera : Therevidae : Agapophytinae). Invertebrate Taxonomy, 15 4: 467-526. doi:10.1071/IT00027 31   7 0 0
Winterton, S. L., Skevington, J. H., Irwin, M. and Yeates, D. K. (2000) Phylogenetic revision of Bonjeania Irwin and Lyneborg (Diptera: Therevidae). Systematic Entomology, 25 3: 295-324. doi:10.1046/j.1365-3113.2000.00107.x 25   12 Cited 10 times in Scopus10 0
Bouchard, P. (2002) Phylogenetic revision of the flightless Australian genus Apterotheca Gebien (Coleoptera : Tenebrionidae : Coelometopinae). Invertebrate Systematics, 16 3: 449-554. doi:10.1071/IT01029 58   5 Cited 9 times in Scopus9 0
Winterton, S. L., Irwin, M. E. and Yeates, D. K. (1999) Phylogenetic revision of the Taenogera Krober genus-group (Diptera:Therevidae), with descriptions of two new genera.. Australian Journal of Entomology, 38 274-290. doi:10.1046/j.1440-6055.1999.00126.x 28   30 0
Macqueen, Peggy, Seddon, Jennifer M., Austin, Jeremy J., Hamilton, Steven and Goldizen, Anne W. (2010) Phylogenetics of the pademelons (Macropodidae: Thylogale) and historical biogeography of the Australo-Papuan region. Molecular Phylogenetics and Evolution, 57 3: 1134-1148. doi:10.1016/j.ympev.2010.08.010 111   13 Cited 12 times in Scopus12 0
Downie, Abigail J. and Cribb, Thomas H. (2011) Phylogenetic studies explain the discrepant host distribution of Allopodocotyle heronensis sp nov (Digenea, Opecoelidae) in Great Barrier Reef serranids. Acta Parasitologica, 56 3: 296-300. doi:10.2478/s11686-011-0059-1 65   2 Cited 3 times in Scopus3 0
Naponelli, V., Noiriel, A., Ziemak, M.J., Beverley, S.M., Lye, L-F., Plume, A.M., Botella, J.R., Loizeau, K., Ravanel, S., Rébeillé, F., de Crécy-Lagard, V. and Hanson, A.D. (2008) Phylogenomic and Functional Analysis of Pterin-4a-Carbinolamine Dehydratase Family (COG2154) Proteins in Plants and Microorganisms. Plant Physiology, 146 4: 1515-1527. doi:10.1104/pp.107.114090 58   17 Cited 17 times in Scopus17 0
Cannon, Johanna T., Kocot, Kevin M., Waits, Damien S., Weese, David A., Swalla, Billie J., Santos, Scott R. and Halanych, Kenneth M. (2014) Phylogenomic resolution of the hemichordate and echinoderm clade. Current Biology, 24 23: 2827-2832. doi:10.1016/j.cub.2014.10.016 32   24 Cited 23 times in Scopus23 13
Wu, Martin, Sun, Ling V., Vamathevan, Jessica, Riegler, Markus, Deboy, Robert, Brownlie, Jeremy C., McGraw, Elizabeth A., Martin, William, Esser, Christian, Ahmadinejad, Nahal, Wiegand, Christian, Madupu, Ramana, Beanan, Maureen J., Brinkac, Lauren M., Daugherty, Sean C., Durkin, A. Scott, Kolonay, James F., Nelson, William C., Mohamoud, Yasmin, Lee, Perris, Berry, Kristi, Brook Young, M., Utterback, Teresa, Weidman, Janice, Nierman, William C., Paulsen, Ian T., Nelson, Karen E., Tettelin, Hervé, O'Neill, Scott L. and Eisen, Jonathan A. (2004) Phylogenomics of the Reproductive Parasite Wolbachia pipientis wMel: A Streamlined Genome Overrun by Mobile Genetic Elements. PLoS Biology, 2 3: 0327-0341. doi:10.1371/journal.pbio.0020069 636 400 400 Cited 367 times in Scopus367 47
Philippe, H., Derelle, R., Lopez, P., Pick, K., Borchiellini, C., Boury-Esnault, N., Vacelet, J., Renard, E., Houliston, E., Queinnec, E., Da Silva, C., Wincker, P., Le Guyader, H., Leys, S., Jackson, D. J., Schreiber, F., Erpenbeck, D., Morgenstern, B., Worheide, G. and Manuel, M. (2009) Phylogenomics Revives Traditional Views on Deep Animal Relationships. Current Biology, 19 8: 706-712. doi:10.1016/j.cub.2009.02.052 79   389 Cited 369 times in Scopus369 33
White, Craig (2009). Phylogentically-informed analysis of the universality of metabolic allometry. In: Proceedings of the XXXVI International Congress of Physiological Sciences (IUPS2009). Function of Life: Elements and Integration. IUPS 2009: XXXVI International Congress of Physiological Sciences. Function of Life: Elements and Integration, Kyoto, Japan, (97-97). 27 July-1 August 2009. 89   0
Shull, Heather C., Perez-Losada, Marcos, Blair, David, Sewell, Kim, Sinclair, Elizabeth A., Lawler, Susan, Ponniah, Mark and Crandall, Keith A. (2005) Phylogeny and biogeography of the freshwater crayfish Euastacus (Decapoda : Parastacidae) based on nuclear and mitochondrial DNA. Molecular Phylogenetics And Evolution, 37 1: 249-263. doi:10.1016/j.ympev.2005.04.034 80   31 Cited 38 times in Scopus38 0
Crisp, M. D. and Cook, L. G. (2003). Phylogeny and embryo sac evolution in the endemic Australasian papilionoid tribes Mirbelieae and Bossiaeeae. In B. Klitgaard and A. Bruneau (Ed.), Advances in legume systematics. Pt. 10, Higher level systematics (pp. 253-268) Kew, UK: Kew Publishing. 19  
Crisp, Michael D. and Cook, Lyn G. (2003) Phylogeny and evolution of anomalous roots in Daviesia (Fabaceae : Mirbelieae). International Journal of Plant Sciences, 164 4: 603-612. doi:10.1086/375318 122   5 0 0
Gullan, P. J. and Cook, L. G. (2007) Phylogeny and higher classification of the scale insects (Hemiptera : Sternorrhyncha : Coccoidea). Zootaxa, 1668: 413-425. 293   64 0
Doyle, J. A., Sauquet, H., Scharaschkin, T. and Le Thomas, A. (2004) Phylogeny, molecular and fossil dating, and biogeographic history of Annonaceae and Myristicaceae (Magnoliales). International Journal of Plant Sciences, 165 4 Suppl.: S55-S67. doi:10.1086/421068 260 11 48 0 3
Winterton, Shaun L. and Makarkin, Vladimir N. (2010) Phylogeny of moth lacewings and giant lacewings (Neuroptera: Ithonidae, Polystoechotidae) using DNA sequence data, morphology, and fossils. Annals of the Entomological Society of America, 103 4: 511-522. doi:10.1603/AN10026 86   22 Cited 21 times in Scopus21 3
Jamieson, Barrie G. M., Tillier, Simon, Tillier, Annie, Justine, Jean-Lou, Ling, Edmund, James, Sam, McDonald, Keith and Hugall, Andrew F. (2002) Phylogeny of the Megascolecidae and Crassiclitellata (Annelida, Oligochaeta): combined versus partitioned analysis using nuclear (28S) and mitochondrial (12S, 16S) rDNA. Zoosystema, 24 4: 707-734. 189 5
Mollaret, Isabelle, Jamieson, Barrie G. M. and Justine, Jean-Lou (2000) Phylogeny of the Monopisthocotylea and Polyopisthocotylea (Platyhelminthes) inferred from 28S rDNA sequences. International Journal for Parasitology, 30 2: 171-185. doi:10.1016/S0020-7519(99)00197-6 164   50 Cited 52 times in Scopus52 0
Skevington, J. H. and Yeates, D. K. (2000) Phylogeny of the Syrphoidea (Diptera) infered from mtDNA sequences and morphology with particular reference to classification of the Pipunculidae (Diptera). Molecular Phylogenetics and Evolution, 16 2: 212-224. doi:10.1006/mpev.2000.0787 32   42 Cited 43 times in Scopus43 0
Houlden, B. A., Costello, B. H., Sharkey, D., Fowler, E. V., Melzer, A., Ellis, W., Carrick, F. N., Baverstock, P. R. and Elphinstone, M.S. (1999) Phylogeographic differentiation in the mitochondrial control region in the koala, Phascolarctos cinereus (Goldfuss 1817). Molecular Ecology, 8 6: 999-1011. doi:10.1046/j.1365-294x.1999.00656.x 110   46 3
Pope, L. C., Estoup, A. and Moritz, C. C. (2000) Phylogeography and population structure of the ecotonal marsupial, Bettongia tropica, determined using mtDNA and microsatellites. Molecular Ecology, 9 12: 2041-2054. doi:10.1046/j.1365-294X.2000.01110.x 102   67 Cited 69 times in Scopus69 0
Worheide, G., Degnan, B. M., Hopper, J. L. and Reitner, J. (2002). Phylogeography and taxonomy of the Indo-Pacific reef cave dwelling coralline demosponge Astrosclera 'willeyana': new data from nuclear internal transcribed spacer sequences. In: Proceedings of the Ninth International Coral Reef Symposium. Ninth International Coral Reef Symposium, Bali, Indonesia, (339-345). 23 - 27 October 2000. 118  
Vargas, Sarah M., Jensen, Michael P., Ho, Simon Y. W., Mobaraki, Asghar, Broderick, Damien, Mortimer, Jeanne A., Whiting, Scott D., Miller, Jeff, Prince, Robert I. T., Bell, Ian P., Hoenner, Xavier, Limpus, Colin J., Santos, Fabricio R. and Fitzsimmons, Nancy N. (2016) Phylogeography, genetic diversity, and management units of hawksbill turtles in the indo-pacific. Journal of Heredity, 107 3: 199-213. doi:10.1093/jhered/esv091     1 0 14
Nicholls, J. A. and Austin, J. J. (2005) Phylogeography of an east Australian wet-forest bird, the satin bowerbird (Ptilonorhynchus violaceus), derived from mtDNA, and its relationship to morphology. Molecular Ecology, 14 5: 1485-1496. doi:10.1111/j.1365-294X.2005.02544.x 118   36 Cited 37 times in Scopus37 0
Degnan, Sandie M. and Moritz, Craig (1992) Phylogeography of mitochondrial DNA of two species of white-eye in Australia. Auk, 109 4: 800-811. 97   34
Bourjea, J., Lapegue, S., Gagnevin, L., Broderick, D., Mortimer, J..A., Ciccione, S., Roos, D., Taquet, C. and Grizel, H. (2007) Phylogeography of the green turtle, Chelonia mydas, in the Southwest Indian Ocean. Molecular Ecology, 16 1: 175-186. doi:10.1111/j.1365-294X.2006.03122.x 37   47 Cited 46 times in Scopus46 0
Macqueen, Peggy, Goldizen, Anne W., Austin, Jeremy J. and Seddon, Jennifer M. (2011) Phylogeography of the pademelons (Marsupialia: Macropodidae: Thylogale) in New Guinea reflects both geological and climatic events during the Plio-Pleistocene. Journal of Biogeography, 38 9: 1732-1747. doi:10.1111/j.1365-2699.2011.02522.x 82   11 Cited 11 times in Scopus11 0
Hoskin, C. J. and McCallum, H. (2007) Phylogeography of the parasitic fly Batrachomyia in the Wet Tropics of north-east Australia, and susceptibility of host frog lineages in a mosaic contact zone. Biological Journal of The Linnean Society, 92 3: 593-603. doi:10.1111/j.1095-8312.2007.00862.x 53   2 Cited 3 times in Scopus3 0
Chenoweth, S. F., Hughes, J. M. and Connolly, R. C. (2002) Phylogeography of the pipefish, Urocampus carinirostris, suggests secondary intergradation of ancient lineages. Marine Biology, 141 3: 541-547. doi:10.1007/s00227-002-0836-3 91   15 Cited 16 times in Scopus16 0
Miller, L. J. and Allsopp, P. G. (2005) Phylogeography of the scarab beetle Antitrogus parvulus Britton (Coleoptera : Scarabaeidae) in south-eastern Queensland, Australia. Australian Journal of Entomology, 44 1: 29-36. doi:10.1111/j.1440-6055.2005.00416.x 113   4 Cited 4 times in Scopus4 0
Wörheide, Gert, Hooper, John N. A. and Degnan, Bernard M. (2002) Phylogeography of western Pacific Leucetta 'chagosensis' (Porifera: Calcarea) from ribosomal DNA sequences: implications for population history and conservation of the Great Barrier Reef World Heritage Area (Australia). Molecular Ecology, 11 9: 1753-1768. doi:10.1046/j.1365-294X.2002.01570.x 227   79 Cited 82 times in Scopus82 0
Riegler, M., Daxboeck, S. and Stauffer, C. (2002). Phylogeography of Wolbachia infections in the European cherry fruit fly. In: Second International Wolbachia Conference. Second International Wolbachia Conference, Kolymbari, Crete, Greece, (19-19). 9-15th July, 2002. 76  
Stocker, Ann J., Rusuwa, Bosco B., Blacket, Mark J., Frentiu, Francesca D., Sullivan, Mitchell, Foley, Bradley R., Beatson, Scott, Hoffman, Ary A. and Chenoweth, Stephen F. (2012) Physical and linkage maps for Drosophila serrata, a model species for studies of clinal adaptation and sexual selection. G3: Genes, Genomes, Genetics, 2 2: 287-297. doi:10.1534/g3.111.001354 66 2 3 Cited 3 times in Scopus3 0
Chollett, Iliana, Mumby, Peter J., Muller-Karger, Frank E. and Hu, Chuanmin (2012) Physical environments of the Caribbean Sea. Limnology and Oceanography, 57 4: 1233-1244. doi:10.4319/lo.2012.57.4.1233 168 1 23 Cited 23 times in Scopus23 0
Lowe, Katrin, FitzGibbon, Sean, Seebacher, Frank and Wilson, Robbie S. (2010) Physiological and behavioural responses to seasonal changes in environmental temperature in the Australian spiny crayfish Euastacus sulcatus. Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, 180 5: 653-660. doi:10.1007/s00360-010-0445-2 157   4 Cited 4 times in Scopus4 0

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